mRNA_H-paniculata_contig22954.6148.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Match: D7FVW7_ECTSI (ADH_zinc_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW7_ECTSI) HSP 1 Score: 181 bits (458), Expect = 2.180e-50 Identity = 93/113 (82.30%), Postives = 103/113 (91.15%), Query Frame = 1
Query: 7 VSQGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAVLAKTHGGIGGASVVAVDMLPGRLEVAKRLGATAAITPKDAAEWAPFDVSLEVTGNPRGLQVSLN 345
V +GI+PEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLL VA+LA+TH G+GG SVVAVDMLP RL VA+RLGATA +TP DAA+ APFDVSLEVTGNPRGLQ +L+
Sbjct: 795 VPEGIDPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLAVAILARTHAGVGGGSVVAVDMLPDRLRVAERLGATATVTPVDAAKSAPFDVSLEVTGNPRGLQSALD 907
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Match: A0A6H5LPZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPZ8_9PHAE) HSP 1 Score: 130 bits (326), Expect = 9.880e-33 Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 1
Query: 7 VSQGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAVLAKTHGGIGGASVVAVDMLPGRLEVAKR 237
V +GIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLL VA+LAKTH G+GG SVVAVDMLP RL VA+R
Sbjct: 429 VPEGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLAVAILAKTHAGVGGGSVVAVDMLPDRLRVAER 505
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Match: A0A835YW36_9STRA (ADH_zinc_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW36_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.880e-30 Identity = 64/115 (55.65%), Postives = 80/115 (69.57%), Query Frame = 1
Query: 7 VSQGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAVLAKTHGGIGGASVVAVDMLPGRLEVAKRLGATAAITPKDAAEWAPFDVSLEVTGNPRGLQVSLNRS 351
V +GI EDA +LPAVETALSLV D +GE VAVFGQG+IGLLV A+L H G GG V+AVD+L R + A RLGA+ AITP A+ PFD +EV+G+ R LQ +L+ +
Sbjct: 80 VPEGISAEDACFLPAVETALSLVQDARVVLGEKVAVFGQGLIGLLVTAILGMAHAGPGGGKVIAVDLLDDRRQAALRLGASEAITPDQVAQAGPFDTCIEVSGSSRALQSALDNT 194
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Match: B8BXG1_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXG1_THAPS) HSP 1 Score: 110 bits (276), Expect = 1.870e-26 Identity = 60/121 (49.59%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 7 VSQGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAVLA-KTHGGIGGA----SVVAVDMLPGRLEVAKRLGATAAITPKDAAEWAPFDVSLEVTGNPRGLQVSLNRSA 354
V GI+ DA+++P+VETALSLVHD H R+GE+ AV+GQG+IGLLV ++L+ ++ + + SV A D L RL VA LGA +A+ P+ A++ PFDVS+EV+GNPR LQ +++ +A
Sbjct: 182 VPDGIDARDAIFMPSVETALSLVHDAHVRIGENAAVYGQGLIGLLVTSILSMQSPSAVSSSNRFSSVTAFDTLGDRLCVASTLGADSALQPQSASDSGPFDVSIEVSGNPRALQSAIDHTA 302
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Match: A0A1Z5KR23_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR23_FISSO) HSP 1 Score: 110 bits (275), Expect = 1.090e-25 Identity = 57/119 (47.90%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 4 FVSQGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAVLA-----KTHGGIGGASVVAVDMLPGRLEVAKRLGATAAITPKDAAEWAPFDVSLEVTGNPRGLQVSLN 345
FV I+P DA+++P+VETA+SL+H+ HPR+G+SV VFGQG+IGLLV +L+ K G G +V D+LP RL ++ +GA+ A+ P A++ PFDV++EV+GNPR LQ +++
Sbjct: 677 FVPDDIDPYDAIFMPSVETAVSLIHEAHPRLGDSVGVFGQGLIGLLVTCLLSDQGLNKISGRFG--TVSTFDLLPDRLALSALMGASQALAPNRASDAGPFDVTIEVSGNPRALQSAID 793
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Match: A0A7S2Y827_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y827_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.130e-25 Identity = 54/113 (47.79%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 7 VSQGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAVLAKTHGGIGGASVVAVDMLPGRLEVAKRLGATAAITPKDAAEWAPFDVSLEVTGNPRGLQVSLN 345
V G++P DA++LP+VETALS+V D H R GE +AVFGQG+IGLLV A+L H I ++ VD +P RL + +G++ A+ P A+ APFDV++EV+GN + LQ +++
