prot_H-paniculata_contig2300.6167.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2300.6167.1
Unique Nameprot_H-paniculata_contig2300.6167.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length579
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2300.6167.1 vs. uniprot
Match: D7G949_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G949_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 2.260e-30
Identity = 60/99 (60.61%), Postives = 73/99 (73.74%), Query Frame = 0 
Query:  479 AADGRALEEELRAPILNPTGEEIAAIEYLKWELHGKFMAFPGEDYHNLLAHLATEIYHYRYPVEHGVDVLQSVMRAGAPEAAQVCAATLRHWNAPGELS 577
            AA+ R  E       +  T E++AA+EYLKWELHGKFMAFPGE YHNLLA+LA+EIYH RYPVEHG+D+L  VMR   PEA Q CAATL+  N P +++
Sbjct:   34 AAESRPNEPTSWDGEVQETPEDLAAMEYLKWELHGKFMAFPGEHYHNLLANLASEIYHNRYPVEHGIDILHGVMRDAGPEALQKCAATLKRMNLPPKMT 132
[Close]
BLAST of mRNA_H-paniculata_contig2300.6167.1 vs. uniprot
Match: A0A6H5JHB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHB5_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 4.450e-27
Identity = 56/84 (66.67%), Postives = 68/84 (80.95%), Query Frame = 0 
Query:  494 LNPTGEEIAAIEYLKWELHGKFMAFPGEDYHNLLAHLATEIYHYRYPVEHGVDVLQSVMRAGAPEAAQVCAATLRHWNAPGELS 577
            +  T E++AA+EYLKWELHGKFMAFPGE YHNLLA+LA+EIYH RYPVEHG+D+L  VMR   PEA Q CAATL+  N P +++
Sbjct:  417 VQETPEDLAAMEYLKWELHGKFMAFPGEHYHNLLANLASEIYHNRYPVEHGIDILHGVMRDAGPEALQKCAATLKRMNLPSKMT 500
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2300.6167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G949_ECTSI2.260e-3060.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHB5_9PHAE4.450e-2766.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2300contigH-paniculata_contig2300:8917..18322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2300.6167.1mRNA_H-paniculata_contig2300.6167.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2300 7658..19047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2300.6167.1 ID=prot_H-paniculata_contig2300.6167.1|Name=mRNA_H-paniculata_contig2300.6167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=579bp
MSRSATGLPLQNPASGNCGLQPTRQGIARMMAFSSGVVATDHTNWAGALL
ARGECWTSALQGELCAQEVDYIELTYELFRDGMIQGVPIGMAFVDYMAAL
LGCPPTRFDGKCAADPRIAQLRSPPQPIRPLSNVERVMVMNKFTRVEAPA
LFLHDEFSRQRHDYNGRVGLGPKSAGAAEAATQSHAKRPRPLPERIFDST
RDHLVASRGHTPFPALYNAELAPTSTIEVGGGGAVLSAQDAVVAHASGQY
VTRGVLGLLTSAAATAAATATVTAATPPTNGTTCIAIGASGSGAQTTRHP
AASHPPQMCRSIVGTMTTAAAGDHGGNSNGGLPARPAVTSVCQPTVATAA
AAAAVAAIAGPELPPTPSTYLDDEREVPKYNEGLRLQALSQGLKPMQAPS
LPPPTPAPAQVRPLPNQPVDRASMGRAILGIGASQCAKATPSTQGDTKIS
HRKEDAAGRVVDRTDDGSSSPRVAGGRGAADGRALEEELRAPILNPTGEE
IAAIEYLKWELHGKFMAFPGEDYHNLLAHLATEIYHYRYPVEHGVDVLQS
VMRAGAPEAAQVCAATLRHWNAPGELSS*
back to top