prot_H-paniculata_contig22976.6155.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig22976.6155.1
Unique Name	prot_H-paniculata_contig22976.6155.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	138

Homology

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BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Match: D8LJI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI7_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 6.940e-55
Identity = 96/138 (69.57%), Postives = 111/138 (80.43%), Query Frame = 0

Query:    1 RLLPLTSPHFWRTAVLDWSTGGSTQLGLFSPVFIIGGLMGRIFGELVLWLNDNVDFVDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIAQRFTKGIYDALMDTNGTPYLLEVKMI 138
            RL+ L    FW T    +S      +GLFSP+F+IGGLMGRIFGE+  W++  +D V++ F+PWEFALIGSA+FSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIA RFTKG+YDALMDTN TP+L E  MI
Sbjct:   51 RLISLLLIKFWTTI---FSVVQPLPVGLFSPIFVIGGLMGRIFGEIANWVDHCLDSVNINFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGVYDALMDTNKTPHLEEDLMI 185

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BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Match: A0A6H5K923_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K923_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 1.790e-54
Identity = 97/135 (71.85%), Postives = 110/135 (81.48%), Query Frame = 0

Query:    1 RLLPLTSPHFWRTAVLDWSTGGSTQLGLFSPVFIIGGLMGRIFGELVLWLNDNVDFVDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIAQRFTKGIYDALMDTNGTPYLLEV 135
            RL+ L    FW T    +S      +GLFSP+F+IGGLMGRIFGE+  W++   D V++KF+PWEFALIGSA+FSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIA RFTKGIYDALMDTN TP+L EV
Sbjct:  197 RLISLLLLKFWATI---FSVVQPLPVGLFSPIFVIGGLMGRIFGEVANWVDHCFDSVNIKFQPWEFALIGSAAFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIANRFTKGIYDALMDTNKTPHLEEV 328

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BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Match: W7UA92_9STRA (Chloride channel protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UA92_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.710e-38
Identity = 68/112 (60.71%), Postives = 90/112 (80.36%), Query Frame = 0

Query:   26 LGLFSPVFIIGGLMGRIFGELV--LWLNDNVDFVDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIAQRFTKGIYDALMDTNGTPYLLEV 135
            +GLF+P F+ GG +GR+FGE+V   +  D +       +PWEFA+IG+A+FS+GVTRAVSTAVIVFELSG+NHLRLP+ VAL+++YF+A RFTK +YD L+DTNGTP L E+
Sbjct:  525 VGLFTPTFVTGGAVGRLFGEIVHFFYPTDRI----TSLEPWEFAVIGAAAFSSGVTRAVSTAVIVFELSGQNHLRLPISVALLLAYFVANRFTKNVYDELLDTNGTPSLPEL 632

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BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Match: A0A7S2DMH5_9STRA (Chloride channel protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DMH5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 5.610e-37
Identity = 68/111 (61.26%), Postives = 86/111 (77.48%), Query Frame = 0

Query:   26 LGLFSPVFIIGGLMGRIFGELVLWLNDNVDFVDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIAQRFTKGIYDALMDTNGTPYLLEVK 136
            +GLF+PVFI GG +GR+FGE +      +       +PWEFA++GSA+FSAGVTR VSTAVI+FEL GE HLRLPL VA++++YFIA RF K IYDAL+DTNGTP LL ++
Sbjct:   69 VGLFTPVFITGGAIGRVFGEAIHLYFPAI----TALEPWEFAVVGSAAFSAGVTRVVSTAVILFELVGEPHLRLPLSVAILVAYFIANRFCKNIYDALIDTNGTPTLLPLE 175

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BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Match: A0A835YU91_9STRA (Chloride channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU91_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.940e-36
Identity = 62/107 (57.94%), Postives = 87/107 (81.31%), Query Frame = 0

Query:   26 LGLFSPVFIIGGLMGRIFGELVLWLNDNVDFVDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIAQRFTKGIYDALMDTNGTPYL 132
            +GLF+PVF++G   GR+FGE+  + N ++  + + F+PWEFA+IG+A+ S  +TRAVSTA+IVFE+SGEN LRLPLG+A++I++ IA RFTKG YD+L+DTN  PYL
Sbjct:  408 VGLFAPVFLLGAAFGRLFGEVARYANLSMGLMHLTFQPWEFAVIGAAALSGSITRAVSTAIIVFEMSGENCLRLPLGLAVLIAHTIASRFTKGAYDSLVDTNSAPYL 514

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BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Match: A0A7S0SPL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SPL1_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.430e-33
Identity = 58/113 (51.33%), Postives = 83/113 (73.45%), Query Frame = 0

Query:   26 LGLFSPVFIIGGLMGRIFGELVLWLNDNVDFVDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIAQRFTKGIYDALMDTNGTPYLLEVKMI 138
            +GLF+PVF+ G ++GRI GE+    N   +   +   PWEFA++G+A+++ GVTRA+STAVIVFELSG  HLRLP+ +A++ SYF+  R +K IYD L DTNGTP+L ++  +
Sbjct:   81 VGLFTPVFLNGSVLGRILGEIA---NSIPNLTSI--PPWEFAVVGAAAYATGVTRAISTAVIVFELSGLRHLRLPISLAVLASYFVGNRLSKNIYDVLSDTNGTPFLPDLPKV 188

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BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Match: A0A7S3GUC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUC0_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.450e-30
Identity = 55/107 (51.40%), Postives = 78/107 (72.90%), Query Frame = 0

Query:   26 LGLFSPVFIIGGLMGRIFGELVLWLNDNVDFVDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIAQRFTKGIYDALMDTNGTPYL 132
            +GLF+P F+ GGL+GRI GE +L      D     + PWE+AL+G+A+FS GVTRA+STAVI+FEL+ + HL LP+ V ++ ++F+  RFTK +YD LM+ NG PY+
Sbjct:   51 VGLFTPTFVTGGLLGRILGE-ILKTKPGFD----TYAPWEYALLGAAAFSTGVTRAISTAVIIFELACQPHLGLPISVVVLTAHFVGNRFTKNVYDVLMEANGGPYM 152

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BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Match: A0A7S3NNS7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNS7_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.390e-29
Identity = 59/126 (46.83%), Postives = 84/126 (66.67%), Query Frame = 0

Query:   26 LGLFSPVFIIGGLMGRIFGELV----------LWLNDNVDF---------VDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIAQRFTKGIYDALMDTNGTPYL 132
            +G+F P F+ G  +GR  GE++           W++   D          +  +F PWE+A+IG+A+F+AGVTRA+STAVI  EL+GENHLR+PL ++ ++++FI  RFTK IYDAL+DTNGTP L
Sbjct:  433 VGVFKPTFVCGAAIGRAIGEVLHSLAANYADRKWIDSLTDVDNTAHSTMPIITQFMPWEYAVIGAAAFAAGVTRALSTAVIFLELAGENHLRIPLLLSTLVAHFIGNRFTKPIYDALIDTNGTPTL 558

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BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Match: W4H8X4_9STRA (Chloride channel protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8X4_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.150e-26
Identity = 50/109 (45.87%), Postives = 78/109 (71.56%), Query Frame = 0

Query:   27 GLFSPVFIIGGLMGRIFGELVLWLNDNVDFVDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIAQRFTKGIYDALMDTNGTPYLLEV 135
            G+F+P F+IGG+ GR+ GE ++       FV  KF+P+EFA+IG+A+FSAGVTRA+STAVI+ E+S   +L +P+ ++++ +YF   RF + +YD L+ T   P LL++
Sbjct:  470 GIFTPTFVIGGIFGRLVGEAIV----VTQFVPTKFEPYEFAIIGAAAFSAGVTRAISTAVIIMEISHNGYLTIPVSISILAAYFTGGRFVENVYDVLISTARLPRLLKL 574

