prot_H-paniculata_contig2303.6174.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2303.6174.1
Unique Nameprot_H-paniculata_contig2303.6174.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length165
Homology
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Match: A0A6H5JAY4_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAY4_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.120e-32
Identity = 68/133 (51.13%), Postives = 97/133 (72.93%), Query Frame = 0
Query:    1 NHHSAQPHASKITSQVIAGVVNGRAVVFNRRRAREINHLRISPVGVVEH-KFRVVHDLSFPRNDPDGFSTLNADTDFARAPQVELGHVIKDILLRIMYLRQKHGPSARIVISKMDVIEAYRQIPIDPAGANLF 132
            NH SA  H  +IT +V++ V+ GRA+VF+ R  REI  +R+SP+GV++  KFR++HDL+F    P   S +N DTDF +AP+  LGHV+ DIL R++YLRQ HG S  I+I ++DV EA+RQIP+DP+ A++F
Sbjct:  679 NHPSALLHRDRITDKVVSDVILGRALVFDVRFIREILGVRVSPLGVIDKPKFRIIHDLTFTSGVPIRTS-VNHDTDFDQAPECLLGHVLSDILKRVLYLRQVHGVSLEILICRIDVKEAFRQIPVDPSRASVF 810          
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Match: A0A835YZC0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC0_9STRA)

HSP 1 Score: 107 bits (266), Expect = 7.840e-26
Identity = 70/162 (43.21%), Postives = 91/162 (56.17%), Query Frame = 0
Query:    8 HASKITSQVIAGVVNGRAVVFNRRRAREI--NHLRISPVGVVEH---KFRVVHDLSFPRNDPDGFSTLNADTDFARAPQVELGHVIKDILLRIMYLRQKHGPSARIVISKMDVIEAYRQIPIDPAGANLFSYAIEGVVVSDLRLQFGWRSSSGYWALAAAAL 164
            H      +V+  +  GR +V +   AR      L I+PV VV+    KFRVVHDLS   +      ++N  T F  AP V  GH+ + +L RI  LRQ   P  RI+ISKMDV  A+RQ+ +D  G  L  Y    +VV DLRLQFGWRSS G+W+LA  A+
Sbjct:   57 HVPVFDCKVLEDIALGRCIVMHAAIARMYFSTRLHINPVFVVDEGAAKFRVVHDLSALLHG----ESVNNTTVFEEAPVVGCGHIFEAMLYRIWSLRQA-WPRKRILISKMDVKSAFRQLALDVRGP-LLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAI 212          
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Match: A0A836CKZ7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKZ7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.420e-20
Identity = 59/120 (49.17%), Postives = 72/120 (60.00%), Query Frame = 0
Query:   39 LRISPVGVVEH---KFRVVHDLSFPRNDPDGFSTLNADTDFARAPQVELGHVIKDILLRIMYLRQKHGPSARIVISKMDVIEAYRQIPIDPAGANLFSYAIEGVVVSDLRLQFGWRSSSG 155
            L I+PV VV+     FRVVHDLS   +      ++N  T F  AP VE GH+ + +L RI  LRQ   P  RI+ISKMDV  A+RQ+ +D  G  L  Y    +VV DLRLQFGWRSS G
Sbjct:    7 LHINPVFVVDEGAANFRVVHDLSALLHG----ESVNNTTVFEEAPVVECGHIFEAMLYRIWSLRQA-WPRKRILISKMDVKSAFRQLALDVRGP-LLGYRYNDLVVVDLRLQFGWRSSPG 120          
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Match: A0A836CCV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV7_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 6.240e-11
Identity = 51/123 (41.46%), Postives = 66/123 (53.66%), Query Frame = 0
Query:    8 HASKITSQVIAGVVNGRAVVFNRRRAREI--NHLRISPVGVVEH---KFRVVHDLSFPRNDPDGFSTLNADTDFARAPQVELGHVIKDILLRIMYLRQKHGPSARIVISKMDVIEAYRQIPID 125
            H      +V+  +  GR +V +    R      L I+PV VV+    KFRVVHDLS   +   G S  N  T F  AP VE GH+ + +L RI  LRQ   P  RI+ISKMDV  A+RQ+ +D
Sbjct:  374 HVPVFDCKVLNYIALGRCIVMHAAVVRMYFSTRLHINPVFVVDEGAAKFRVVHDLSALLH---GESVDNNTTVFEDAPVVECGHIFEAMLYRIWSLRQA-WPRKRILISKMDVKSAFRQLALD 492          
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Match: A0A8B8C950_CRAVI (uncharacterized protein LOC111117438 isoform X1 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8C950_CRAVI)

