|
|
Homology
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: D8LJ71_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ71_ECTSI) HSP 1 Score: 247 bits (630), Expect = 5.680e-70 Identity = 156/335 (46.57%), Postives = 206/335 (61.49%), Query Frame = 3
Query: 228 MLPRRGYEPVEDAED------YVHSETVTNNSNLTRSEYSPIPASVPD----------EETGGAPPDAIAAKASSE-------MTVRILDVQGQTYSFSVLPTTTVREIKDMLSETAGVEIALQRIIFGGKLLADSDTLASRSVFDGAAIHLFKKPK-GHAYPVGLATAAAQQPGGLGDIPPLMLHIQEGGGRSQVGYLDTSLELEAPRRGIRFLASALLLVSIMEVSVLLESLASISAAMTTPEGHGD--------AFHPVLTSEYWMLVRARSLSSVLGVIVGVLGVRGSQSLDLRTIKLYCFGLVVCAIVAISIRIEVLYDVFSGKIPFGDY 1136
MLPRRGYEPV+D ++ + + + E S + +SVP G A A + S+ MTVR+LDV+GQ Y V P T+VRE+K ML + AGVE+ QRII GGK+L+D+DTL R + DGAAIHLF++PK A G+ TA+AQQPG L + PP++L +QE GG + E+EAPRR I FLAS L+L+S+++ LLE ASIS ++ P + HP L EYW LV+ R+LSSV+G++VG LGVRGSQSL+ TI+ Y GLV+CAIVA++IRIEV YD+ +GKIPFGDY
Sbjct: 1 MLPRRGYEPVDDVDEDSAPDLQAAAASERXXXXHVQGELSALCSSVPXXXXXXXXXXXSSDGVNSRTAGAGEVRSDXXXXDGRMTVRVLDVRGQFYPLRVTPETSVRELKLMLVDAAGVEVPRQRIIHGGKMLSDADTLGGRKISDGAAIHLFQRPKVAAAAAAGVGTASAQQPGNLHEFPPVLLQVQERGGNGEGA--GAHWEVEAPRRKIMFLASILVLISVLQ---LLECXASISTVLSVPGAXXXXXXXXXXXSAHPSLPGEYWFLVKGRTLSSVMGIVVGTLGVRGSQSLNTHTIRWYFVGLVMCAIVAMAIRIEVFYDIVTGKIPFGDY 330
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: A0A6H5JCL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL3_9PHAE) HSP 1 Score: 188 bits (478), Expect = 4.230e-49 Identity = 135/338 (39.94%), Postives = 181/338 (53.55%), Query Frame = 3
Query: 549 KLLADSDTLASRSVFDGAAIHLFKKPK-GHAYPVGLATAAAQQPGGLGDIPPLMLH-IQEGGGRSQVGYLDTSLELEAPRRGIRFLASALLLVSIMEVSVLLESLASISAAMTTPEG--------HGDAFHPVLTSEYWMLVRARSLSSVLGVIVGVLGVRGSQSLDLRTIKLYCFGLVVCAIVAISIRIEVLYDVFSGKIPFGDYESDGLTSSSTDVYEDSPSGGSRGDRVGPERGDENEGGMAEPGDGEVPPEAHQNNLTYNTFIAFLAM-----------------------------------------VCSGGVWFLCIRRARRMRADIEVNL 1409
++L+D+DTL SR + DGAAIHLF++PK A G+ TA+AQQPG L + PP++L ++ GG R G E+EAPRR I FLAS L+L+S+++ LLE LAS S ++ P +G + HP L EYW LVR R+LSSV+G++VG LGV GSQSL+ TI+ Y GLV+CAIVA++IRIEV YD +GKIPFGDY G S + D GG DE GG PG E Q++L + AF+++ V SG +W +CIRR MR I +++
Sbjct: 29 QMLSDADTLGSRKISDGAAIHLFQRPKVAAAAAAGVGTASAQQPGNLYEFPPVLLQPLERGGDREGAG---AHWEVEAPRRKIMFLASILVLISVLQ---LLECLASTSTVLSVPGAGGGSTGGDNGGSAHPSLPGEYWFLVRGRTLSSVMGIVVGTLGVCGSQSLNTHTIRWYFVGLVMCAIVAMAIRIEVFYDTVTGKIPFGDY---GTNSPDSSRENDPGEGGXXXXXXXXXXXDE--GG---PGAHHEAAEEAQSSLVFMALSAFVSVSPARARGRSVPGQFFFDVAVVPPRMKRKVVAPLRTGCEKRVVVSGTLWMICIRRVHDMRRVISIHV 352
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: A0A7S2UVV6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVV6_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 6.610e-8 Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = 3
Query: 366 GAPPDAIAAKASSEMTVRILDVQGQTYSFSVLPTTTVREIKDMLSETAGVEIALQRIIFGGKLLADSDTLASRSVFDGAAIHLFKK-----------PKGHAYPVGLATAAAQQ----PGGLGDIPPLMLHIQEGGGRSQVGYLDTSLELEAPRRGIRFLASALLLVSIMEVSVLLESLAS 863
G D A + + + ++ILD +G+T+ + V KD+L+ET GVE ALQR+I+ G++L DS TL +V + IHLF + P G+ G ++ + + G IP +++ + LEL R +RFLA+ L LVS M+V +L +A+
Sbjct: 21 GESKDVEAGREEAPLNLKILDTKGKTWPVVAPGSMLVGAFKDLLAETTGVEKALQRLIYRGRILEDSKTLKDYAVEENTVIHLFARVPPSQQTRYPFPPGYQPGEGGSSEGSNRVVVHQGASPIIPVAPMNMT-----LPMHNFGMDLELIQSSRRVRFLAALLFLVSSMQVVAILALMAT 196
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: A0A6H5JH29_9PHAE (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH29_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 1.490e-6 Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 3
Query: 408 MTVRILDVQGQTYSFSVLPTTTVREIKDMLSETAGVEIALQRIIFGGKL 554
MTVR+LDV+GQ Y V P T+VRE+K ML + AGVE+ QRII GGK+
Sbjct: 83 MTVRVLDVRGQFYPLRVTPETSVRELKLMLVDAAGVEVPRQRIIHGGKV 131
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: A0A1Y1U9P2_9TREE (Ubiquitin-related domain-containing protein n=1 Tax=Kockovaella imperatae TaxID=4999 RepID=A0A1Y1U9P2_9TREE) HSP 1 Score: 53.9 bits (128), Expect = 1.570e-5 Identity = 27/69 (39.13%), Postives = 41/69 (59.42%), Query Frame = 3
Query: 408 MTVRILDVQGQTYSFSVLPTTTVREIKDMLSETAGVEIALQRIIFGGKLLADSDTLASRSVFDGAAIHL 614
M V++ + G+ V P T+ ++K+ + E AG+ QR+IFGGK +AD T+ S + GAAIHL
Sbjct: 1 MLVKVKTLTGKEVDIDVQPDWTIAKVKERVEEKAGIPPVQQRLIFGGKAMADDKTVESYKIQAGAAIHL 69
BLAST of mRNA_H-paniculata_contig2298.6157.1 vs. uniprot
Match: UPI001C82515F (uncharacterized protein n=1 Tax=Scheffersomyces spartinae TaxID=45513 RepID=UPI001C82515F) HSP 1 Score: 57.4 bits (137), Expect = 5.720e-5 Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 3
