prot_H-paniculata_contig23084.6205.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23084.6205.1
Unique Nameprot_H-paniculata_contig23084.6205.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length254
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23084.6205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 142..169
score: 9.92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23084contigH-paniculata_contig23084:490..1251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23084.6205.1mRNA_H-paniculata_contig23084.6205.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23084 364..1529 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23084.6205.1 ID=prot_H-paniculata_contig23084.6205.1|Name=mRNA_H-paniculata_contig23084.6205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=254bp
MVPVLPKLFYISPISCSILSAGLDWNTPDAFDDTQALLCFDRVRALDSAF
TRVISPLREYMVTRSELVADNAGMFSNLFDRDLRTWTESMTPAFRATLAY
LETGYMSVEAQWATTDGKRSAPMGGSGSGRLAKTNKLTPVVKQNMTCWSW
LKNTCRNSDASCRFIHVAGIGRTEDEVKAARQEREQDGGRGTGVDAGRGP
GAPAGRGRGSASQSLASRRQGEGRGGGSKAGSGAGLAGTRRGLQVRGRSG
VAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH