prot_H-paniculata_contig231.6212.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig231.6212.1
Unique Nameprot_H-paniculata_contig231.6212.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length665
Homology
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Match: D7G4K9_ECTSI (Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K9_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 1.510e-82
Identity = 182/343 (53.06%), Postives = 205/343 (59.77%), Query Frame = 0
Query:  334 LPQLCDGDSLRHSLGFLVAQELARFAMSSTAAREFALAHASSEICRRYFPLQLGPRESPASQAHHRRLAFGTGYNPSPSSADGTNASAGAAESGSPGEENRGYDSAVSISPPTFPPSRPTPPREGVSTSGNGFSVGVTCRGRVGSGSGSHCRRV--------RARGGSWGGLVRCAG---GNAKLALPALYHLEACGDLLLGQLKTLPRLDVFQTLQSRSVLGNTQFLTPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMTTSEAIHICDSQYNPSQVHSTFNIVVSNTQEPTTRTVPATAAEILNR 665
            LP L D D+LRHSLGFL A ELARFA++STAAR    +HA+  IC  Y  ++LG RE   S +  R L FG                                                                 ++    +G GSG    R         R   G  GG  + A     +  LAL AL+HLE CGDLL+ QLKTLPRLD+FQ+LQSR+VLG TQFLT HMRAVLVDW VEVA QFRLSTIALHA +S+LDVCL KVAVPRCRLQLLGVVCAMIQ+QAGGGCQVM TSEAIHICDSQYNPSQVHSTFN+VVS TQE   R VPAT AEIL+R
Sbjct:  106 LPNL-DFDTLRHSLGFLRAAELARFALASTAARAVVSSHAAVMICEGYSEIRLGAREPSLSSSSRRLLPFGXXXXX---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISNSDLLGQGSGGRTVRPWSVDEGSPRGGPGQGGGPAKAARYRRNDQHLALRALHHLECCGDLLIRQLKTLPRLDIFQSLQSRAVLGPTQFLTAHMRAVLVDWCVEVACQFRLSTIALHATISSLDVCLTKVAVPRCRLQLLGVVCAMIQTQAGGGCQVMNTSEAIHICDSQYNPSQVHSTFNVVVSITQEAMGRAVPATVAEILHR 426          
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Match: A0A6H5JEY8_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY8_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 7.580e-75
Identity = 176/332 (53.01%), Postives = 205/332 (61.75%), Query Frame = 0
Query:  334 LPQLCDGDSLRHSLGFLVAQELARFAMSSTAAREFALAHASSEICRRYFPLQLGPRESPASQAHHRRLAFGTGYNPSPSSADGTNASAGAAESGSPGEENRGYDSAVSISPPTFPPSRPTPPREGVSTSGNGFSVGVTCRGRVGSGSGSHCRRVRARGGSWGGLVRCAGGNAKLALPALYHLEACGDLLLGQLKTLPRLDVFQTLQSRSVLGNTQFLTPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMTTSEAIHICDSQYNPSQVHSTFNIVVSNTQEPTTRTVPATAAEILNR 665
            LP L D D+LRHSLGFL A +LARFA++STAAR    +HA+  I   Y  +++G RE   S +  R L FG      P++A                                          + ++  G G +V       V  GS    R    +GG      RC   +  L L AL+HLE CGDLL+ QLKTLPRLD+FQ++QS +VLG TQFLT HMRAVLVDW VEVA QFRLSTIALHA +S+LDVCL KVAVPRCRLQLLGVVCAMIQ+QAGGG QVM T EAIHICDSQY PSQVHSTFN+VVS TQE   R VPAT AEIL+R
Sbjct:  237 LPDL-DFDTLRHSLGFLRAADLARFALASTAARAIVSSHAAVIIREGYSEIRIGAREPSLSSSSARLLPFG-----GPAAAXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLLAQGGGGRTVRPWL---VDEGS---PRGGPVQGGGPAKAARCRRNDQHLVLRALHHLECCGDLLIRQLKTLPRLDMFQSVQSGAVLGPTQFLTAHMRAVLVDWCVEVACQFRLSTIALHATISSLDVCLTKVAVPRCRLQLLGVVCAMIQTQAGGGGQVMNTPEAIHICDSQYTPSQVHSTFNVVVSITQEAMGRAVPATVAEILHR 551          
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Match: UPI00201E8888 (cyclin-F-like isoform X1 n=3 Tax=Haliotis TaxID=6452 RepID=UPI00201E8888)