Query: 444 YSFSVLPTTTVREIKDMLSETAGVEIALQRIIFGGKLLADSDTLASRSVFDGAAIHLFKK 623
Y F + PT TV E+K+++SE A V QR+I+ GK+L D++T+AS V G IHL K+
Sbjct: 18 YDFEIDPTITVLELKELISEPASVTSDCQRLIYSGKVLKDTETIASYKVQSGHTIHLVKR 77
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 255.4 |
| Seed ortholog evalue | 4.9e-65 |
| Seed eggNOG ortholog | 2880.D8LJ71 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | Ubiquitin homologues |
| EggNOG OGs | 2E9AU@1,2SFPK@2759 |
| Ec32 ortholog description | Ubiquitin-like |
| Ec32 ortholog | Ec-02_004990.1 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 5 |
| Model size | 2554 |
| Cds size | 1317 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2298.6157.1 >prot_H-paniculata_contig2298.6157.1 ID=prot_H-paniculata_contig2298.6157.1|Name=mRNA_H-paniculata_contig2298.6157.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=439bp
MLPRRGYEPVEDAEDYVHSETVTNNSNLTRSEYSPIPASVPDEETGGAPP
DAIAAKASSEMTVRILDVQGQTYSFSVLPTTTVREIKDMLSETAGVEIAL
QRIIFGGKLLADSDTLASRSVFDGAAIHLFKKPKGHAYPVGLATAAAQQP
GGLGDIPPLMLHIQEGGGRSQVGYLDTSLELEAPRRGIRFLASALLLVSI
MEVSVLLESLASISAAMTTPEGHGDAFHPVLTSEYWMLVRARSLSSVLGV
IVGVLGVRGSQSLDLRTIKLYCFGLVVCAIVAISIRIEVLYDVFSGKIPF
GDYESDGLTSSSTDVYEDSPSGGSRGDRVGPERGDENEGGMAEPGDGEVP
PEAHQNNLTYNTFIAFLAMVCSGGVWFLCIRRARRMRADIEVNLDRRHLL
LLEEMRQQRERDAVAVPRLESGRGEEEASALRTANSSS* back to topmRNA from alignment at H-paniculata_contig2298:14580..20329+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2298.6157.1 ID=mRNA_H-paniculata_contig2298.6157.1|Name=mRNA_H-paniculata_contig2298.6157.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5750bp|location=Sequence derived from alignment at H-paniculata_contig2298:14580..20329+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCTTCTTCCAGCGTTGTTGCCACTTATATATGCCTTTCGACAAGGAGGA
GAAGTTTTGTTTAATTCCACGACTCACGGGTGCGAAGATGAGAATGCAGG
TGAATATGACGAAGCCAAGTACTAAGCAGTTGAGCCCAGCTCTGCTCAGG
CCAAAAGGTTGAAGCACGTGGACGACATCAACGAAGGCTGGCCGCGAGGG
GGCTGAGGAAGGAGGGAGAAGAGAAAAATGCTGCCACGGAGAGGATATGA
GCCTGTAGAAGACGCAGAAGATTATGTTCATAGCGAAACAGTTACCAACA
ATAGCAACCTGACGAGGTCTGAATACTCGCCGATCCCAGCGTCTGTCCCT
