prot_H-paniculata_contig2302.6169.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2302.6169.1
Unique Nameprot_H-paniculata_contig2302.6169.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length189
Homology
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Match: D7FMX7_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX7_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 5.760e-73
Identity = 131/214 (61.21%), Postives = 146/214 (68.22%), Query Frame = 0
Query:    2 RAKTLLSRVKRWKEQGLTPEDVRDRVSEMTDVVDHALAARVYHEYQLLLRSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQLLKALVLGNPSS--LADSTREGIETR------------------------LDRHPGLGVSVFCAGDEDQHIYGWRGTTVDHLHSFEDDFPGAVRCTLTQTHRLPVHILRSATGLM 189
            RAKT+LSR+  WKEQG+T E+ R    E  D  D A AA VY  YQ  LR RRQ D+GDLC+M T+LF  HPEVL RYRW+ RHVLVDEYQDTSPAQ +LLKALV G PS    A +T   I                           L+ H GLGVS+FCAGDEDQHIYGWRGTTVDHLH FE+DFPGAVRC LT+THRLPVH+LRSATGLM
Sbjct:  326 RAKTVLSRIGVWKEQGITVEEHRSTNMEADDYTD-AAAAAVYPSYQQHLRRRRQVDFGDLCLMVTELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECFGAAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRFEEDFPGAVRCALTETHRLPVHVLRSATGLM 538          
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Match: A0A6H5JUX3_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX3_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.330e-46
Identity = 89/155 (57.42%), Postives = 97/155 (62.58%), Query Frame = 0
Query:   29 EMTDVVDHALAARVYHEYQLLLRSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQLLKALVLGNPSSLA--------------------------DSTREGIETRLDRHPGLGVSVFCAGDEDQHIYGWRGTTVDHLH 157
            E  D  D A AA VY  YQ  LR RRQ D+GDLC+MAT+LF  HPEVL RYRW+ RHVLVDEYQDTSPAQ +LLKALV G PS                             D+   G    L+ H GLGVS+FCAGDEDQHIYGWRGTTVDHLH
Sbjct:    2 EADDYTD-AAAAAVYPSYQQHLRRRRQVDFGDLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRASSATPASISPDPAVAMSEGEDGECFDAAGTGKGEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLH 155          
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Match: A0A521L273_9HYPH (DNA helicase (Fragment) n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521L273_9HYPH)

HSP 1 Score: 121 bits (303), Expect = 4.260e-29
Identity = 71/188 (37.77%), Postives = 95/188 (50.53%), Query Frame = 0
Query:    3 AKTLLSRVKRWKEQGLTPEDVR-DRVSEMTDVVDHALAARVYHEYQLLLRSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQLLKALVLGNPSSLADSTREGIETRLDRHPGLGVSVFCAGDEDQHIYGWRGTTVDHLHSFEDDFPGAVRCTLTQTHRLPVHILRSATGLM 189
            A+ L   ++RWK++ LTP+ V  D   E         AA +Y +YQ  L      D+GDL M    L+  HP+VLA+Y  + RH+LVDEYQDT+ AQ   L+ L  G                          V C GD+DQ IYGWRG  V ++  FE DFPGA    L + +R   HIL +A+ L+
Sbjct:  164 ARILSGIIQRWKDRALTPDKVSADDAGEFAG----GKAAEIYRQYQTRLAEVNAVDFGDLVMHCVTLWQQHPDVLAQYHRRFRHILVDEYQDTNVAQYLWLRLLAQGTQD-----------------------VCCVGDDDQSIYGWRGAEVGNILRFEKDFPGATIVRLERNYRSTPHILAAASHLI 324          
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Match: A0A1F3A306_9PROT (DNA helicase n=8 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F3A306_9PROT)

HSP 1 Score: 121 bits (304), Expect = 1.370e-28
Identity = 71/188 (37.77%), Postives = 95/188 (50.53%), Query Frame = 0
Query:    3 AKTLLSRVKRWKEQGLTPEDVR-DRVSEMTDVVDHALAARVYHEYQLLLRSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQLLKALVLGNPSSLADSTREGIETRLDRHPGLGVSVFCAGDEDQHIYGWRGTTVDHLHSFEDDFPGAVRCTLTQTHRLPVHILRSATGLM 189
            A+ L   ++RWK++ LTP+ V  D   E         AA +Y +YQ  L      D+GDL M    L+  HP+VLA+Y  + RH+LVDEYQDT+ AQ   L+ L  G                          V C GD+DQ IYGWRG  V ++  FE DFPGA    L + +R   HIL +A+ L+
Sbjct:  164 ARVLSGIIQRWKDRALTPDKVSGDEAGEFAG----GKAAEIYRQYQERLAEVNAVDFGDLVMHCVTLWQKHPDVLAQYHRRFRHILVDEYQDTNVAQYLWLRLLAQGTED-----------------------VCCVGDDDQSIYGWRGAEVGNILRFEKDFPGATIVRLERNYRSTPHILAAASHLI 324          
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Match: D0YT79_9ACTO (DNA helicase n=18 Tax=Mobiluncus mulieris TaxID=2052 RepID=D0YT79_9ACTO)

HSP 1 Score: 121 bits (303), Expect = 1.950e-28
Identity = 70/168 (41.67%), Postives = 95/168 (56.55%), Query Frame = 0
Query:   25 DRVSEMTDVVDHALAARVYHEYQLLLRSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQLLKALV---LGNPSSLADSTREGIETRLDRHPGLGVSVFCAGDEDQHIYGWRGTTVDHLHSFEDDFPGAVRCTLTQTHRLPVHILRSATGLM 189
            D++S++T        A +Y EYQ LLR     D+ DL      L+  HPE+LA+YR K R+VLVDEYQDT+PAQ QL++ L    LG+P          ++  L  HPG G++V   GD DQ IY +RG T+ ++  FE DFPGA    L Q +R    IL  A  ++
Sbjct:  214 DKISQLT--------AEIYAEYQQLLRRANAFDFDDLIAEVVYLWRRHPEILAKYRDKFRYVLVDEYQDTNPAQYQLVRLLARDPLGDPR---------LDGALGAHPGAGLTVV--GDSDQSIYAFRGATIRNIEEFEQDFPGATTVYLEQNYRSTGTILSVANAII 362          
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Match: A0A5B8FWK1_9RHOB (DNA helicase n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A5B8FWK1_9RHOB)

HSP 1 Score: 120 bits (302), Expect = 2.610e-28
Identity = 68/187 (36.36%), Postives = 98/187 (52.41%), Query Frame = 0
Query:    3 AKTLLSRVKRWKEQGLTPEDVRDRVSEMTDVVDHALAARVYHEYQLLLRSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQLLKALVLGNPSSLADSTREGIETRLDRHPGLGVSVFCAGDEDQHIYGWRGTTVDHLHSFEDDFPGAVRCTLTQTHRLPVHILRSATGLM 189
            ++ L S + RWK +  TP+ V    S   D       A +Y  YQ  L++   AD+GDL +   Q+F+ HP+VLA+Y+   R++LVDEYQDT+ AQ   L+ L  G+ +                       + C GD+DQ IYGWRG  V ++  FE DFPGA    L Q +R   HIL +A+ ++
Sbjct:  164 SRLLASLIDRWKNRAWTPDKVPADESGQYD----GRGAELYAAYQARLKTLNAADFGDLLLHVVQIFLMHPDVLAKYQRWFRYILVDEYQDTNVAQYLWLRLLAQGHRN-----------------------ICCVGDDDQSIYGWRGAEVGNILKFEKDFPGAAVIRLEQNYRSTPHILAAASSVI 323          
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Match: A0A7S2MAK1_9STRA (DNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MAK1_9STRA)

HSP 1 Score: 110 bits (274), Expect = 3.580e-27
Identity = 62/163 (38.04%), Postives = 92/163 (56.44%), Query Frame = 0
Query:   13 WKEQGLTPEDVRDRVSEMTDVVDHA-LAARVYHEYQLLLRSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQLLKALVLGN-----PSSLADSTREGIETRLDRH--PGLGVSVFCAGDEDQHIYGWRGTT-VDHLHSFEDDFPGA 166
            WKE G+ P ++    S+  +  +   +AA ++ EYQ +LR+ ++ D+GDL + A QL  S   +L R R  L +V+VDE+QD SP Q +L++ +V G      P   A   + G       H  P + V +FCAGD+DQ +YGWRG   V ++ SF  D PGA
Sbjct:    1 WKETGIDPVEMYAGGSDGEEATEEERMAAAIFPEYQRVLRTSKKLDFGDLILSAVQLLRSEEAILMRMREDLGYVMVDEFQDMSPMQYELMRLIVTGQSYPGPPPDAAPGEKMGGGAHAHSHHRPKV-VRLFCAGDDDQSVYGWRGVNAVQNIRSFTQDMPGA 162          
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Match: A0A832Q8X3_9GAMM (DNA helicase (Fragment) n=1 Tax=Pseudomonadaceae bacterium TaxID=1914538 RepID=A0A832Q8X3_9GAMM)

HSP 1 Score: 114 bits (284), Expect = 1.930e-26
Identity = 66/186 (35.48%), Postives = 98/186 (52.69%), Query Frame = 0
Query:    4 KTLLSRVKRWKEQGLTPEDVRDRVSEMTDVVDHALAARVYHEYQLLLRSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQLLKALVLGNPSSLADSTREGIETRLDRHPGLGVSVFCAGDEDQHIYGWRGTTVDHLHSFEDDFPGAVRCTLTQTHRLPVHILRSATGLM 189
            K L++ + RWK   L+P+      SE  +V    L AR+Y  YQ  LR+    D+ DL ++ TQLF+ +PEVL ++R ++R++LVDEYQDT+  Q +L+K L+ G+   L                         GD+DQ IY WRG   ++LH  +DD+P      L Q +R    IL +A  L+
Sbjct:  134 KRLVNMISRWKNDMLSPDQALASASEQEEV----LGARLYEAYQRSLRAYNAVDFDDLILLPTQLFVQNPEVLEKWRRRIRYLLVDEYQDTNTMQYELVK-LLTGDRGCLT----------------------VVGDDDQSIYSWRGARPENLHQLQDDYPDLRVVKLEQNYRSTNTILTAANALI 292          
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Match: A0A7K0K1P0_9ACTO (DNA helicase n=1 Tax=Mobiluncus porci TaxID=2652278 RepID=A0A7K0K1P0_9ACTO)

HSP 1 Score: 115 bits (288), Expect = 2.010e-26
Identity = 65/155 (41.94%), Postives = 87/155 (56.13%), Query Frame = 0
Query:   38 LAARVYHEYQLLLRSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQLLKALVL---GNPSSLADSTREGIETRLDRHPGLGVSVFCAGDEDQHIYGWRGTTVDHLHSFEDDFPGAVRCTLTQTHRLPVHILRSATGLM 189
            L A +Y EYQ +LR     D+ DL      L+   PE+LA+YR K RHVLVDEYQDT+PAQ +L++ L L   G+P          ++  LD  PG  ++V   GD DQ IY +RG T+ ++  FE DFPGA    L Q +R    IL  A  ++
Sbjct:  221 LTAEIYAEYQQMLRRANAFDFDDLIAEVVYLWRRRPEILAKYREKFRHVLVDEYQDTNPAQYELVRLLALPRFGDPR---------LDEALDAFPGAELTVV--GDSDQSIYAFRGATIRNIEEFESDFPGATTVYLEQNYRSTGTILSLANAII 364          
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Match: A0A1G6NY32_9PROT (DNA helicase n=7 Tax=Acetobacteraceae TaxID=433 RepID=A0A1G6NY32_9PROT)

HSP 1 Score: 113 bits (283), Expect = 8.960e-26
Identity = 69/188 (36.70%), Postives = 101/188 (53.72%), Query Frame = 0
Query:    3 AKTLLSRVKRWKEQGLTPEDVRDRVSEMTDVVDHALAAR-VYHEYQLLLRSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQLLKALVLGNPSSLADSTREGIETRLDRHPGLGVSVFCAGDEDQHIYGWRGTTVDHLHSFEDDFPGAVRCTLTQTHRLPVHILRSATGLM 189
            A+ L+ +++RWK++GL+PE    RV+   D    A  AR +Y  YQ  LR     D+GDL +  T++F +HPEVLA +  +LR+VLVDEYQDT+  Q   L+ L  G+ +                       + C GD+DQ IY WRG  ++++  FE DFP A    L   +R    IL +A+ L+
Sbjct:  148 AQGLMGQIQRWKDRGLSPE----RVTPAEDTDYAAGKARGLYAAYQSRLRDLNCCDFGDLMLHMTEIFRTHPEVLADWHRRLRYVLVDEYQDTNLVQYYWLRLLAQGHRN-----------------------ICCVGDDDQSIYSWRGAEIENILRFEKDFPNAKVVRLESNYRSTKPILATASHLI 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2302.6169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMX7_ECTSI5.760e-7361.21DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JUX3_9PHAE1.330e-4657.42DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A521L273_9HYPH4.260e-2937.77DNA helicase (Fragment) n=1 Tax=Reyranella sp. Tax... [more]
A0A1F3A306_9PROT1.370e-2837.77DNA helicase n=8 Tax=Alphaproteobacteria TaxID=282... [more]
D0YT79_9ACTO1.950e-2841.67DNA helicase n=18 Tax=Mobiluncus mulieris TaxID=20... [more]
A0A5B8FWK1_9RHOB2.610e-2836.36DNA helicase n=2 Tax=Rhodobacteraceae TaxID=31989 ... [more]
A0A7S2MAK1_9STRA3.580e-2738.04DNA helicase (Fragment) n=1 Tax=Dictyocha speculum... [more]
A0A832Q8X3_9GAMM1.930e-2635.48DNA helicase (Fragment) n=1 Tax=Pseudomonadaceae b... [more]
A0A7K0K1P0_9ACTO2.010e-2641.94DNA helicase n=1 Tax=Mobiluncus porci TaxID=265227... [more]
A0A1G6NY32_9PROT8.960e-2636.70DNA helicase n=7 Tax=Acetobacteraceae TaxID=433 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034739UvrD/AddA helicase, N-terminalPFAMPF00580UvrD-helicasecoord: 6..163
e-value: 7.1E-27
score: 94.7
NoneNo IPR availableGENE3D3.40.50.300coord: 35..189
e-value: 3.6E-31
score: 109.7
NoneNo IPR availablePANTHERPTHR11070:SF7DNA HELICASE IIcoord: 3..186
IPR000212DNA helicase, UvrD/REP typePANTHERPTHR11070UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBERcoord: 3..186
IPR014016UvrD-like helicase, ATP-binding domainPROSITEPS51198UVRD_HELICASE_ATP_BINDcoord: 1..178
score: 22.516
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2302contigH-paniculata_contig2302:5103..12419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2302.6169.1mRNA_H-paniculata_contig2302.6169.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2302 5101..12419 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2302.6169.1 ID=prot_H-paniculata_contig2302.6169.1|Name=mRNA_H-paniculata_contig2302.6169.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
VRAKTLLSRVKRWKEQGLTPEDVRDRVSEMTDVVDHALAARVYHEYQLLL
RSRRQADYGDLCMMATQLFISHPEVLARYRWKLRHVLVDEYQDTSPAQVQ
LLKALVLGNPSSLADSTREGIETRLDRHPGLGVSVFCAGDEDQHIYGWRG
TTVDHLHSFEDDFPGAVRCTLTQTHRLPVHILRSATGLM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034739UvrD/AddA_N
IPR000212DNA_helicase_UvrD/REP
IPR014016UvrD-like_ATP-bd
IPR027417P-loop_NTPase