HSP 1 Score: 72.0 bits (175), Expect = 2.440e-9
Identity = 54/136 (39.71%), Postives = 72/136 (52.94%), Query Frame = 0
Query:  504 NAKLALPALYHLEACGDLLLGQLKTLPRLDVFQTLQ---SRSVLGNTQFLTPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMTTSEAIHICDSQYNPSQV 636
            NA+L L   Y     G +   Q+    R +VFQT     +     N + LTP MR +LVDW+VEVA     ST+ LHAAV+ +D  L    VPR +LQLLGV   +I S+  G   ++T  EA  + DS Y+   V
Sbjct:  267 NARLYLCKYYASGKYGGISRSQVAAFLR-EVFQTTSPTGTHKTFQNHRDLTPSMRYILVDWLVEVAGMKDFSTLTLHAAVNLVDRFLQVHTVPRSQLQLLGVAAMVICSRFLGK-DIITIREAAWLTDSTYSYEDV 400          
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Match: A0A2V0PPT4_9CHLO (Cyclin-A2-like n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PPT4_9CHLO)

HSP 1 Score: 68.2 bits (165), Expect = 1.700e-8
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 0
Query:  550 LTPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMTTSEAIHICDSQYNPSQV 636
            +TPHMRA+LVDW+VEVA ++RL +  LH  ++ LD  L KV + R +LQL G+ C    S+        T  E   I D+ Y+P Q+
Sbjct:  130 MTPHMRAILVDWLVEVALEYRLCSDTLHLTIALLDRFLSKVPISRDQLQLAGIACMWAASKYEE-IYAPTAREFCFITDNTYSPEQL 215          
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Match: A0A2T7PY76_POMCA (Cyclin-F n=3 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PY76_POMCA)

HSP 1 Score: 67.8 bits (164), Expect = 4.900e-8
Identity = 51/135 (37.78%), Postives = 70/135 (51.85%), Query Frame = 0
Query:  505 AKLALPALYHLEACGDLLLGQLKTLPRLDVFQT---LQSRSVLGNTQFLTPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMTTSEAIHICDSQYNPSQV 636
            A++ L   Y L   G +   Q  +  + +VFQ+   L    +    + LTP MR +LVDW+VEVA     ST+ LH AVS +D  L    VPR +LQLLGV  AM+ S    G  ++T  EA  + D+ Y    V
Sbjct:  234 ARMILCHCYSLRQFGGIAQTQAFSFSQ-EVFQSSSPLGFLHIFSGIRDLTPSMRYILVDWLVEVACMKNFSTLTLHNAVSIVDHFLAVRDVPRSKLQLLGVS-AMVISSRYLGTDIVTIREAAWLTDNTYKYEDV 366          
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Match: A0A540MST0_MALBA (B-like cyclin n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MST0_MALBA)

HSP 1 Score: 61.6 bits (148), Expect = 1.010e-7
Identity = 47/119 (39.50%), Postives = 65/119 (54.62%), Query Frame = 0
Query:  540 SRSVLGNTQF-LTPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMTTSEAIHICDSQYNPSQVHSTFNIVV----SNTQEPTTR 653
            S S +G  Q  ++P MR +LVDW+VEVA +++L T  L+  VS LD  L   AV R +LQLLGV C +I S+    C      +  +I D+ Y   +V      VV    S+T  PTT+
Sbjct:    8 SPSYMGRVQNDISPKMRGILVDWLVEVAEEYKLVTDTLYLTVSYLDRYLSSYAVSRSKLQLLGVSCMIIASKYEEICPPHV-EDFCYITDNTYIVEEVLEMERDVVKFLNSDTGPPTTK 125          
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Match: A0A098VRM1_9MICR (Putative cyclin superfamily protein (Fragment) n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VRM1_9MICR)

HSP 1 Score: 60.1 bits (144), Expect = 1.160e-7
Identity = 33/90 (36.67%), Postives = 52/90 (57.78%), Query Frame = 0
Query:  546 NTQFLTPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMTTSEAIHICDSQYNPSQ 635
            N + +TP MR++LVDW+VEV   + LS  +LH A++ +D  L    +P+  LQLLG+ C +I S+     + M   +A+ +C   Y   Q
Sbjct:    3 NQKEITPKMRSILVDWLVEVVDDYELSFESLHLAINYVDRYLSAKVLPKIFLQLLGISCLLISSKFVER-EGMKIKDAVDVCSGCYTQEQ 91          
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Match: A0A060C842_9BACT (Cyclin_N (Fragment) n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A060C842_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 4.010e-7
Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 0
Query:  550 LTPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLLGVVCAMIQSQ 610
            + P MR++LVDW+VEVA ++RL + +L  AV+ LD  L +  VPR RLQL GV CA++ ++
Sbjct:   35 INPLMRSILVDWLVEVAQEYRLCSDSLFLAVALLDRYLSRRRVPRARLQLAGVACALVAAK 95          
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Match: A0A1W0A744_9STRA (Cyclin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A744_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.770e-7
Identity = 34/91 (37.36%), Postives = 54/91 (59.34%), Query Frame = 0
Query:  541 RSVLGNTQFLTPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLLGVVCAMIQSQAGGGCQVMTTSEAIHICDSQY 631
            +  LG    +T  MR +L+DW+VEVA ++++S  ALH A+S +D CL ++A+ R  LQL+G  C M+  +     Q  T  + ++I D  Y
Sbjct:  131 KDYLGPRTDITARMRTILLDWLVEVAEEYKVSAKALHLAISLVDRCLSEMAITRGELQLMGCACMMVACKYEE-VQCPTIEDFVYISDHTY 220          
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Match: A0A2P6NUP0_9EUKA (Cyclin-A1-2 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NUP0_9EUKA)