GACGAAGAAACTGGGGGTGCACCTCCTGATGCAATAGCTGCTAAGGCTAG
TAGTGAGATGACTGTGAGAATCCTGGATGTGCAGGGGCAGACGTACTCGT
TCTCGGTTTTGCCAACGACGACGGTGCGCGAGATAAAGGACATGTTGTCG
GAAACGGCGGGAGTGGAAATTGCGCTGCAACGGATCATCTTCGGGGGCAA
GGTGATAGAGGATTACTGCAACTCGGTTGCCCTTTGAGCGGCGAGCCGTC
GGTTCGAATTGTTGTATGTGCTCCCACTCACCCCTGTACATTATTTGCTT
TAATTCGACTGGCCTGGAAAACACGTACGCCTGGGTGGTGGAGGTGTAGT
TATACCTGCTCCTGATAATAAAGCAAACTTATCTTATGGCGTTTCCAACT
TGGATAAATTCCACTTCTTCACACCCAGATCCGTTGTAGCGAACGACCAC
GCAACGGTAGAGGAGAGCTTATCTATCAATAGTTCAGTTGGCGACGGGTA
CTCGTGAAAGAGAGCGGCTGCGTGGCAAACGAACCCTCAAATCACACCCG
CAACTTCCCCGACAGAGTTTTGTTTGCGCAGTCAGAACAATAAAATAAGA
CAAGAATCGACATGTCGGCATCCAACGCTCTCGACAAGGCGAAACGATCT
CTAACAATTCGTGCGGTTATGCGCAGTACCCAAACATTTTGAACTGTTCA
GGCCATCTCCTATGGTGTCAAAAAACTTCCAGTCACAATCATAATATTCC
AACTTTTTCATTGTGAAATAAAACAATTGGGAAGAATTGACCGCTAATCT
GATGGGGTCGGGCCTGAGTCAGAAACGTAACATGTCATTTGTTGAATGTT
TCATCGCTTTTTGCTAGCGGGGCAATTAAATTGAGAGAATTTCGAACACA
CGAATTCTCGTCCAGCACACCCTCATCCTGTGAAAGCGGACCACCATGAA
TGCACCATCCACCGCAATATTTATCAAGGCAAAGACCACCATGAATGCAC
CATCCACCGCAATATTTATCAAGGCAAAGCCTTGCGTGGAATGGTTGTGG
AAGGAAATGAGGGCTCAGGGATTACATTCGGGTGTGTGCAAGACACAGTG
GATCATTCTACAGAATGTACCACAGTGGTACGCTTGTACGTCTGTTAAGA
AGAACGGTGGAACCCTGCCCCTGAACGAGAGGTACAAGAAGGCGGTGCAG
CTATACAAGGATTTCGCCGTTGACAGCTTCTTCCGCTGGGTAAAGGAAAC
CCCCGAGCTGCCTCTCCCTGGGTGGGCGACTCACAGTCTGTTCGGAAAGA
TAGCAAGCGCCGCTGCACCCATGCGTCGATTGCGTATGTCATCTTCGTCT
GGACTATCGATGGCCGCCACTTCAGCAGCGAGCGCCGCCGATATGAACGA
TTGCAATTCCTGCAGATCTTCCATAAGGCGGCTGGGCTCACACCTTGGAT
TGTGTACGTTCTTCATAGTGGCATCTGTGACCAGCGCGGGTGTTTTACTG
TGGGCTATGAAACATCATCCAGGAGAACACAACACGCCTTTGTATCTCGT
TGAAGTCCCATTTTTGTGATTTTGTGGGGGTCTCATCAGTCAGTAAAAAA
TTGCGAATTTTTTACTCGGGGAGCTATCGATCCTCCCCGATCATAAAATT
TGTGTCAAAGAAACTGTTTATTTGATCCTATGGAATGATGGATAAAAAAT
CTCCAGTAAAAAAATGGGGGTTTCATAATTTTGACTGGAGTTTTTGACAC
TATAAGACATGGCCTTTTACAAAACGGTAGGGGGCTATCTTTTGCCGTAC
AAAACTCTCTCACCCTGTGGTATTCGCGTCAGTGCTGGCAACTACCGTTC
TCAGGCAACACACGGGTAGACTGGACCAGCGGGGCAACCTGTAGGCCCCA
TAGCGCCGTGCTCAACGAGTGAGTCTAAAATCTTCCGTCTTTCGATTTGC
CGAACGAAATCGTTGAAGCACATAAATTCTTATACAAAAATCGGAAACGA
AGAATCATGCCCCCTCCTTTGACGACTGCCCTCAACAAGATATATACAGG
ATAGCTCTGCAATTACGTATTTTCGCGTTTTCGCACCAAAACCCAAATAA
