prot_H-paniculata_contig23093.6210.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23093.6210.1
Unique Nameprot_H-paniculata_contig23093.6210.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length250
Homology
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Match: D7FS68_ECTSI (RNA-splicing ligase RtcB homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS68_ECTSI)

HSP 1 Score: 440 bits (1132), Expect = 1.850e-151
Identity = 220/249 (88.35%), Postives = 233/249 (93.57%), Query Frame = 0
Query:    1 MIHSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDYLGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIAKVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMGTCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKGISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG 249
            MIHSGSRGLGHQVATDALV MEAAMARD I+ NDRQLACAKINSQEGQDYL GMAAAANYAWVNRA MTFLTR+AF+K+FGKT +ELDMH+VYDVSHNIAKVEQH+V  +LKTLLVHRKGATRAFPPHHPL+PVDYQF GQPVIVGGTMGTCSYVLTGTQKGM ETFGSTCHGAGRAKSRNESR+TL YE VL GL +KGISIRVASPKLVMEEAPESYKDVTEVVNTCH+A +S RAVKLRPIAVIKG
Sbjct:  256 MIHSGSRGLGHQVATDALVLMEAAMARDNIDINDRQLACAKINSQEGQDYLAGMAAAANYAWVNRAMMTFLTRRAFSKKFGKTAEELDMHVVYDVSHNIAKVEQHIVDGDLKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVIVGGTMGTCSYVLTGTQKGMDETFGSTCHGAGRAKSRNESRKTLDYEAVLGGLEKKGISIRVASPKLVMEEAPESYKDVTEVVNTCHDAGVSMRAVKLRPIAVIKG 504          
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Match: A0A482S0H0_9ARCH (tRNA-splicing ligase RtcB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0H0_9ARCH)

HSP 1 Score: 418 bits (1075), Expect = 5.940e-146
Identity = 207/249 (83.13%), Postives = 227/249 (91.16%), Query Frame = 0
Query:    1 MIHSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDYLGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIAKVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMGTCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKGISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG 249
            MIHSGSRGLGHQVATDAL  MEAAM RD I TNDRQLACA+INS+EGQDYL  MAAAANYAWVNRA+MTFL RQAFAKQF   P +LDM++VYDVSHNIAKVEQH+V  +LKTLLVHRKG+TRAFPPHHPL+PVDYQFIGQPV++GGTMGTCSYVLTGTQKGM ETFGSTCHGAGRA+SRN+SRR LSY+ VL+ L EKGISIRVASPKLVMEEAPESYKDVT+VV+TCHNA IS + +KLRPIAVIKG
Sbjct:   44 MIHSGSRGLGHQVATDALTAMEAAMVRDHIVTNDRQLACARINSKEGQDYLAAMAAAANYAWVNRASMTFLVRQAFAKQFKVEPDDLDMNVVYDVSHNIAKVEQHLVEGQLKTLLVHRKGSTRAFPPHHPLIPVDYQFIGQPVLIGGTMGTCSYVLTGTQKGMEETFGSTCHGAGRAQSRNKSRRNLSYQDVLNSLAEKGISIRVASPKLVMEEAPESYKDVTQVVDTCHNAGISNKCIKLRPIAVIKG 292          
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Match: A0A7S3M965_9STRA (RNA-splicing ligase RtcB homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M965_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 4.410e-142
Identity = 204/249 (81.93%), Postives = 226/249 (90.76%), Query Frame = 0
Query:    1 MIHSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDYLGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIAKVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMGTCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKGISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG 249
            MIHSGSRGLGHQVATDAL  MEAAM RDK+ TNDRQLACA+INS EGQDYL GMAAAANYAWVNR++MTFL RQAFAKQF + P +LDMH+VYDVSHNIAKVEQHMV  ++KTLLVHRKG+TRAFPPHHPL+PVDYQFIGQPV++GGTMGTCSYVLTGTQ GM ETFGSTCHGAGRA+SRN SRRTL Y+ VLD L  +GI+IRVASPKLVMEEAPESYKDVT+VV+TCH A IS++ +KLRPIAVIKG
Sbjct:  276 MIHSGSRGLGHQVATDALTAMEAAMTRDKLVTNDRQLACARINSPEGQDYLAGMAAAANYAWVNRSSMTFLVRQAFAKQFNREPDDLDMHVVYDVSHNIAKVEQHMVDGKMKTLLVHRKGSTRAFPPHHPLIPVDYQFIGQPVLIGGTMGTCSYVLTGTQTGMDETFGSTCHGAGRAQSRNASRRTLEYQEVLDKLASQGIAIRVASPKLVMEEAPESYKDVTQVVDTCHAAGISKKCIKLRPIAVIKG 524          
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Match: UPI0009E47FBE (tRNA-splicing ligase RtcB homolog n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E47FBE)

