mRNA_H-paniculata_contig22907.6125.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22907.6125.1
Unique NamemRNA_H-paniculata_contig22907.6125.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A6H5JKM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKM5_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 1.600e-92
Identity = 162/242 (66.94%), Postives = 191/242 (78.93%), Query Frame = 1
Query:    1 QVEGMNEDDVKAALNAMVSNK---PTSRACDDDDNFFGSYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITL 717
            +V G  E DVK+AL AMVSNK   P  +  +DDD  FGSY+TNEELVAAAGGG+ALYG+NFFPN +DVTLKPYAP+LKKP ++++AGASASFEASVL +TE SMAS FTKTT+NGG+SIAQ+S +SWGVSASVS FGG A+A  SAD +  E  T                   A+ VETIICPMKSFRIPVS+M M++EALD A++VDTLLKAGQ+LDTFGSHVSNGRHLLGGIFF+T+TL
Sbjct:   77 KVPGKTEADVKSALMAMVSNKKGVPADQG-EDDDLLFGSYDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSCTSWGVSASVSSFGGAASASVSADSSETEGGTGEAKGSNAFSANSKTTTTSASTVETIICPMKSFRIPVSTMTMTEEALDHAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTL 317          
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: D7FI44_ECTSI (Bulb-type lectin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI44_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 1.070e-91
Identity = 161/241 (66.80%), Postives = 191/241 (79.25%), Query Frame = 1
Query:    1 QVEGMNEDDVKAALNAMVSNK---PTSRACDDDDNFFGSYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTIT 714
            +V G +E +VK+AL AMVSNK   P  +  +DDD   GS++TNEELVAAAGGG+ALYG+NFFPN +DVTLKPYAP+LKKP ++++AGASASFEASVL +TE SMAS FTKTT+NGG+SIAQ+SS+SWGVSASVS FGG A+A  SAD +  EE T                   AT VETI CPMKSFRIPVS+M M++EALD AL+VDTLLKAGQ+LDTFGSHVSNGRHLLGGIFF+T+T
Sbjct:  189 KVPGKSEAEVKSALMAMVSNKKGVPADQE-EDDDPLCGSFDTNEELVAAAGGGMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGVSASVSSFGGAASASVSADSSGTEEGTGEAKGSNAFSANNKTTTTSATTVETITCPMKSFRIPVSTMTMTEEALDHALEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMT 428          
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: D7FI45_ECTSI (MACPF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI45_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 1.960e-70
Identity = 126/196 (64.29%), Postives = 153/196 (78.06%), Query Frame = 1
Query:  148 GLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSETEV 735
            G+ALYG+NFFPN +DVTLKPYAP+LKKP ++++AGASASFEASVL +TE SMAS FTKTT+NGG+SIAQ+SS+SWG S SVS FGG            + ++ N                  ATMVETI CPMKSFRIPVS+M M++EALD A++VDTLLKAGQ+LDTFGSHVSNGRHLLGGIFF+T+T+T+E+EV
Sbjct:  437 GMALYGVNFFPNENDVTLKPYAPILKKPTFVEMAGASASFEASVLHSTEQSMASNFTKTTENGGISIAQSSSTSWGASTSVSSFGGA-----------VGDDKNESKTSNAFSANNKKTTTSATMVETITCPMKSFRIPVSTMTMTEEALDHAMEVDTLLKAGQFLDTFGSHVSNGRHLLGGIFFRTMTMTTESEV 621          
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: D7FTW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW7_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 3.620e-43
Identity = 98/219 (44.75%), Postives = 133/219 (60.73%), Query Frame = 1
