prot_H-paniculata_contig22949.6142.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22949.6142.1 vs. uniprot
Match: D7G710_ECTSI (General transcription and DNA repair factor IIH subunit TFB5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G710_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 5.570e-15 Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 0
Query: 1 DVPTKQFILSLDARLPCVVSDLDDTHVFVKKASVKEIQ 38
DVPTKQFI+SLDARL CVVSDLD THVFVKK SVKEIQ
Sbjct: 16 DVPTKQFIMSLDARLACVVSDLDATHVFVKKDSVKEIQ 53
BLAST of mRNA_H-paniculata_contig22949.6142.1 vs. uniprot
Match: UPI000DD144A2 (TFIIH basal transcription factor complex TTD-A subunit n=1 Tax=Malassezia restricta TaxID=76775 RepID=UPI000DD144A2) HSP 1 Score: 48.5 bits (114), Expect = 1.690e-6 Identity = 18/38 (47.37%), Postives = 28/38 (73.68%), Query Frame = 0
Query: 1 DVPTKQFILSLDARLPCVVSDLDDTHVFVKKASVKEIQ 38
DV KQ IL++D R+PC++ DLDDTH+ V V++++
Sbjct: 12 DVAVKQMILAIDERMPCIIMDLDDTHMLVNSKMVEQLR 49
BLAST of mRNA_H-paniculata_contig22949.6142.1 vs. uniprot
Match: A0A1M8ABE0_MALS4 (General transcription and DNA repair factor IIH subunit TFB5 n=1 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=A0A1M8ABE0_MALS4) HSP 1 Score: 46.6 bits (109), Expect = 9.780e-6 Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 0
Query: 1 DVPTKQFILSLDARLPCVVSDLDDTHVFVKKASVKEIQ 38
DV KQ ILS+D +PC+V DLD+THV V V +++
Sbjct: 12 DVAVKQMILSIDEHMPCIVMDLDETHVLVNTTLVDQLR 49 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22949.6142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig22949.6142.1 ID=prot_H-paniculata_contig22949.6142.1|Name=mRNA_H-paniculata_contig22949.6142.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=39bpback to top |