HSP 1 Score: 408 bits (1049), Expect = 8.200e-140
Identity = 198/249 (79.52%), Postives = 225/249 (90.36%), Query Frame = 0
Query:    1 MIHSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDYLGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIAKVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMGTCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKGISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG 249
            MIHSGSRGLGHQVATDALV ME AM RDKI+ NDRQLACA+I+SQEG+DYL GMAAAANYAWVNR+TMTFLTRQAF K F  TP +LDMH++YDVSHNIAK+E+HM+  E KTLLVHRKG+TRAFPPHHPL+PVDYQ  GQPV++GGTMGTCSYVLTGT+KGM +TFG+TCHGAGRA SR +SRR L Y+ VLD L+ KGISIRVASPKLVMEEAPESYK+VT+VVNTCH+A IS++A+KLRPIAVIKG
Sbjct:  190 MIHSGSRGLGHQVATDALVAMEKAMKRDKIDVNDRQLACARIHSQEGEDYLKGMAAAANYAWVNRSTMTFLTRQAFGKVFKSTPDDLDMHVIYDVSHNIAKIEEHMLDGEQKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEKGMKQTFGTTCHGAGRALSRAKSRRNLDYQEVLDALKSKGISIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISQKAIKLRPIAVIKG 438          
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Match: K8FAV9_9CHLO (RNA-splicing ligase RtcB homolog n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FAV9_9CHLO)

HSP 1 Score: 411 bits (1056), Expect = 1.410e-139
Identity = 201/249 (80.72%), Postives = 227/249 (91.16%), Query Frame = 0
Query:    1 MIHSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDYLGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIAKVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMGTCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKGISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG 249
            MIHSGSRGLGHQVATDALV+ME AMA+D +E NDRQLACA+INSQEG+DYL  MA AANYAWVNR +MTFL RQAFAK F KT ++LDMH+VYDVSHNIAK+E+H+V  ELKTLLVHRKG+TRAFPPHHPL+PVDYQ+ GQPV+VGGTMGTCSYVLTGT+KGM ETFGSTCHGAGRA+SR+ SR+ LSYE VL+ L+ KGISIRVASPKLVMEEAPESYKDVTEVV+TCH+A IS++ VKLRPIAVIKG
Sbjct:  282 MIHSGSRGLGHQVATDALVEMEKAMAKDGLELNDRQLACARINSQEGKDYLAAMACAANYAWVNRQSMTFLCRQAFAKTFNKTAEQLDMHVVYDVSHNIAKIEEHIVDGELKTLLVHRKGSTRAFPPHHPLIPVDYQYTGQPVLVGGTMGTCSYVLTGTEKGMHETFGSTCHGAGRARSRHNSRQKLSYEQVLENLKTKGISIRVASPKLVMEEAPESYKDVTEVVDTCHDAGISKKCVKLRPIAVIKG 530          
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Match: RTCB_OSTTA (RNA-splicing ligase RtcB homolog n=6 Tax=Ostreococcus TaxID=70447 RepID=RTCB_OSTTA)

HSP 1 Score: 410 bits (1053), Expect = 2.500e-139
Identity = 198/249 (79.52%), Postives = 223/249 (89.56%), Query Frame = 0
Query:    1 MIHSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDYLGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIAKVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMGTCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKGISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG 249
            MIHSGSRGLGHQVATD+L  ME AM RD IE NDRQLACA+I+SQEGQDYL  MA AANYAWVNR++MTFL RQAFAK FGK P ELDMH+VYDVSHNIAK E+HMV  E+KTLLVHRKG+TRAFPPHHPL+PVDYQ+ GQPV++GGTMGTCSY+LTGT+KGM +TFGSTCHGAGRA+SRN+SR  L YE VL+ L+ KGI+IRVASPKLVMEEAPESYKDVTEVVNTCH+A IS++ VKLRPIAV+KG
Sbjct:  267 MIHSGSRGLGHQVATDSLTAMERAMERDGIEVNDRQLACARISSQEGQDYLAAMACAANYAWVNRSSMTFLCRQAFAKMFGKPPDELDMHVVYDVSHNIAKFEEHMVDGEMKTLLVHRKGSTRAFPPHHPLIPVDYQYTGQPVLIGGTMGTCSYILTGTEKGMRDTFGSTCHGAGRARSRNKSRHVLQYEDVLEKLKTKGIAIRVASPKLVMEEAPESYKDVTEVVNTCHDAGISKKCVKLRPIAVVKG 515          
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Match: E1Z704_CHLVA (RNA-splicing ligase RtcB homolog n=2 Tax=Chlorella clade TaxID=2511126 RepID=E1Z704_CHLVA)

HSP 1 Score: 408 bits (1049), Expect = 4.100e-139
Identity = 200/249 (80.32%), Postives = 223/249 (89.56%), Query Frame = 0
Query:    1 MIHSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDYLGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIAKVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMGTCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKGISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG 249
            MIHSGSRGLGHQVATDALV ME AMARD I TNDRQLACA+I SQEGQDYL  MA AANYAWVNR++MTFL RQAFAK FG TP +LDMH+VYDVSHNIAKVE+H+V  +LKTLLVHRKG+TRAFPPHHPL+PVDYQ  GQPV++GGTMGTCSYVLTGT+KGM ETFGSTCHGAGRA+SRN SR  L Y+ VLD L+ KGI+IRVASPKLVMEEAPESYKDV+EVV+TCH+A IS++ VKLRPIAV+KG
Sbjct:  239 MIHSGSRGLGHQVATDALVGMERAMARDGILTNDRQLACARIGSQEGQDYLTAMACAANYAWVNRSSMTFLCRQAFAKMFGSTPDDLDMHVVYDVSHNIAKVEEHLVDGQLKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEKGMGETFGSTCHGAGRARSRNNSRNKLDYQQVLDALKTKGIAIRVASPKLVMEEAPESYKDVSEVVDTCHSAGISKKTVKLRPIAVVKG 487          
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Match: A0A0C9RGR1_9HYME (Zgc:76871 protein (Fragment) n=4 Tax=Pancrustacea TaxID=197562 RepID=A0A0C9RGR1_9HYME)

HSP 1 Score: 397 bits (1020), Expect = 2.840e-138
Identity = 195/247 (78.95%), Postives = 218/247 (88.26%), Query Frame = 0
Query:    3 HSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDYLGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIAKVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMGTCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKGISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG 249
            HSGSRG GHQVATDALVQME AM RD I+ NDRQLACA INSQEGQDYL  MAAAAN+AWVNR++MTFLTRQAFAKQF   P +LDMH++YDVSHNIAKVE+HMV  ++KTLLVHRKG+TRAFPPHHPL+PVDYQ  GQPV++GGTMGTCSYVLTGT +GM ETFGSTCHGAGRA SR +SRR L ++ VLD L E GISIRVASPKLVMEEAPESYK+VT+VVNTCH A IS++ +KLRPIAVIKG
Sbjct:    1 HSGSRGFGHQVATDALVQMEKAMKRDSIDVNDRQLACAHINSQEGQDYLKSMAAAANFAWVNRSSMTFLTRQAFAKQFEMPPDDLDMHVIYDVSHNIAKVEEHMVDGKMKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTDQGMRETFGSTCHGAGRALSRAKSRRNLDFQQVLDRLHELGISIRVASPKLVMEEAPESYKNVTDVVNTCHAAGISKKCIKLRPIAVIKG 247          
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Match: UPI00187DA5D4 (RNA-splicing ligase RtcB homolog n=1 Tax=Bradysia coprophila TaxID=38358 RepID=UPI00187DA5D4)

HSP 1 Score: 401 bits (1031), Expect = 3.640e-138
Identity = 196/249 (78.71%), Postives = 223/249 (89.56%), Query Frame = 0
Query:    1 MIHSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDYLGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIAKVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMGTCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKGISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG 249
            MIHSGSRG GHQVATDALVQME AM RDKIETNDRQLACA+I S EGQDYL  MAAAAN+AWVNR++MTFLTRQAFAKQF  TP +LDMH++YDVSHN+AK+E+HMV  + KTLLVHRKGATRAFPPHHPL+PVDYQF GQPV+VGGTMGTCSYVLTGT+KGM+ETFGSTCHGAGRA SR +SRR L Y  VL+ ++  GI+IRVASPKLVMEEAPESYK+VT+VV+TCH A IS++ ++LRPIAVIKG
Sbjct:  116 MIHSGSRGFGHQVATDALVQMEKAMKRDKIETNDRQLACARIKSTEGQDYLKAMAAAANFAWVNRSSMTFLTRQAFAKQFKTTPDDLDMHVIYDVSHNVAKIEEHMVDGKQKTLLVHRKGATRAFPPHHPLIPVDYQFTGQPVLVGGTMGTCSYVLTGTEKGMSETFGSTCHGAGRALSRAKSRRNLDYLDVLENMKSLGIAIRVASPKLVMEEAPESYKNVTDVVDTCHAAGISKKCIELRPIAVIKG 364          
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Match: A0A7S0MDZ5_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MDZ5_9CRYP)