Query:   88 DDNF-FGSYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSETEVKQ 741
            +DNF  GSY +NEELVA A GG ALYG+NFFP  DD+  KPY P+L  P Y+++ GA + F A V QTT MS  S F   ++  G S+A   ++S G S S + +    T G+   +A+  E T                   AT++E I CPMKSFRIP++ M +S++A  +AL+VD++  A ++LD FGSHVSNGR  LGGIF+ T+T+TS    K 
Sbjct:  497 EDNFGTGSYASNEELVAKASGGAALYGMNFFPTTDDIVSKPYTPILAAPSYVEMTGAVSDFTARVWQTTSMSKVSAFHNISETSGDSMATKIATSEGSSRSNATWFTGKTKGSG--NATSGETTEASEEEKSLQRANSQTTSSATVIEYIRCPMKSFRIPMARMVLSEDAFKTALEVDSIRDANEFLDAFGSHVSNGRQELGGIFYSTLTMTSSEATKS 713          
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A6H5JEU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEU4_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 6.320e-18
Identity = 61/198 (30.81%), Postives = 81/198 (40.91%), Query Frame = 1
Query:   88 DDNF-FGSYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGR 678
            +DNF  GSY +NEELVA A GG ALYG+NFFP  DD+  KPY P+L  P Y+++                                                                                            +  I CPMKSFRIP++ M +S++A  +AL+VD++  A ++LD FGSHVSNGR
Sbjct:  372 EDNFGTGSYASNEELVAKASGGAALYGMNFFPTTDDIVSKPYTPILAAPSYVEMHDTQG---------------------------------------------------------------------------------------MRDIRCPMKSFRIPMARMVLSEDAFKTALEVDSIRDANEFLDAFGSHVSNGR 482          
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A820FWS9_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A820FWS9_9BILA)

HSP 1 Score: 84.0 bits (206), Expect = 8.810e-15
Identity = 62/209 (29.67%), Postives = 105/209 (50.24%), Query Frame = 1
Query:  106 SYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSETE 732
            +Y+++E+++    GG+AL GI+   +   ++ +   PLL +P+   L   S +        T +  ++ FT+T    G+++A   S+S  +  + +GF             S EE +N                  AT VE +  PMK FRI    M++S EA +  +KVDTL +A  +L  FGSH+S+G   +GG+F +T+T+ +E E
Sbjct:  340 AYKSDEDIIERISGGIALCGIDL-TDPKKLSERIDRPLLSRPISCLLKSPSLTGGKKSKTFTSLEASNQFTQTIKTSGITVATDISASVLIVHANAGF-----------SRSSEERSNSSDQQRTLSKI-------ATRVEYVSAPMKCFRISPEEMKLSTEAENELIKVDTLPRASVFLHRFGSHLSDGTQHIGGVFIRTVTVKAEEE 529          
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A819SIA4_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A819SIA4_9BILA)

HSP 1 Score: 78.6 bits (192), Expect = 6.010e-13
Identity = 58/209 (27.75%), Postives = 101/209 (48.33%), Query Frame = 1
Query:  106 SYETNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSETE 732
            +Y+T+E+++    GG+AL GI+   +   ++ +   PLL +P+   L       E      T +  ++ FT+T    G+++A   ++S+ +  +  GF             S E+  N                  A  ++    P+K FRI    M++S EA +  +KVDTLLKA  +L  FGSH+S+G   +GG+F + +T+ +E E
Sbjct:  352 AYKTDEDVIERISGGIALCGIDL-TDPKRLSQRIDRPLLSRPISCPLKSPRLPGEKKSTTFTSLDASNQFTQTIKMSGITVATELAASFSIVHASIGF-----------SISSEKSLNSSNQQKKLSKI-------AIRIDYDSVPIKCFRISPEEMKLSTEAENELIKVDTLLKARDFLHRFGSHLSDGTQHIGGVFIRMVTVKAEEE 541          
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A1V9Y600_9STRA (VLIG-type G domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y600_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 9.950e-13