TCAAGTTTTATACCGTAATATAGGAATCACTGTCGCCGTAACCCCGCCCC
TGCGCGCCCCTGCCCCCCGCCCCTCGCCACCGGCGCGCAGCTACTCGCCG
ACTCAGATACCCTAGCTAGTAGAAGCGTATTCGACGGCGCAGCGATACAC
CTCTTCAAAAAGCCGAAAGGTCATGCCTACCCAGTAGGTCTTGCAACCGC
AGCCGCACAGCAACCGGGAGGGCTCGGCGATATTCCCCCGCTTATGCTGC
ACATACAGGAGGGGGGAGGTCGCTCTCAGGTCGGGTACTTGGATACTAGC
TTGGAGTTGGAGGCGCCGCGAAGGGGTATTCGATTCCTGGCATCGGCTCT
ACTTTTAGTCAGCATCATGGAGGTTAGCGTGGCAAGTATTCTTGTTTATT
CCTTGGCGTTCTGTTGCTTTGGCGTCTTTTTTTATTTTGTTTTGTTTTGG
AAACATGATGCGTGTTGTGTAGTTGTGCATTGTGTGTTCGGCATTTCGCT
GATTGCGTGGAAGATCTTTGTTTCGCCTTCCCCCCCACTTTCGTGCCCAC
TAAGCACAGCTTTAGTTGTTTCGTTTCCGTTTTTTTCACACGCGGGTGTG
TCGTTCGATACGCCCTCCTCGACTCAACTTGCCGACACAGCTACTGGAAT
CCTTGGCGAGCATCTCGGCAGCGATGACCACACCAGAAGGACACGGGGAT
GCTTTTCACCCCGTCCTTACCTCGGAGTACTGGATGCTCGTTCGTGCTCG
AAGCTTATCTAGCGTCCTTGGCGTCATCGTGGGTGTCCTTGGTAACGACC
GATGCAAATGCGCGCTGCTTTCGTAACGAGATTCAAATGGGACCACCTGT
CACAATGTCCAGATGTTTTGTGCAATCCTCTCGAAAACTCGCGGTCTACG
TGAACAGAAAAGCCGATACTCGAAGGTACAACCTGTTCTTGTCGATCCCA
TCATGAGGTCCCTAAAACATGATGCAAGTATGTGTATGATTTTTTTACTG
AGACCAATCATGTGCGATTGTCCTGGCGCTGAGTGCCATATCATGCTACT
TCCGGGTGGATGGTCGTCTTGATCATCGTAACTCGTACTGAGGAGGGAAA
TATCGAAACTGACTGTATGATGAGACAGTGACTTAGTTGGTTCGAATTAT
CCCGCCTAATATGTTTTTTGCGTTTTCTTTTCTGGGGAATTTGTTTTCCA
CCGCCACCGATTGACGTGCCAGTGCGATTGACCATGCCAATGAATGCGAA
GCACTTACAATGCTGCGGCAGGAGTTCGCTTTTCAGTACCTTTTTTTTTC
GTTTCTTCCTGTTGACGGCTCACACACAGGCGTGCGGGGTTCTCAAAGCC
TGGATTTGCGGACGATCAAGCTGTATTGCTTCGGCCTTGTGGTGTGCGCG
ATCGTGGCAATATCTATCCGAATAGAAGTGTTGTACGACGTTTTTTCGGG
AAAGGTCCGTGATTCAAGAGTGAATTTTGAAATGGTGGGAGATCCGGGGT
AGTCGTTCGTGTCTTTGTGTTATAATCCGTACTTCGTGAGCTGGAGGACG
ACCATCGAACTTACGTGCTTCGAGACTCACGACACCTGCACACGAAACAA
AGTGGAACCGTGGCTGTGTCGATGTACCGGTGCTAGCGGAGTCTTTACTG
TGAGTCAGTATGGAGAAAACCGCCTCAAAATGCTCCATTACGCCTGGATT
TTTGACAGAGTTCCTATGCCTGGTTGATTATGTTACGCTACGTTCTTTTC
GAGCACATATAGCAGCCGTTAATATGAGCCCGCTAAGAACTGGGATCCAC
TCGCCCATCGTTCACCTCTTCCTAAAACATAAAAAATTGCGTCGGATTGC
TTTCTTATGGGCAGATTCCGTTCGGTGACTATGAGTCGGATGGATTGACC
AGCTCCTCCACGGATGTCTACGAGGACTCACCGAGTGGGGGTAGTCGAGG
CGATCGAGTGGGACCCGAGCGTGGGGATGAGAACGAGGGGGGTATGGCAG
AGCCCGGGGACGGTGAGGTGCCTCCAGAGGCCCACCAGAATAATCTTACC
TACAACACCTTCATCGCTTTTTTGGCGATGGTGTGTTCGGGGGGGGTCTG
GTTCTTGTGTATTCGTAGAGCCAGACGAATGCGGGCGGATATCGAAGTCA
ACCTGGACAGACGACACTTACTGTTGCTGGAAGAGATGCGACAGCAGCGG
GAAAGGGATGCGGTCGCTGTCCCGCGATTAGAATCAGGGAGGGGTGAGGA
AGAAGCCTCGGCGTTGCGAACAGCAAATTCTAGCTCTTAAAACGGGACTG
GGGGATTGGCGAACGCCGGTCAGCTTCTTGGAATCGCTTGGCGACGCGTT
AGTACATGATTGGCCAGCGTTACCCAGGAAAATGCTGTCTCCGCTTGTCA
CGGAGATTTCTCTCTATTTTTCATCTGTCAAGTGAATGAAAATCTGTCAA
GTAGATTCATTTCGAAACCTAAAACTGTCCTGACTCGGTTTGTTATAGTG
TCTGGTGTTGAGGCTGAGAAAATTACCCTGTTGATGTCGCCGACTACTTG
TGTTAGTAGTGGACGTTTCCAACAGATAGATGGCGTGCTTTATATATATT
TGCTTCTTTCTTCGGGACATGCCACGAAGTGGGGTACAGGGGGGCAGGGG
TATACAGTTGTGTTCGTATTGGCGCGTACTCGCGACTAGTCCCATCGGAG
CGAGGTGGACCTTGTTTTTTCTGCATATACAAGTGATGTACCGTACGTGT
GCACGGCGCATAACGCGTGACCGTCCACACCTGTATTACAGGACTCGGGG
TGTAATGTAGTGTGAATATTTATTTTAGGGCGACGTAGATGATAGAACGT
ATCCGCTGTTCATTAGAAGAGGGCAAAGGTGCCCAGAATTTTTAGACTGA
TCAACTTCTGAGACCGTCATCTATCTGAACGACCGGAATACCTTGGTTGA
AAAATAAGGTCAGTCATGGTGATGACGTTATTTTCTATTTCGGGTTGCGG
GGTAATGTTTGGGATCGATGACGACATGTTTGATGAGCTATAGTTGATGA
TCATATATCAAAAATAAATTGTCGGAGAAATGTCGGAAAAATTCCCAATG
GTTGAGATCACTCTAGGCATGTACAATCATGAGAGATGTTACACACGAGT
AGTGGCAAACGCTGTACGAACCGCCGAGCTGTGTACATGTACTGTACTGT
ACTGTACTGTGCGGCAAAGGGCATGTAAGTGCAGATTTGAGTTTATCGTA
CCCCTTTTAAAACTGTACATTGCAAGCCCTAAATACCAAAATATTGTTTC
back to topCoding sequence (CDS) from alignment at H-paniculata_contig2298:14580..20329+ >mRNA_H-paniculata_contig2298.6157.1 ID=mRNA_H-paniculata_contig2298.6157.1|Name=mRNA_H-paniculata_contig2298.6157.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2634bp|location=Sequence derived from alignment at H-paniculata_contig2298:14580..20329+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGCCACGGAGAGGATATGAGCCTGTAGAAGACGCAGAAGATTATGT
TCATAGCGAAACAGTTACCAACAATAGCAACCTGACGAGGTCTGAATACT
CGCCGATCCCAGCGTCTGTCCCTGACGAAGAAACTGGGGGTGCACCTCCT
GATGCAATAGCTGCTAAGGCTAGTAGTGAGATGACTGTGAGAATCCTGGA
TGTGCAGGGGCAGACGTACTCGTTCTCGGTTTTGCCAACGACGACGGTGC
GCGAGATAAAGGACATGTTGTCGGAAACGGCGGGAGTGGAAATTGCGCTG
CAACGGATCATCTTCGGGGGCAAGATGCTGCCACGGAGAGGATATGAGCC
TGTAGAAGACGCAGAAGATTATGTTCATAGCGAAACAGTTACCAACAATA
GCAACCTGACGAGGTCTGAATACTCGCCGATCCCAGCGTCTGTCCCTGAC
GAAGAAACTGGGGGTGCACCTCCTGATGCAATAGCTGCTAAGGCTAGTAG
TGAGATGACTGTGAGAATCCTGGATGTGCAGGGGCAGACGTACTCGTTCT
