prot_H-paniculata_contig23075.6200.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23075.6200.1
Unique Nameprot_H-paniculata_contig23075.6200.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length144
Homology
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BLAST of mRNA_H-paniculata_contig23075.6200.1 vs. uniprot
Match: D8LJI6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI6_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 5.330e-15
Identity = 65/68 (95.59%), Postives = 66/68 (97.06%), Query Frame = 0 
Query:   77 DGLRPVCXXXXXXXXXXXXXXXXXXXXXXFCHPSFGYASDKKARRCARHRLENMEGVKGHRQKRRKEA 144
            DGLRPVCXXXXXXXXXXXXXXXXXXXXXX  HPSFGYASDKKARRCARHRLENMEGVKGHRQKRR+EA
Sbjct:  594 DGLRPVCXXXXXXXXXXXXXXXXXXXXXXXXHPSFGYASDKKARRCARHRLENMEGVKGHRQKRRREA 661
[Close]
BLAST of mRNA_H-paniculata_contig23075.6200.1 vs. uniprot
Match: D8LFX5_ECTSI (EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX5_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 4.060e-5
Identity = 19/38 (50.00%), Postives = 27/38 (71.05%), Query Frame = 0 
Query:    2 GDRRASYCAEHKLTGMINVASRRCQHPGCLRHPNFGFP 39
            G +RA +CA+H+L GM+NV + RC+  GC + P FG P
Sbjct:   20 GTKRAQFCAQHRLGGMVNVLAPRCETEGCKKRPTFGIP 57
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23075.6200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJI6_ECTSI5.330e-1595.59EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LFX5_ECTSI4.060e-550.00EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23075contigH-paniculata_contig23075:1981..3664 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23075.6200.1mRNA_H-paniculata_contig23075.6200.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23075 1981..3664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23075.6200.1 ID=prot_H-paniculata_contig23075.6200.1|Name=mRNA_H-paniculata_contig23075.6200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=144bp
QGDRRASYCAEHKLTGMINVASRRCQHPGCLRHPNFGFPGDRRASYCSGH
RETGMVDIVSRRCRDPSCGRRPLYNMDGLRPVCCSQHKAPGMIDVVSTRC
QEPGCFCHPSFGYASDKKARRCARHRLENMEGVKGHRQKRRKEA
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