Sbjct: 278 VPDGVDPYDAIFLPSVETALSIVQDAHVRFGERIAVFGQGLIGLLVTAILGNMHSSI--PTLTTVDSIPSRLAASTAMGSSQALLPDTVAQAAPFDVAIEVSGNSKALQTAID 388
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Match: A0A7S2Y7W5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y7W5_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.010e-25 Identity = 54/113 (47.79%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 7 VSQGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAVLAKTHGGIGGASVVAVDMLPGRLEVAKRLGATAAITPKDAAEWAPFDVSLEVTGNPRGLQVSLN 345
V G++P DA++LP+VETALS+V D H R GE +AVFGQG+IGLLV A+L H I ++ VD +P RL + +G++ A+ P A+ APFDV++EV+GN + LQ +++
Sbjct: 629 VPDGVDPYDAIFLPSVETALSIVQDAHVRFGERIAVFGQGLIGLLVTAILGNMHSSI--PTLTTVDSIPSRLAASTAMGSSQALLPDTVAQAAPFDVAIEVSGNSKALQTAID 739
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Match: A0A1E7FW20_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW20_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.070e-25 Identity = 57/123 (46.34%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 7 VSQGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAVLAK-----THGGIGGA--SVVAVDMLPGRLEVAKRLGATAAITPKDAAEWAPFDVSLEVTGNPRGLQVSLNRSA 354
V GI +DA+++P++ETALS+VHD + RVGE+VAV+GQG+IGLLV A+L++ H G S+ A DM+P RL A ++GA+ A+ P ++ PFDVS+EV+GN R LQ +++ ++
Sbjct: 190 VPDGINAQDAIFMPSIETALSIVHDANVRVGENVAVYGQGLIGLLVTALLSRGKSTFDHDVTSGKFDSITAFDMIPDRLAAASKMGASQALVPGTESQGGPFDVSIEVSGNARALQSAIDNTS 312
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Match: A0A7S2K011_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K011_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.000e-24 Identity = 52/102 (50.98%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 28 EDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAVLAKTHGGIGGASVVAV-DMLPGRLEVAKRLGATAAITPKDAAEWAPFDVSLEVTGNPRGL 330
EDA++ P+VETALSLVHD + R+GE VA++GQG+IGLLV ++L+ T+ G G + V DML RL A +GA+ A+ P A + PFDVS+E++GN + L
Sbjct: 1 EDAMFFPSVETALSLVHDANVRIGEKVAIYGQGLIGLLVTSILSLTNIGSGDFGTITVFDMLKDRLACASMMGASEALLPTQAGQAGPFDVSIEISGNGKAL 102
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Match: L1IRP4_GUITC (ADH_zinc_N domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IRP4_GUITC) HSP 1 Score: 107 bits (266), Expect = 1.780e-24 Identity = 62/117 (52.99%), Postives = 80/117 (68.38%), Query Frame = 1
Query: 7 VSQGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAVLAKTHGGIGGASVVAVDMLPGRLEVAKRLGATAAITPKDAAEWA-PFDVSLEVTGNPRGLQVSLNRSA 354
V + I EDA Y PAVETALSLV D P VGE VAVFGQGMIGLLV ++L +T +G VVAV++ P R +A+R+G +TP + + D+S+EVTGNPRGLQ +L+ +A
Sbjct: 682 VPEHISDEDACYFPAVETALSLVQDARPMVGERVAVFGQGMIGLLVSSILVQT---VGPEHVVAVELDPARAALARRMGVKHVLTPAELQQRRLHIDLSIEVTGNPRGLQAALDHTA 795 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22954.6148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22954.6148.1 >prot_H-paniculata_contig22954.6148.1 ID=prot_H-paniculata_contig22954.6148.1|Name=mRNA_H-paniculata_contig22954.6148.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp FFVSQGIEPEDAVYLPAVETALSLVHDVHPRVGESVAVFGQGMIGLLVVAback to top mRNA from alignment at H-paniculata_contig22954:115..2930+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22954.6148.1 ID=mRNA_H-paniculata_contig22954.6148.1|Name=mRNA_H-paniculata_contig22954.6148.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2816bp|location=Sequence derived from alignment at H-paniculata_contig22954:115..2930+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22954:115..2930+ >mRNA_H-paniculata_contig22954.6148.1 ID=mRNA_H-paniculata_contig22954.6148.1|Name=mRNA_H-paniculata_contig22954.6148.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at H-paniculata_contig22954:115..2930+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |