prot_H-paniculata_contig2298.6157.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2298.6157.1
Unique Nameprot_H-paniculata_contig2298.6157.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length439
Homology
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: D8LJ71_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ71_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 1.310e-73
Identity = 156/335 (46.57%), Postives = 206/335 (61.49%), Query Frame = 0
Query:    1 MLPRRGYEPVEDAED------YVHSETVTNNSNLTRSEYSPIPASVPD----------EETGGAPPDAIAAKASSE-------MTVRILDVQGQTYSFSVLPTTTVREIKDMLSETAGVEIALQRIIFGGKLLADSDTLASRSVFDGAAIHLFKKPK-GHAYPVGLATAAAQQPGGLGDIPPLMLHIQEGGGRSQVGYLDTSLELEAPRRGIRFLASALLLVSIMEVSVLLESLASISAAMTTPEGHGD--------AFHPVLTSEYWMLVRARSLSSVLGVIVGVLGVRGSQSLDLRTIKLYCFGLVVCAIVAISIRIEVLYDVFSGKIPFGDY 303
            MLPRRGYEPV+D ++         + +        + E S + +SVP              G     A A +  S+       MTVR+LDV+GQ Y   V P T+VRE+K ML + AGVE+  QRII GGK+L+D+DTL  R + DGAAIHLF++PK   A   G+ TA+AQQPG L + PP++L +QE GG  +        E+EAPRR I FLAS L+L+S+++   LLE  ASIS  ++ P             + HP L  EYW LV+ R+LSSV+G++VG LGVRGSQSL+  TI+ Y  GLV+CAIVA++IRIEV YD+ +GKIPFGDY
Sbjct:    1 MLPRRGYEPVDDVDEDSAPDLQAAAASERXXXXHVQGELSALCSSVPXXXXXXXXXXXSSDGVNSRTAGAGEVRSDXXXXDGRMTVRVLDVRGQFYPLRVTPETSVRELKLMLVDAAGVEVPRQRIIHGGKMLSDADTLGGRKISDGAAIHLFQRPKVAAAAAAGVGTASAQQPGNLHEFPPVLLQVQERGGNGEGA--GAHWEVEAPRRKIMFLASILVLISVLQ---LLECXASISTVLSVPGAXXXXXXXXXXXSAHPSLPGEYWFLVKGRTLSSVMGIVVGTLGVRGSQSLNTHTIRWYFVGLVMCAIVAMAIRIEVFYDIVTGKIPFGDY 330          
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: A0A6H5JCL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL3_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 7.050e-52
Identity = 135/338 (39.94%), Postives = 181/338 (53.55%), Query Frame = 0
Query:  108 KLLADSDTLASRSVFDGAAIHLFKKPK-GHAYPVGLATAAAQQPGGLGDIPPLMLH-IQEGGGRSQVGYLDTSLELEAPRRGIRFLASALLLVSIMEVSVLLESLASISAAMTTPEG--------HGDAFHPVLTSEYWMLVRARSLSSVLGVIVGVLGVRGSQSLDLRTIKLYCFGLVVCAIVAISIRIEVLYDVFSGKIPFGDYESDGLTSSSTDVYEDSPSGGSRGDRVGPERGDENEGGMAEPGDGEVPPEAHQNNLTYNTFIAFLAM-----------------------------------------VCSGGVWFLCIRRARRMRADIEVNL 394
            ++L+D+DTL SR + DGAAIHLF++PK   A   G+ TA+AQQPG L + PP++L  ++ GG R   G      E+EAPRR I FLAS L+L+S+++   LLE LAS S  ++ P          +G + HP L  EYW LVR R+LSSV+G++VG LGV GSQSL+  TI+ Y  GLV+CAIVA++IRIEV YD  +GKIPFGDY   G  S  +    D   GG           DE  GG   PG      E  Q++L +    AF+++                                         V SG +W +CIRR   MR  I +++
Sbjct:   29 QMLSDADTLGSRKISDGAAIHLFQRPKVAAAAAAGVGTASAQQPGNLYEFPPVLLQPLERGGDREGAG---AHWEVEAPRRKIMFLASILVLISVLQ---LLECLASTSTVLSVPGAGGGSTGGDNGGSAHPSLPGEYWFLVRGRTLSSVMGIVVGTLGVCGSQSLNTHTIRWYFVGLVMCAIVAMAIRIEVFYDTVTGKIPFGDY---GTNSPDSSRENDPGEGGXXXXXXXXXXXDE--GG---PGAHHEAAEEAQSSLVFMALSAFVSVSPARARGRSVPGQFFFDVAVVPPRMKRKVVAPLRTGCEKRVVVSGTLWMICIRRVHDMRRVISIHV 352          
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: A0A7S2UVV6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVV6_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.830e-8
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = 0
Query:   47 GAPPDAIAAKASSEMTVRILDVQGQTYSFSVLPTTTVREIKDMLSETAGVEIALQRIIFGGKLLADSDTLASRSVFDGAAIHLFKK-----------PKGHAYPVGLATAAAQQ----PGGLGDIPPLMLHIQEGGGRSQVGYLDTSLELEAPRRGIRFLASALLLVSIMEVSVLLESLAS 212
            G   D  A +  + + ++ILD +G+T+      +  V   KD+L+ET GVE ALQR+I+ G++L DS TL   +V +   IHLF +           P G+    G ++  + +     G    IP   +++        +      LEL    R +RFLA+ L LVS M+V  +L  +A+
Sbjct:   21 GESKDVEAGREEAPLNLKILDTKGKTWPVVAPGSMLVGAFKDLLAETTGVEKALQRLIYRGRILEDSKTLKDYAVEENTVIHLFARVPPSQQTRYPFPPGYQPGEGGSSEGSNRVVVHQGASPIIPVAPMNMT-----LPMHNFGMDLELIQSSRRVRFLAALLFLVSSMQVVAILALMAT 196          
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: A0A6H5JH29_9PHAE (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH29_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 6.910e-7
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   61 MTVRILDVQGQTYSFSVLPTTTVREIKDMLSETAGVEIALQRIIFGGKL 109
            MTVR+LDV+GQ Y   V P T+VRE+K ML + AGVE+  QRII GGK+
Sbjct:   83 MTVRVLDVRGQFYPLRVTPETSVRELKLMLVDAAGVEVPRQRIIHGGKV 131          
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: A0A1Y1U9P2_9TREE (Ubiquitin-related domain-containing protein n=1 Tax=Kockovaella imperatae TaxID=4999 RepID=A0A1Y1U9P2_9TREE)