HSP 1 Score: 59.3 bits (142), Expect = 2.880e-7
Identity = 53/157 (33.76%), Postives = 74/157 (47.13%), Query Frame = 0
Query:    1 NHHSAQPHASKITSQVIAGVVNGRAVVFNRRRAREINHLRISPVGVV----EHKFRVVHDLSFPRNDPDGFSTLNADTDFARAPQVELGHVIKDILLRIMYLRQKHGPSARIVISKMDVIEAYRQIPIDPAGANLFSYAIEGVVVSDLRLQFGWRSS 153
            NH SA+ H   I   +  G + GR  +     +        SP+GVV    E KFRV+HDLSFP+N     +++N+     R P  E   V  D +  I  L Q+ G  A  ++SK D+ +A+R IPI      L  ++ EG    D  L  G  SS
Sbjct:   12 NHRSAEQHPEIINDFISKGKIEGR--IAGPFLSPPFEPFITSPLGVVPKSEEGKFRVIHDLSFPKN-----NSVNS-----RIPP-ENSQVTYDSIDTITMLVQQFGEGA--LMSKTDIQDAFRIIPIHFNDHKLLGFSWEGSYYYDKCLPMGASSS 153          
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Match: UPI00148A620E (uncharacterized protein LOC117683174 isoform X1 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A620E)

HSP 1 Score: 57.8 bits (138), Expect = 1.020e-6
Identity = 53/170 (31.18%), Postives = 81/170 (47.65%), Query Frame = 0
Query:    1 NHHSAQPHASKITSQVIAGVVNGR-AVVFNRRRAREINHLRISPVGVVEH----KFRVVHDLSFPRNDPDGFSTLNADTDFARAPQVELGHVIKDILLRIMYLRQKHGPSARIVISKMDVIEAYRQIPIDPAGANLFSYAIEGVVVSDLRLQFGWRSSSGYWALAAAALN 165
            NH S   H   I   +  G+  GR A  F+ +         +SP+G+V      KFRV+HDLSFP+N      ++N++      P+ E   V  D + +++ L QK G     +++K D+ +A+R IPI PA   L  +  EG    D  L  G  SS   +   ++AL 
Sbjct:  102 NHKSTLDHPDIIEDYIQTGLNKGRIAGPFSNK---PFEQFVVSPLGLVPKGSTGKFRVIHDLSFPKN-----QSVNSNI-----PR-ENSAVQYDSIDQVVDLVQKFGREC--LMAKTDIEDAFRIIPIHPADYYLLGFTWEGQYYYDKCLPMGASSSCQIFESFSSALQ 255          
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Match: A0A835YMP6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP6_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.270e-6
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0
Query:  113 MDVIEAYRQIPIDPAGANLFSYAIEGVVVSDLRLQFGWRSSSGYWALAAAALN 165
            MDV  A+RQ+ +D  G  L  Y    +VV DLRLQFGWRSS G+W+LA  A+ 
Sbjct:  110 MDVKSAFRQLALDVRGP-LLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAIE 161          
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Match: A0A2R6Q7G9_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6Q7G9_9APHY)

HSP 1 Score: 57.0 bits (136), Expect = 1.870e-6
Identity = 47/138 (34.06%), Postives = 66/138 (47.83%), Query Frame = 0
Query:   34 REINHLRISPVGVVEH----KFRVVHDLSFPRNDPDGFS---TLNAD---TDFARAPQVELGHVIKDILLRIMYLRQKHGPSARIVISKMDVIEAYRQIPIDPAGANLFSYAIEGVVVSDLRLQFGWRSSSGYWALAA 161
            R I   R SP+G+V      KFR+V D+SFPRNDP   S   T+NAD   T++    Q        +++L++        PS  +  +  D+  AYR  P+ PA  N       G V  D  + FG RSS+G +   A
Sbjct:  109 RIIGCFRTSPLGLVPKSGTSKFRLVQDMSFPRNDPLMVSVNATINADDFPTEWGTFAQTS------ELILKL--------PSGSLAAT-FDIKAAYRITPVQPAQQNALCVFWRGKVYVDRAVAFGLRSSAGVFGALA 231          
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Match: A0A6I9NXK5_9TELE (Ribonuclease H n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9NXK5_9TELE)