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BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Match: A0A2D4C2U2_PYTIN (Glyco_transf_28 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2U2_PYTIN)

HSP 1 Score: 114 bits (284), Expect = 1.210e-26
Identity = 50/109 (45.87%), Postives = 79/109 (72.48%), Query Frame = 0

Query:   27 GLFSPVFIIGGLMGRIFGELVLWLNDNVDFVDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLPLGVALMISYFIAQRFTKGIYDALMDTNGTPYLLEV 135
            GLF+P F+IGG+ GR+ GE +       D +D +++P+EFA+IG+ +FS+GVT A+STAVI+ E+S  + L LP+ +A++ SYF A+RFT+ +YD L+ T+  P L ++
Sbjct: 1172 GLFTPTFVIGGIFGRLVGEAI----KAYDLLDTQYEPFEFAVIGAGAFSSGVTHAISTAVIIMEISHSDGLNLPVSIAILASYFTAKRFTENVYDLLISTSNLPRLTKL 1276

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig22976.6155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LJI7_ECTSI	6.940e-55	69.57	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K923_9PHAE	1.790e-54	71.85	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
W7UA92_9STRA	5.710e-38	60.71	Chloride channel protein n=2 Tax=Monodopsidaceae T...	[more]
A0A7S2DMH5_9STRA	5.610e-37	61.26	Chloride channel protein n=1 Tax=Dictyocha speculu...	[more]
A0A835YU91_9STRA	2.940e-36	57.94	Chloride channel n=1 Tax=Tribonema minus TaxID=303...	[more]
A0A7S0SPL1_9STRA	1.430e-33	51.33	Hypothetical protein (Fragment) n=1 Tax=Chromulina...	[more]
A0A7S3GUC0_9STRA	3.450e-30	51.40	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A7S3NNS7_9STRA	2.390e-29	46.83	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
W4H8X4_9STRA	1.150e-26	45.87	Chloride channel protein n=7 Tax=Aphanomyces astac...	[more]
A0A2D4C2U2_PYTIN	1.210e-26	45.87	Glyco_transf_28 domain-containing protein n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001807	Chloride channel, voltage gated	PRINTS	PR00762	CLCHANNEL	coord: 119..133 score: 37.87 coord: 24..44 score: 43.05 coord: 64..80 score: 40.12 coord: 81..100 score: 45.0
IPR001807	Chloride channel, voltage gated	PFAM	PF00654	Voltage_CLC	coord: 11..113 e-value: 1.3E-18 score: 67.4
IPR014743	Chloride channel, core	GENE3D	1.10.3080.10		coord: 2..133 e-value: 5.8E-31 score: 109.8
IPR014743	Chloride channel, core	SUPERFAMILY	81340	Clc chloride channel	coord: 10..132
None	No IPR available	PANTHER	PTHR45720:SF10	CHLORIDE CHANNEL PROTEIN 2	coord: 26..135
None	No IPR available	PANTHER	PTHR45720	FAMILY NOT NAMED	coord: 26..135
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 90..94
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 28..50
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 95..112
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..27
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 113..138
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 51..65
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 66..89

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig22976	contig	H-paniculata_contig22976:1606..3706 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig22976.6155.1	mRNA_H-paniculata_contig22976.6155.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig22976 1606..3706 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig22976.6155.1 ID=prot_H-paniculata_contig22976.6155.1|Name=mRNA_H-paniculata_contig22976.6155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
RLLPLTSPHFWRTAVLDWSTGGSTQLGLFSPVFIIGGLMGRIFGELVLWL
NDNVDFVDVKFKPWEFALIGSASFSAGVTRAVSTAVIVFELSGENHLRLP
LGVALMISYFIAQRFTKGIYDALMDTNGTPYLLEVKMI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001807	Cl-channel_volt-gated
IPR014743	Cl-channel_core