HSP 1 Score: 53.9 bits (128), Expect = 7.860e-6
Identity = 27/69 (39.13%), Postives = 41/69 (59.42%), Query Frame = 0
Query:   61 MTVRILDVQGQTYSFSVLPTTTVREIKDMLSETAGVEIALQRIIFGGKLLADSDTLASRSVFDGAAIHL 129
            M V++  + G+     V P  T+ ++K+ + E AG+    QR+IFGGK +AD  T+ S  +  GAAIHL
Sbjct:    1 MLVKVKTLTGKEVDIDVQPDWTIAKVKERVEEKAGIPPVQQRLIFGGKAMADDKTVESYKIQAGAAIHL 69          
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: UPI001C82515F (uncharacterized protein n=1 Tax=Scheffersomyces spartinae TaxID=45513 RepID=UPI001C82515F)

HSP 1 Score: 57.4 bits (137), Expect = 2.160e-5
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   73 YSFSVLPTTTVREIKDMLSETAGVEIALQRIIFGGKLLADSDTLASRSVFDGAAIHLFKK 132
            Y F + PT TV E+K+++SE A V    QR+I+ GK+L D++T+AS  V  G  IHL K+
Sbjct:   18 YDFEIDPTITVLELKELISEPASVTSDCQRLIYSGKVLKDTETIASYKVQSGHTIHLVKR 77          
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: A0A7S3YE44_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YE44_HETAK)

HSP 1 Score: 53.5 bits (127), Expect = 5.360e-5
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 0
Query:   42 DEETGGAP---------PDAIAAKASS--EMTVRILDVQGQTYSFSVLP--TTTVREIKDMLSETAGVEIA--LQRIIFGGKLLADSDTLASRSVF-DGAAIHLFKK 132
            DEE G  P         PD  AAK ++   + V++LD QG+TY+  V     TTV ++K  L+   G  +A  LQR+I+ G++L DS TL S  +  +   +HLF +
Sbjct:   31 DEEQGSRPSEANATESKPDGTAAKTTNVNSIKVKVLDTQGRTYTVPVPAGGATTVADLKSALAAEGGAGVATELQRLIYAGRILEDSQTLQSCGITGEQTVVHLFAR 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LJ71_ECTSI1.310e-7346.57Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
A0A6H5JCL3_9PHAE7.050e-5239.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UVV6_9STRA2.830e-830.39Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6H5JH29_9PHAE6.910e-761.22Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
A0A1Y1U9P2_9TREE7.860e-639.13Ubiquitin-related domain-containing protein n=1 Ta... [more]
UPI001C82515F2.160e-546.67uncharacterized protein n=1 Tax=Scheffersomyces sp... [more]
A0A7S3YE44_HETAK5.360e-536.45Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 61..132
e-value: 7.2E-13
score: 58.7
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 63..133
e-value: 2.7E-13
score: 49.4
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 61..136
score: 18.214
NoneNo IPR availableGENE3D3.10.20.90coord: 51..139
e-value: 2.3E-16
score: 61.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 288..357
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 216..234
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 380..438
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 235..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 268..287
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 257..267
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 358..379
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 358..380
NoneNo IPR availableTMHMMTMhelixcoord: 236..258
NoneNo IPR availableTMHMMTMhelixcoord: 271..290
IPR015496UbiquilinPANTHERPTHR10677UBIQUILINcoord: 61..137
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 55..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2298contigH-paniculata_contig2298:14807..19319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2298.6157.1mRNA_H-paniculata_contig2298.6157.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2298 14580..20329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2298.6157.1 ID=prot_H-paniculata_contig2298.6157.1|Name=mRNA_H-paniculata_contig2298.6157.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=439bp
MLPRRGYEPVEDAEDYVHSETVTNNSNLTRSEYSPIPASVPDEETGGAPP
DAIAAKASSEMTVRILDVQGQTYSFSVLPTTTVREIKDMLSETAGVEIAL
QRIIFGGKLLADSDTLASRSVFDGAAIHLFKKPKGHAYPVGLATAAAQQP
GGLGDIPPLMLHIQEGGGRSQVGYLDTSLELEAPRRGIRFLASALLLVSI
MEVSVLLESLASISAAMTTPEGHGDAFHPVLTSEYWMLVRARSLSSVLGV
IVGVLGVRGSQSLDLRTIKLYCFGLVVCAIVAISIRIEVLYDVFSGKIPF
GDYESDGLTSSSTDVYEDSPSGGSRGDRVGPERGDENEGGMAEPGDGEVP
PEAHQNNLTYNTFIAFLAMVCSGGVWFLCIRRARRMRADIEVNLDRRHLL
LLEEMRQQRERDAVAVPRLESGRGEEEASALRTANSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR015496Ubiquilin
IPR029071Ubiquitin-like_domsf