prot_H-paniculata_contig2313.6223.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2313.6223.1
Unique Nameprot_H-paniculata_contig2313.6223.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length729
Homology
BLAST of mRNA_H-paniculata_contig2313.6223.1 vs. uniprot
Match: D8LK34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK34_ECTSI)

HSP 1 Score: 655 bits (1689), Expect = 1.530e-221
Identity = 430/751 (57.26%), Postives = 507/751 (67.51%), Query Frame = 0
Query:    2 VDLLAALRRPLQRLLHDCSFLQWDNVALFVDGGATEATRWAGGLGFLLEELGISLVFDLQLFTPGRGRIARAQSAKGVTRGIFLITTFVWDVEGAVLNAAKTYGLTEVMVACSVSEEAHACHPHATHLSEEADGRVSFKDVSQQLNVSLVRMLKIEAQSVAASLRYRSSGEDAINNRDDGDFHSSTLPXXXXXXXRQPLHPSDVLVTVFHSPLHVGCFFQAPPFTNSSTGSSYSGAVEVAAAGDGCH---CSAFTLASPVCAKVFPLRRCDLEGGXXXXXXXXXXXXXXVGGSKGRGDGLDGGLLSAEDVPKEERLRYRLLAHALSETLWDQLQLDVGGVGGVFTLGGTSHLIGTTLAAAVGGSSQHSLCRHTMIPYVGTN-----SSGLNPRAPSATEEPYQRRRQASVVIVDRTLDLSAAASRGGSLLQRVMSSLPRAGSTPPSXXXXXXNTSSYLPSASYSSPSLSSRSQAQWSPSASAHQQDVAVILPALAPGLGLPSSCSPFYSLAEAGGLSGKGEXXXXXXRAKGEP-QLEAMKALAGFPWPAPTSLCHPTG----AGRLVHAMSCLGEEEGQAALVAALERCVSENGCVPPPRKRRGSGASIMALATSLAKGSSRAGGPTGDQVCLRNRGIIQVALAAMEAYQRTSTLAGSRWSETVASERVQRQELRDGATAHVVLEQLCASL------EASSSAXXXXXXXXXXXXGQG----CAHDALVLALRGVSLAGGSIGAEEAKSFR 729
            VDLLAA RRPL+RLLH+CSF QW+N+ALF+D GATEA RWAGGLGF+LEELGIS + DLQ F PGR   A  +S +G+TRGIFL+T FVWDVEGAVL+AA TYGLTEV +ACSVSEEAHACH HA H+SEE  GR SF  VSQQL VSL RMLKI+AQS ++S R R S     +        + T+                VLVT+ HSPLHVGCFFQA     S  GSS    V+      G H   CSAF+LASP CA+VFPLRRCD EG XXXXXXXXXXXXXX             G +SAE+VP+ ERLRYRLLAH L E LWDQL LDV G GGVFTLG TS LIGTT+AA      + SL R     + G       SSG      S    P  RR +ASVV++DR LD++AAAS GGSLLQR++SS+ R G TP          +S +P+     PS        WSPSA+AHQQDV V+LP L PGLGLP+  +      E  G      XXXXXX   G+P +L AMKAL+GFPW AP SLCH  G    A  +VHAM+C GEEEGQAAL++ALE+CVS+NGCVPPPRKRRG G+SIMAL TSLA+G+ RAGG +GD+VC ++RG++QVALAAMEA+QRTS+LAGS WSETVA+ERVQ ++LRDG+T  VV+EQLCA+L      + SSS+            G       A +AL+LALRGVSLAG SIGA++A SFR
Sbjct:    3 VDLLAASRRPLERLLHECSFSQWENIALFLDEGATEAVRWAGGLGFVLEELGISHILDLQAFAPGRSPPAVPES-EGLTRGIFLVTNFVWDVEGAVLHAACTYGLTEVALACSVSEEAHACHSHAAHISEETGGRASFAVVSQQLKVSLERMLKIKAQS-SSSGRRRFSKPSPSSTXXXXXXXTQTIATEAAPHLAANAVDPTVLVTIKHSPLHVGCFFQASTTITSGGGSSVD--VDQPLDSQGQHQKGCSAFSLASPACARVFPLRRCDWEGXXXXXXXXXXXXXXXXXXXXXXXXXETRGHVSAEEVPRGERLRYRLLAHTLVEALWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAVAEDLKRVSLERPAPPGFGGEGGADSASSGRGGGFGSDGAGPAARR-EASVVLIDRNLDVAAAASHGGSLLQRILSSIDRTG-TP----------NSAVPAT----PSSPEAVAIDWSPSAAAHQQDVGVVLPMLTPGLGLPARAAA----VERSGXXXXXXXXXXXXXXXGKPPRLLAMKALSGFPWRAPPSLCHSGGDAGAAAGVVHAMACHGEEEGQAALISALEKCVSDNGCVPPPRKRRGMGSSIMALVTSLARGNPRAGGLSGDRVCFKSRGVLQVALAAMEAHQRTSSLAGSGWSETVAAERVQLRQLRDGSTVDVVMEQLCATLNRAPPMDFSSSSSSPPGGTASLGAGAARTGSSAREALLLALRGVSLAGESIGAQDATSFR 729          