CGGTTTTGCCAACGACGACGGTGCGCGAGATAAAGGACATGTTGTCGGAA
ACGGCGGGAGTGGAAATTGCGCTGCAACGGATCATCTTCGGGGGCAAGCT
ACTCGCCGACTCAGATACCCTAGCTAGTAGAAGCGTATTCGACGGCGCAG
CGATACACCTCTTCAAAAAGCCGAAAGGTCATGCCTACCCAGTAGGTCTT
GCAACCGCAGCCGCACAGCAACCGGGAGGGCTCGGCGATATTCCCCCGCT
TATGCTGCACATACAGGAGGGGGGAGGTCGCTCTCAGGTCGGGTACTTGG
ATACTAGCTTGGAGTTGGAGGCGCCGCGAAGGGGTATTCGATTCCTGGCA
TCGGCTCTACTTTTAGTCAGCATCATGGAGGTTAGCGTGCTACTCGCCGA
CTCAGATACCCTAGCTAGTAGAAGCGTATTCGACGGCGCAGCGATACACC
TCTTCAAAAAGCCGAAAGGTCATGCCTACCCAGTAGGTCTTGCAACCGCA
GCCGCACAGCAACCGGGAGGGCTCGGCGATATTCCCCCGCTTATGCTGCA
CATACAGGAGGGGGGAGGTCGCTCTCAGGTCGGGTACTTGGATACTAGCT
TGGAGTTGGAGGCGCCGCGAAGGGGTATTCGATTCCTGGCATCGGCTCTA
CTTTTAGTCAGCATCATGGAGGTTAGCGTGCTACTGGAATCCTTGGCGAG
CATCTCGGCAGCGATGACCACACCAGAAGGACACGGGGATGCTTTTCACC
CCGTCCTTACCTCGGAGTACTGGATGCTCGTTCGTGCTCGAAGCTTATCT
AGCGTCCTTGGCGTCATCGTGGGTGTCCTTGCTACTGGAATCCTTGGCGA
GCATCTCGGCAGCGATGACCACACCAGAAGGACACGGGGATGCTTTTCAC
CCCGTCCTTACCTCGGAGTACTGGATGCTCGTTCGTGCTCGAAGCTTATC
TAGCGTCCTTGGCGTCATCGTGGGTGTCCTTGGCGTGCGGGGTTCTCAAA
GCCTGGATTTGCGGACGATCAAGCTGTATTGCTTCGGCCTTGTGGTGTGC
GCGATCGTGGCAATATCTATCCGAATAGAAGTGTTGTACGACGTTTTTTC
GGGAAAGGCGTGCGGGGTTCTCAAAGCCTGGATTTGCGGACGATCAAGCT
GTATTGCTTCGGCCTTGTGGTGTGCGCGATCGTGGCAATATCTATCCGAA
TAGAAGTGTTGTACGACGTTTTTTCGGGAAAGATTCCGTTCGGTGACTAT
GAGTCGGATGGATTGACCAGCTCCTCCACGGATGTCTACGAGGACTCACC
GAGTGGGGGTAGTCGAGGCGATCGAGTGGGACCCGAGCGTGGGGATGAGA
ACGAGGGGGGTATGGCAGAGCCCGGGGACGGTGAGGTGCCTCCAGAGGCC
CACCAGAATAATCTTACCTACAACACCTTCATCGCTTTTTTGGCGATGGT
GTGTTCGGGGGGGGTCTGGTTCTTGTGTATTCGTAGAGCCAGACGAATGC
GGGCGGATATCGAAGTCAACCTGGACAGACGACACTTACTGTTGCTGGAA
GAGATGCGACAGCAGCGGGAAAGGGATGCGGTCGCTGTCCCGCGATTAGA
ATCAGGGAGGGGTGAGGAAGAAGCCTCGGCGTTGCGAACAGCAAATTCTA
GCTCTTAAATTCCGTTCGGTGACTATGAGTCGGATGGATTGACCAGCTCC
TCCACGGATGTCTACGAGGACTCACCGAGTGGGGGTAGTCGAGGCGATCG
AGTGGGACCCGAGCGTGGGGATGAGAACGAGGGGGGTATGGCAGAGCCCG
GGGACGGTGAGGTGCCTCCAGAGGCCCACCAGAATAATCTTACCTACAAC
ACCTTCATCGCTTTTTTGGCGATGGTGTGTTCGGGGGGGGTCTGGTTCTT
GTGTATTCGTAGAGCCAGACGAATGCGGGCGGATATCGAAGTCAACCTGG
ACAGACGACACTTACTGTTGCTGGAAGAGATGCGACAGCAGCGGGAAAGG
GATGCGGTCGCTGTCCCGCGATTAGAATCAGGGAGGGGTGAGGAAGAAGC
CTCGGCGTTGCGAACAGCAAATTCTAGCTCTTAA back to top
|