Identity = 65/201 (32.34%), Postives = 95/201 (47.26%), Query Frame = 1
Query:  115 TNEELVAAAGGGLALYGINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITL 717
            ++E++VA A GG ALYG+N   +   +T +   P+L++P    L G         +  T +S AS F  +  + G S A     S+G   + +G+    + G  +      EET                   A  V     P+KSFR   +SMR+S+EA+ +A  V     A  +LD FGSHVS G + LGGIF+KT  L
Sbjct:   77 SDEQVVARASGGAALYGVNLGMSEVHLTQRAPRPILQQPETCSLNGPILGSTVMEMTFTSISAASNFRSSVKSCGNSFAIDIHGSFGFFGASAGY----SRGRQSAKGGKSEETTKTTS--------------AAHVRYAFEPVKSFRFAQTSMRLSEEAITAARDVTNEEAADYFLDDFGSHVSCGDYHLGGIFWKTTEL 259          
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A024UML5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UML5_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 7.760e-11
Identity = 82/235 (34.89%), Postives = 117/235 (49.79%), Query Frame = 1
Query:   34 AALNAMVSNKPTSRACDDDDNFFGSYETNEELVAAAGGGLALYGINF----FPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSE 726
            A+   +++N+ +S A        G   T E+L+A A GG ALYG+        +   +  +P  PLL +P      G +++   SV Q + +  A+ F +T    G S+  A      + AS +G GG                  XXXXXXXXXXXXXXXXX A  V     PM+SFR+ V  M++SDEA   A  +   + A  +L  FGSH   G H +GGIF KT+ +T++
Sbjct:   81 ASFEKLMANELSSSAT------HGDALTREQLIAQASGGAALYGVGLGIVTSADRTGILQRPENPLLAQPTSCAFMGPTSAVTTSVEQFSTVQAATDFRQTMKTCGRSMGLA------LKASYAGVGGX------------XXXXXXXXXXXXXXXXXXXXXXSAAQVTYAYVPMQSFRMTVQDMQLSDEAKAVAATITNEMAATYFLQDFGSHAVCGVHEVGGIFCKTVEITTK 291          
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Match: A0A3R6V6B4_9STRA (VLIG-type G domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6V6B4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 9.010e-11
Identity = 82/235 (34.89%), Postives = 117/235 (49.79%), Query Frame = 1
Query:   34 AALNAMVSNKPTSRACDDDDNFFGSYETNEELVAAAGGGLALYGINF----FPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMASTFTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNXXXXXXXXXXXXXXXXXXATMVETIICPMKSFRIPVSSMRMSDEALDSALKVDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSE 726
            A+   +++N+ +S A        G   T E+L+A A GG ALYG+        +   +  +P  PLL +P      G +++   SV Q + +  A+ F +T    G S+  A      + AS +G GG                  XXXXXXXXXXXXXXXXX A  V     PM+SFR+ V  M++SDEA   A  +   + A  +L  FGSH   G H +GGIF KT+ +T++
Sbjct:   81 ASFEKLMANELSSSAT------HGDALTREQLIAQASGGAALYGVGLGIVTSADRTGILQRPENPLLAQPTSCAFMGPTSAVTTSVEQFSTVQAATDFRQTMKTCGRSMGLA------LKASYAGVGGX------------XXXXXXXXXXXXXXXXXXXXXXSAAQVTYAYVPMQSFRMTVQDMQLSDEAKAVAATITNEMAATYFLQDFGSHAVCGVHEVGGIFCKTVEITTK 291          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22907.6125.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JKM5_9PHAE1.600e-9266.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI44_ECTSI1.070e-9166.80Bulb-type lectin domain-containing protein n=1 Tax... [more]
D7FI45_ECTSI1.960e-7064.29MACPF domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FTW7_ECTSI3.620e-4344.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEU4_9PHAE6.320e-1830.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A820FWS9_9BILA8.810e-1529.67Hypothetical protein n=3 Tax=Rotaria sp. Silwood2 ... [more]
A0A819SIA4_9BILA6.010e-1327.75Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 ... [more]
A0A1V9Y600_9STRA9.950e-1332.34VLIG-type G domain-containing protein n=1 Tax=Achl... [more]
A0A024UML5_9STRA7.760e-1134.89Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A3R6V6B4_9STRA9.010e-1134.89VLIG-type G domain-containing protein n=1 Tax=Apha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22907contigH-paniculata_contig22907:310..2868 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score245.4
Seed ortholog evalue2.9e-62
Seed eggNOG ortholog2880.D7FI45
Hectar predicted targeting categoryother localisation
EggNOG OGs2E1A0@1,2S8MV@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size756
Cds size744
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22907.6125.1prot_H-paniculata_contig22907.6125.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22907 310..2856 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929639.8264546-CDS-H-paniculata_contig22907:309..5371622929639.8264546-CDS-H-paniculata_contig22907:309..537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22907 310..537 -
1691480947.0076895-CDS-H-paniculata_contig22907:309..5371691480947.0076895-CDS-H-paniculata_contig22907:309..537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22907 310..537 -
1622929640.045-CDS-H-paniculata_contig22907:966..10471622929640.045-CDS-H-paniculata_contig22907:966..1047Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22907 967..1047 -
1691480947.026059-CDS-H-paniculata_contig22907:966..10471691480947.026059-CDS-H-paniculata_contig22907:966..1047Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22907 967..1047 -
1622929640.0572078-CDS-H-paniculata_contig22907:1600..18021622929640.0572078-CDS-H-paniculata_contig22907:1600..1802Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22907 1601..1802 -
1691480947.0347152-CDS-H-paniculata_contig22907:1600..18021691480947.0347152-CDS-H-paniculata_contig22907:1600..1802Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22907 1601..1802 -
1622929640.06917-CDS-H-paniculata_contig22907:2120..22611622929640.06917-CDS-H-paniculata_contig22907:2120..2261Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22907 2121..2261 -
1691480947.0428987-CDS-H-paniculata_contig22907:2120..22611691480947.0428987-CDS-H-paniculata_contig22907:2120..2261Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22907 2121..2261 -
1622929640.0818434-CDS-H-paniculata_contig22907:2764..28561622929640.0818434-CDS-H-paniculata_contig22907:2764..2856Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22907 2765..2856 -