BLAST of mRNA_H-paniculata_contig2313.6223.1 vs. uniprot
Match: A0A1V9Z7M6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7M6_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.170e-5
Identity = 54/193 (27.98%), Postives = 78/193 (40.41%), Query Frame = 0
Query:  245 DGCHCSAFTLASPVCAKVFPLRRCDLEGGXXXXXXXXXXXXXXVGGSKGRGDGLDGGLLSAEDVPKEERLRYRLLAHALSETLWDQLQLDVGGVGGVFTLGGTSHLIGTTLAAAVGGSSQHSLCRHTMIPYVGTNSSGLNPRAPSATEEPYQRRRQASVVIVDRTLDLSAAASRGGSLLQRVMSSLPRAGSTP 437
            DG   S F L  P CA  FP+ RCD++                               +   D+P++ R  ++LLA  L   L  Q QL V     ++ +GGTS  +G            H+L  H            LN           ++ R AS++++DRTLDL+   S   SLL R++  LPRA + P
Sbjct:  165 DGADPSLFVLTHPQCAAAFPIMRCDVKHPSEPWKHVNE--------------------IPPADIPEDNRKTFKLLAQVLGGILM-QWQLQVNEH--IYAMGGTSLKVG------------HTLLHH------------LNELQGEYNMHDVKQWRSASLILIDRTLDLATPMSHQFSLLDRILQQLPRATAAP 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2313.6223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK34_ECTSI1.530e-22157.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1V9Z7M6_9STRA3.170e-527.98Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001619Sec1-like proteinPANTHERPTHR11679VESICLE PROTEIN SORTING-ASSOCIATEDcoord: 315..462
IPR001619Sec1-like proteinPANTHERPTHR11679VESICLE PROTEIN SORTING-ASSOCIATEDcoord: 618..718
NoneNo IPR availablePANTHERPTHR11679:SF71SEC1 FAMILY DOMAIN-CONTAINING PROTEIN 2coord: 315..462
NoneNo IPR availablePANTHERPTHR11679:SF71SEC1 FAMILY DOMAIN-CONTAINING PROTEIN 2coord: 618..718

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2313contigH-paniculata_contig2313:190..14025 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2313.6223.1mRNA_H-paniculata_contig2313.6223.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2313 190..14141 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2313.6223.1 ID=prot_H-paniculata_contig2313.6223.1|Name=mRNA_H-paniculata_contig2313.6223.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=729bp
MVDLLAALRRPLQRLLHDCSFLQWDNVALFVDGGATEATRWAGGLGFLLE
ELGISLVFDLQLFTPGRGRIARAQSAKGVTRGIFLITTFVWDVEGAVLNA
AKTYGLTEVMVACSVSEEAHACHPHATHLSEEADGRVSFKDVSQQLNVSL
VRMLKIEAQSVAASLRYRSSGEDAINNRDDGDFHSSTLPPNHHHHHRQPL
HPSDVLVTVFHSPLHVGCFFQAPPFTNSSTGSSYSGAVEVAAAGDGCHCS
AFTLASPVCAKVFPLRRCDLEGGGGGGAGAALFAAAAVGGSKGRGDGLDG
GLLSAEDVPKEERLRYRLLAHALSETLWDQLQLDVGGVGGVFTLGGTSHL
IGTTLAAAVGGSSQHSLCRHTMIPYVGTNSSGLNPRAPSATEEPYQRRRQ
ASVVIVDRTLDLSAAASRGGSLLQRVMSSLPRAGSTPPSSSNSSSNTSSY
LPSASYSSPSLSSRSQAQWSPSASAHQQDVAVILPALAPGLGLPSSCSPF
YSLAEAGGLSGKGEGGGGGGRAKGEPQLEAMKALAGFPWPAPTSLCHPTG
AGRLVHAMSCLGEEEGQAALVAALERCVSENGCVPPPRKRRGSGASIMAL
ATSLAKGSSRAGGPTGDQVCLRNRGIIQVALAAMEAYQRTSTLAGSRWSE
TVASERVQRQELRDGATAHVVLEQLCASLEASSSASQTRGGGGGGGDGQG
CAHDALVLALRGVSLAGGSIGAEEAKSFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001619Sec1-like