HSP 1 Score: 63.5 bits (153), Expect = 5.140e-7
Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 0
Query:  548 QFLTPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLLGVVCAMIQSQ 610
            Q LTP MR++L+DW+VEVA +F+L++  L  AV+ +D  L   +VP+ +LQLLGV C MI ++
Sbjct:  148 QELTPKMRSILIDWLVEVAIEFKLNSETLFLAVNYIDRFLSTQSVPKSKLQLLGVTCMMIAAK 210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig231.6212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4K9_ECTSI1.510e-8253.06Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JEY8_9PHAE7.580e-7553.01Cyclin N-terminal domain-containing protein n=1 Ta... [more]
UPI00201E88882.440e-939.71cyclin-F-like isoform X1 n=3 Tax=Haliotis TaxID=64... [more]
A0A2V0PPT4_9CHLO1.700e-842.53Cyclin-A2-like n=1 Tax=Raphidocelis subcapitata Ta... [more]
A0A2T7PY76_POMCA4.900e-837.78Cyclin-F n=3 Tax=Pomacea canaliculata TaxID=400727... [more]
A0A540MST0_MALBA1.010e-739.50B-like cyclin n=1 Tax=Malus baccata TaxID=106549 R... [more]
A0A098VRM1_9MICR1.160e-736.67Putative cyclin superfamily protein (Fragment) n=1... [more]
A0A060C842_9BACT4.010e-749.18Cyclin_N (Fragment) n=1 Tax=uncultured bacterium T... [more]
A0A1W0A744_9STRA4.770e-737.36Cyclin n=1 Tax=Thraustotheca clavata TaxID=74557 R... [more]
A0A2P6NUP0_9EUKA5.140e-749.21Cyclin-A1-2 n=1 Tax=Planoprotostelium fungivorum T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 536..637
e-value: 1.4E-13
score: 50.7
NoneNo IPR availableGENE3D1.10.472.10coord: 541..644
e-value: 1.7E-20
score: 75.3
IPR028857Cyclin-F, metazoanPANTHERPTHR10177:SF252CYCLIN-Fcoord: 539..636
IPR039361CyclinPANTHERPTHR10177CYCLINEcoord: 539..636
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 532..637

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig231contigH-paniculata_contig231:709..12552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig231.6212.1mRNA_H-paniculata_contig231.6212.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig231 709..12738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig231.6212.1 ID=prot_H-paniculata_contig231.6212.1|Name=mRNA_H-paniculata_contig231.6212.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=665bp
MAGDQNRKRSRSSSNDIGAQLDSGNLEGALPDPQQHQPPLSRRRGQTTQA
RVGRANGPGGLGSLISLVVETVASVFGRGGGGGTGREGFQHSQRRSVSGS
DVTVAAADSRRGSASSLPPGSQEDSAAVSRFAPVGPCPLSSPAGSHNLGG
HMSSSVLLLPAPSPSRSAITPKRQAVSQEPSDENGAGSSNTNNNSGAVGA
AGTGVGVGGGRTREDAPVTPAAAAAAAAAAAAATVAAANAHAHAHAHAHA
VPEDERLCARRILGQQKTSTNVRLSQADGRSDSSDGKQSAPAAGTQQAVA
GCDRRGVSGGVRNTAVGMVLSDDAARLAVQDNGLPQLCDGDSLRHSLGFL
VAQELARFAMSSTAAREFALAHASSEICRRYFPLQLGPRESPASQAHHRR
LAFGTGYNPSPSSADGTNASAGAAESGSPGEENRGYDSAVSISPPTFPPS
RPTPPREGVSTSGNGFSVGVTCRGRVGSGSGSHCRRVRARGGSWGGLVRC
AGGNAKLALPALYHLEACGDLLLGQLKTLPRLDVFQTLQSRSVLGNTQFL
TPHMRAVLVDWMVEVAFQFRLSTIALHAAVSALDVCLGKVAVPRCRLQLL
GVVCAMIQSQAGGGCQVMTTSEAIHICDSQYNPSQVHSTFNIVVSNTQEP
TTRTVPATAAEILNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR028857CCNF_metazoan
IPR039361Cyclin
IPR036915Cyclin-like_sf