1691480947.054493-CDS-H-paniculata_contig22907:2764..28561691480947.054493-CDS-H-paniculata_contig22907:2764..2856Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22907 2765..2856 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929640.0934532-UTR-H-paniculata_contig22907:2856..28681622929640.0934532-UTR-H-paniculata_contig22907:2856..2868Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22907 2857..2868 -
1691480947.0682433-UTR-H-paniculata_contig22907:2856..28681691480947.0682433-UTR-H-paniculata_contig22907:2856..2868Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22907 2857..2868 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22907.6125.1

>prot_H-paniculata_contig22907.6125.1 ID=prot_H-paniculata_contig22907.6125.1|Name=mRNA_H-paniculata_contig22907.6125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=248bp
MNEDDVKAALNAMVSNKPTSRACDDDDNFFGSYETNEELVAAAGGGLALY
GINFFPNIDDVTLKPYAPLLKKPVYIDLAGASASFEASVLQTTEMSMAST
FTKTTDNGGLSIAQASSSSWGVSASVSGFGGLATAGASADDASIEEETNE
TTTSNAFNANNNKTTTTATMVETIICPMKSFRIPVSSMRMSDEALDSALK
VDTLLKAGQYLDTFGSHVSNGRHLLGGIFFKTITLTSETEVKQFAIP*
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mRNA from alignment at H-paniculata_contig22907:310..2868-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22907.6125.1 ID=mRNA_H-paniculata_contig22907.6125.1|Name=mRNA_H-paniculata_contig22907.6125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2559bp|location=Sequence derived from alignment at H-paniculata_contig22907:310..2868- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTTGAAGGGATGAACGAGGACGACGTGAAGGCTGCCTTGAACGCGAT GGTGTCGAACAAACCGACCTCACGCGCTTGCGATGATGACGACAATTTTT TCGGGTGAGTGTTTGACTTCCAACCGGTGTGGTGTATACTCAGTGCAATT CACTATGAATTTGCCGAGTGTGCGTCTGTCTTATCCTAGTATGTCTCGTT ACCCCTGGTACCCCCCCCCCCCGTCCCTCCGCTTCCATGTCATTCTGTCG ACGGTTATATCGTCTTGTTGTCAAACATTATCTTGACGCGTGCTCTCCGC GATATCTGGTGATGGTCTTGGTAATTAATGGCACCGGAACAGTGCTAGTG ACTGGCCCTTGTCCAGCTTTGTAAGTTGCAGCGAAGGCCTGCGGTGTACT GGACGGTCTCATTTGATCATGCCGTTCTCTCGAATGTGATATTTGAAGCA GGCAAAGCACGCAGCAGCCGTAAGATGATTCTGATTCTTGGGTTGGGGTA TCTGCAGAGAAATTATTTACATGTCTACCTGTGTATCTCTGCATGATTTC TCGCCGCTGAAAGTTGCCTGGGTGCTCTGCGCGGTTTGACCACGACCTTA CTGACAGCTCGTATGAAACAAATGAGGAGCTGGTCGCTGCTGCTGGCGGA GGGTTGGCGCTCTATGGCATCAACTTCTTTCCGAACATAGATGATGTCAC TCTCAAGCCCTACGCACCTCTGTTGAAAAAACCGGTGTACATCGACTTGT GAGTATGGTCTGTTGATGATGCTGCAAAACGACTCGGGTCAGCTTGCCTT GGCTAGGTCTGTTGAGCTGATTGTTGCCGCGATGACACCCTTTGTTGCCG TTTCCGTGGGTTGTTCTCATGTTTATTCATGAGAAGGATTTGGTTGATGC CTCCTCCGCGAAAGAAAAATGAGGACCGCCGCTCCGTCCCACTGCTTCAG GTCTTGTGTTTGAAACAGCAGAAAAGCAACGGGGCAGAACATAAACCCAT GGTCATCTGACAATACCCGTGGAGAAGCTCTAGTGATGCGTGATTTTTGC CACCTTGATAATATAGGGCTGGAGCGTCTGCGAGCTTCGAGGCGTCCGTG CTACAAACTACGGAGATGTCAATGGCGTCAACCTTCACTAAGACAACTGA CAACGGCGGCCTTAGCATAGCGCAGGCTTCAAGCTCGTCGTGGGGCGTCA GTGCCAGTGTATCAGGCTTCGGAGGCCTGGCAACCGCAGGGGCTAGTGCG GACGATGCAAGCATAGAGGTGATGCAAAGAGCCACCTCGCCCATCTATGC CATAACTTGTCTTTTAATGGGCCGGATAAGTCGCGTTTAGTCCACCTGGT TGTTTGCCTTGCTGTTTTATGTCCCTACACCTGACGACATATTCTACTTT TCGTTAGCAGAGTTGGTGAAGCTGGATAATCTTTCGAAGTCAGTCGCGGT ATTGACAAAGCTTCCCCGTCCGGGCTTCTTGTGGAAACGGGGACTATGCG GCTAGCGCCAGCTGGCGGCCCCGGCACTGCGTTTCATCGGTCAACCAAGA CCTGGCAACCTTTGTTCGATATCCGTAGGCGGTTGAGCGATATATATGTA TCTTGTGCTCGAAACAAGCATTCCTCCCGAACAGATCCTATATGTGTTGG ATTTGAACGGTTACAAGGTCCTCAAGGCATTCGAGGCCACAACCATGCAA AACGTGGAGTACGTAATAAACTTTACGGACTGGCAACTTACTCTTGCAAA GACGGTTTGGTGGGTGCGATTCACCTCCCTCACTTTTGTGGTGTCCTGTG TATCGTATCGCACGAATGCAGGAGGAAACGAACGAAACCACAACCAGCAA TGCCTTCAATGCCAACAACAACAAGACGACCACGACAGCGACCATGGTGG AGGTACGTACAGGTGCAATGTGCTCTAGACTCAAGATAAGCTACCCGTTG CCAGTAGATGTGTCTGGAGCCGAAATGATTGGGCATAAAGCGGACAATTG CCTAGAGCGCGTGAGACAATGCCCAAGACATTCGTCGAGGTCGAAGGAGG GGCATTCAATTGCTGAGGCCAGATACTACAAACTAACCCCGAATGAGGTC GTGGCGTAGTCCCGAGCCTACGCCTATTTTACTATATTGATCCTCTACAT GTTTTGTCTCCAGAAAGCGTTCCTACACTACTTTGCGACAAGACCCTCAC ATCTATCACCCGAGCAACCCCCGTTACCAGGTAATATAATTGTCATGAAG TTCCTCGCTTGTCCACAGAGTACGTGGCCTTCCTAACTCGTCCCTCCTAT CCGTTCGCTGCTTTTCATCTCGCAACAATAGACTATTATATGCCCAATGA AATCCTTCCGCATCCCGGTGTCGTCCATGAGGATGTCGGATGAGGCCTTG GACAGTGCGCTGAAGGTAGATACTCTGCTCAAAGCTGGACAATACCTGGA CACTTTCGGATCTCACGTGTCGAATGGCCGCCACCTTTTGGGTGGAATCT TCTTCAAGACCATCACTCTGACGTCCGAAACAGAGGTGAAACAGTTTGCT ATCCCATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig22907:310..2868-

>mRNA_H-paniculata_contig22907.6125.1 ID=mRNA_H-paniculata_contig22907.6125.1|Name=mRNA_H-paniculata_contig22907.6125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1488bp|location=Sequence derived from alignment at H-paniculata_contig22907:310..2868- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACGAGGACGACGTGAAGGCTGCCTTGAACGCGATGGTGTCGAACAA
ACCGACCTCACGCGCTTGCGATGATGACGACAATTTTTTCGGATGAACGA
GGACGACGTGAAGGCTGCCTTGAACGCGATGGTGTCGAACAAACCGACCT
CACGCGCTTGCGATGATGACGACAATTTTTTCGGCTCGTATGAAACAAAT
GAGGAGCTGGTCGCTGCTGCTGGCGGAGGGTTGGCGCTCTATGGCATCAA
CTTCTTTCCGAACATAGATGATGTCACTCTCAAGCCCTACGCACCTCTGT
TGAAAAAACCGGTGTACATCGACTTCTCGTATGAAACAAATGAGGAGCTG
GTCGCTGCTGCTGGCGGAGGGTTGGCGCTCTATGGCATCAACTTCTTTCC
GAACATAGATGATGTCACTCTCAAGCCCTACGCACCTCTGTTGAAAAAAC
CGGTGTACATCGACTTGGCTGGAGCGTCTGCGAGCTTCGAGGCGTCCGTG
CTACAAACTACGGAGATGTCAATGGCGTCAACCTTCACTAAGACAACTGA
CAACGGCGGCCTTAGCATAGCGCAGGCTTCAAGCTCGTCGTGGGGCGTCA
GTGCCAGTGTATCAGGCTTCGGAGGCCTGGCAACCGCAGGGGCTAGTGCG
GACGATGCAAGCATAGAGGGCTGGAGCGTCTGCGAGCTTCGAGGCGTCCG
TGCTACAAACTACGGAGATGTCAATGGCGTCAACCTTCACTAAGACAACT
GACAACGGCGGCCTTAGCATAGCGCAGGCTTCAAGCTCGTCGTGGGGCGT
CAGTGCCAGTGTATCAGGCTTCGGAGGCCTGGCAACCGCAGGGGCTAGTG
CGGACGATGCAAGCATAGAGGAGGAAACGAACGAAACCACAACCAGCAAT
GCCTTCAATGCCAACAACAACAAGACGACCACGACAGCGACCATGGTGGA
GGAGGAAACGAACGAAACCACAACCAGCAATGCCTTCAATGCCAACAACA
ACAAGACGACCACGACAGCGACCATGGTGGAGACTATTATATGCCCAATG
AAATCCTTCCGCATCCCGGTGTCGTCCATGAGGATGTCGGATGAGGCCTT
GGACAGTGCGCTGAAGGTAGATACTCTGCTCAAAGCTGGACAATACCTGG
ACACTTTCGGATCTCACGTGTCGAATGGCCGCCACCTTTTGGGTGGAATC
TTCTTCAAGACCATCACTCTGACGTCCGAAACAGAGGTGAAACAGTTTGC
TATCCCATGAACTATTATATGCCCAATGAAATCCTTCCGCATCCCGGTGT
CGTCCATGAGGATGTCGGATGAGGCCTTGGACAGTGCGCTGAAGGTAGAT
ACTCTGCTCAAAGCTGGACAATACCTGGACACTTTCGGATCTCACGTGTC
GAATGGCCGCCACCTTTTGGGTGGAATCTTCTTCAAGACCATCACTCTGA
CGTCCGAAACAGAGGTGAAACAGTTTGCTATCCCATGA
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