HSP 1 Score: 402 bits (1032), Expect = 6.030e-138
Identity = 197/249 (79.12%), Postives = 221/249 (88.76%), Query Frame = 0
Query:    1 MIHSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDYLGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIAKVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMGTCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKGISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG 249
            MIHSGSRGLGHQVATDAL  M+ AMARD+I TNDRQL+CA+I+SQEGQDYL GMAAAANYAWVNR++MTFL RQAFAK F  TP +LDMH+VYDVSHNIAK E+H+V  + K LLVHRKG+TRAFPPHHPL+PVDYQF GQPV++GG+MGTCSYVLTGT KGM ETFGSTCHGAGRA SRN SR  L Y+ VLD L ++GISIRVASPKLVMEEAPESYKDVT+VV+TCH A IS++AVKLRPIAVIKG
Sbjct:  141 MIHSGSRGLGHQVATDALTIMDRAMARDRIATNDRQLSCARIDSQEGQDYLAGMAAAANYAWVNRSSMTFLVRQAFAKAFATTPDDLDMHVVYDVSHNIAKEEEHLVDGKFKRLLVHRKGSTRAFPPHHPLIPVDYQFTGQPVLIGGSMGTCSYVLTGTDKGMVETFGSTCHGAGRALSRNRSRNNLQYQDVLDKLSDQGISIRVASPKLVMEEAPESYKDVTQVVDTCHAAGISKKAVKLRPIAVIKG 389          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23093.6210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS68_ECTSI1.850e-15188.35RNA-splicing ligase RtcB homolog n=2 Tax=Ectocarpu... [more]
A0A482S0H0_9ARCH5.940e-14683.13tRNA-splicing ligase RtcB n=1 Tax=archaeon TaxID=1... [more]
A0A7S3M965_9STRA4.410e-14281.93RNA-splicing ligase RtcB homolog n=1 Tax=Spumella ... [more]
UPI0009E47FBE8.200e-14079.52tRNA-splicing ligase RtcB homolog n=1 Tax=Orbicell... [more]
K8FAV9_9CHLO1.410e-13980.72RNA-splicing ligase RtcB homolog n=1 Tax=Bathycocc... [more]
RTCB_OSTTA2.500e-13979.52RNA-splicing ligase RtcB homolog n=6 Tax=Ostreococ... [more]
E1Z704_CHLVA4.100e-13980.32RNA-splicing ligase RtcB homolog n=2 Tax=Chlorella... [more]
A0A0C9RGR1_9HYME2.840e-13878.95Zgc:76871 protein (Fragment) n=4 Tax=Pancrustacea ... [more]
UPI00187DA5D43.640e-13878.71RNA-splicing ligase RtcB homolog n=1 Tax=Bradysia ... [more]
A0A7S0MDZ5_9CRYP6.030e-13879.12Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036025tRNA-splicing ligase RtcB-like superfamilyGENE3D3.90.1860.10coord: 1..249
e-value: 9.2E-101
score: 340.2
IPR036025tRNA-splicing ligase RtcB-like superfamilySUPERFAMILY103365Hypothetical protein PH1602coord: 1..249
IPR001233tRNA-splicing ligase, RtcBPFAMPF01139RtcBcoord: 1..249
e-value: 1.0E-82
score: 278.6
IPR001233tRNA-splicing ligase, RtcBPANTHERPTHR11118UNCHARACTERIZEDcoord: 1..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23093contigH-paniculata_contig23093:1479..3724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23093.6210.1mRNA_H-paniculata_contig23093.6210.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23093 1479..3736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23093.6210.1 ID=prot_H-paniculata_contig23093.6210.1|Name=mRNA_H-paniculata_contig23093.6210.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bp
MIHSGSRGLGHQVATDALVQMEAAMARDKIETNDRQLACAKINSQEGQDY
LGGMAAAANYAWVNRATMTFLTRQAFAKQFGKTPQELDMHLVYDVSHNIA
KVEQHMVGDELKTLLVHRKGATRAFPPHHPLVPVDYQFIGQPVIVGGTMG
TCSYVLTGTQKGMTETFGSTCHGAGRAKSRNESRRTLSYETVLDGLREKG
ISIRVASPKLVMEEAPESYKDVTEVVNTCHNADISRRAVKLRPIAVIKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036025RtcB-like_sf
IPR001233RtcB