HSP 1 Score: 54.3 bits (129), Expect = 1.660e-5
Identity = 40/119 (33.61%), Postives = 62/119 (52.10%), Query Frame = 0
Query:   39 LRISPVGVVEHKF----RVVHDLSFPRNDPDGFSTLNADTDFARAPQVELGHVIKDILLRIMYLRQKHGPSARIVISKMDVIEAYRQIPIDPAGANLFSYAIEGVVVSDLRLQFGWRSS 153
            LR SP+GV   K+    R++ DLS PR+ P  F ++N+      +    L H + D  ++++ L    G  A +  SK D+ +A++ IPI P+  N+F    E      +RL FG RSS
Sbjct:  427 LRTSPIGVATRKYSEKKRLIFDLSAPRSGP--FCSINS---LIPSEPFSLHHALVDNAIKLIKLA---GQGAWL--SKADITDAFKIIPIHPSQWNMFGIRWESKFYFAVRLTFGCRSS 535          
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Match: A0A2R6NZ49_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NZ49_9APHY)

HSP 1 Score: 52.4 bits (124), Expect = 7.590e-5
Identity = 44/139 (31.65%), Postives = 64/139 (46.04%), Query Frame = 0
Query:   36 INHLRISPVGVVEH----KFRVVHDLSFPRNDPDGFS---TLNAD---TDFARAPQVELGHVIKDILLRIMYLRQKHGPSARIVISKMDVIEAYRQIPIDPAGANLFSYAIEGVVVSDLRLQFGWRSSSGYWALAAAAL 164
            I   R SP+G+V      K+R+V D+SFPRN+P   S   T+N+D   T++    Q        ++LL +        P +  V +  D+  AYR  P+ P   N       G V  D  + FG RSS+G +   A  L
Sbjct:  231 IGCFRTSPLGLVPKPNSTKYRLVQDMSFPRNNPSTVSVNATINSDDFPTEWGTFTQTS------ELLLSL-------PPGS--VAATFDITAAYRITPVSPTQQNALCVFWRGKVYVDRAVAFGLRSSAGVFGALADML 354          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2303.6174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JAY4_9PHAE1.120e-3251.13C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YZC0_9STRA7.840e-2643.21Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CKZ7_9STRA1.420e-2049.17Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CCV7_9STRA6.240e-1141.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8B8C950_CRAVI2.880e-733.76uncharacterized protein LOC111117438 isoform X1 n=... [more]
UPI00148A620E1.020e-631.18uncharacterized protein LOC117683174 isoform X1 n=... [more]
A0A835YMP6_9STRA1.270e-652.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2R6Q7G9_9APHY1.870e-634.06Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]
A0A6I9NXK5_9TELE1.660e-533.61Ribonuclease H n=1 Tax=Notothenia coriiceps TaxID=... [more]
A0A2R6NZ49_9APHY7.590e-531.65Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33050FAMILY NOT NAMEDcoord: 1..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2303contigH-paniculata_contig2303:17308..17802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2303.6174.1mRNA_H-paniculata_contig2303.6174.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2303 17308..17802 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2303.6174.1 ID=prot_H-paniculata_contig2303.6174.1|Name=mRNA_H-paniculata_contig2303.6174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=165bp
NHHSAQPHASKITSQVIAGVVNGRAVVFNRRRAREINHLRISPVGVVEHK
FRVVHDLSFPRNDPDGFSTLNADTDFARAPQVELGHVIKDILLRIMYLRQ
KHGPSARIVISKMDVIEAYRQIPIDPAGANLFSYAIEGVVVSDLRLQFGW
RSSSGYWALAAAALN
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