mRNA_H-paniculata_contig22890.6114.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Match: A0A6H5KCA7_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA7_9PHAE) HSP 1 Score: 328 bits (842), Expect = 4.520e-107 Identity = 167/194 (86.08%), Postives = 183/194 (94.33%), Query Frame = 1
Query: 1 QELVTMIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVPFYYCSGSDFVEMFVGRGAARVRKLFEKAAKTAPCIVFLDELDALGKERSASAGGRQSNDEAEQTLNQLLASMDGLDTNNNGVMVIAATNRFDVLDSALTRPGRFDRVVRVEVPNTAGREAILKVHTRRMNLADSALLGSVAELTPG 582
QELV+MIKNP PF+AAGARLPSGLLMVGPPGTGKTLMARVMA+EAGVPFYYCSGSDFVEM+VGRGAARVRKLF KA KTAPCI+FLDELDALGKERS + GGRQ+NDEAEQTLNQLLA MDGLDTNNNGVMVIAATNR++VLD+ALTRPGRFDR+VRV+VP+ AGREAILKVHTR+M L D A+L +VAELTPG
Sbjct: 375 QELVSMIKNPAPFIAAGARLPSGLLMVGPPGTGKTLMARVMAAEAGVPFYYCSGSDFVEMYVGRGAARVRKLFVKAGKTAPCIIFLDELDALGKERSGT-GGRQTNDEAEQTLNQLLACMDGLDTNNNGVMVIAATNRYEVLDNALTRPGRFDRIVRVDVPDAAGREAILKVHTRKMKLEDVAVLRAVAELTPG 567
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Match: D7G2Q1_ECTSI (Cell division protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Q1_ECTSI) HSP 1 Score: 315 bits (808), Expect = 1.490e-103 Identity = 167/215 (77.67%), Postives = 182/215 (84.65%), Query Frame = 1
Query: 1 QELVTMIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVP---------------------FYYCSGSDFVEMFVGRGAARVRKLFEKAAKTAPCIVFLDELDALGKERSASAGGRQSNDEAEQTLNQLLASMDGLDTNNNGVMVIAATNRFDVLDSALTRPGRFDRVVRVEVPNTAGREAILKVHTRRMNLADSALLGSVAELTPG 582
QELV+MIKNP PF+AAGARLPSGLLMVGPPGTGKTLMARVMA+EAGVP FYYCSGSDFVEM+VGRGAARVRKLF KA KTAPCI+FLDELDALGKERS + GGRQ+NDEAEQTLNQLLA MDGLDTNNNGVMVIAATNR+DVLD+ALTRPGRFDR+VRV+VP+ AGREAILKVHTR+M L D +L +VAELTPG
Sbjct: 222 QELVSMIKNPAPFIAAGARLPSGLLMVGPPGTGKTLMARVMAAEAGVPLPPPRRFRGVGGYLLIGRLPKFYYCSGSDFVEMYVGRGAARVRKLFVKAGKTAPCIIFLDELDALGKERSGT-GGRQTNDEAEQTLNQLLACMDGLDTNNNGVMVIAATNRYDVLDNALTRPGRFDRIVRVDVPDAAGREAILKVHTRKMKLEDVDVLRAVAELTPG 435
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Match: A0A835Z243_9STRA (Cell division protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z243_9STRA) HSP 1 Score: 295 bits (755), Expect = 5.340e-96 Identity = 149/194 (76.80%), Postives = 171/194 (88.14%), Query Frame = 1
Query: 1 QELVTMIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVPFYYCSGSDFVEMFVGRGAARVRKLFEKAAKTAPCIVFLDELDALGKERSASAGGRQSNDEAEQTLNQLLASMDGLDTNNNGVMVIAATNRFDVLDSALTRPGRFDRVVRVEVPNTAGREAILKVHTRRMNLADSALLGSVAELTPG 582
+ELV ++++P P++AAGARLPSG+++VGPPGTGKTL+ARVMA+EAGVP+YYCSGSDFVEMFVGRGAARVRKLF +AAKTAPCIVF DELDALGK+RS A R SNDEAEQTLNQLLA MDGLDTNNNGV+V+AATNRFD+LD ALTRPGRFDR+VRV VP AGR+A VHTR M L D ALL +VA +TPG
Sbjct: 209 RELVAILRDPAPYVAAGARLPSGVMLVGPPGTGKTLLARVMAAEAGVPYYYCSGSDFVEMFVGRGAARVRKLFARAAKTAPCIVFFDELDALGKQRSMGAN-RGSNDEAEQTLNQLLACMDGLDTNNNGVIVVAATNRFDMLDDALTRPGRFDRIVRVGVPEEAGRQASCTVHTRNMQLEDPALLVTVAAITPG 401
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Match: A0A4D9DB51_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB51_9STRA) HSP 1 Score: 265 bits (676), Expect = 1.800e-84 Identity = 133/194 (68.56%), Postives = 161/194 (82.99%), Query Frame = 1
Query: 1 QELVTMIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVPFYYCSGSDFVEMFVGRGAARVRKLFEKAAKTAPCIVFLDELDALGKERSASAGGRQSNDEAEQTLNQLLASMDGLDTNNNGVMVIAATNRFDVLDSALTRPGRFDRVVRVEVPNTAGREAILKVHTRRMNLADSALLGSVAELTPG 582
+ELV M+K+P + GARLP G+L+ GPPGTGKTL+AR +ASEAGVPF Y +GS+FVEMFVGRGAAR+R LF+KA K APCI+FLDELD LGK+RS GG SNDE EQTLNQLLA MDGLD+N +GV+VIAATNR+++LD ALTRPGR DR+VRVE+P+ +GREAIL+VHTR+ L A LG +A+LTPG
Sbjct: 177 RELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSLRLGG--SNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPG 368
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Match: A0A6V1T8M4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T8M4_HETAK) HSP 1 Score: 261 bits (668), Expect = 4.020e-84 Identity = 131/194 (67.53%), Postives = 162/194 (83.51%), Query Frame = 1
Query: 1 QELVTMIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVPFYYCSGSDFVEMFVGRGAARVRKLFEKAAKTAPCIVFLDELDALGKERSASAGGRQSNDEAEQTLNQLLASMDGLDTNNNGVMVIAATNRFDVLDSALTRPGRFDRVVRVEVPNTAGREAILKVHTRRMNLADSALLGSVAELTPG 582
QE+VT+++NP ++ AG RLPSG++MVGPPGTGKTL+A VMA+EAGVPF+ CSGS+FVEMFVGRGAARVR +FE+A K APCI+F DE+D LG+ RS+ AG QS EA+QTLNQLLA MDGLDT+NNGV+V+AATNR++VLD ALTRPGRFDRVVRV +P+ GR+ IL VH +++ L + L VAELTPG
Sbjct: 109 QEIVTILRNPAVYIKAGVRLPSGVVMVGPPGTGKTLLASVMAAEAGVPFFSCSGSEFVEMFVGRGAARVRHIFERARKAAPCIIFFDEIDVLGRARSSLAGPGQSQ-EADQTLNQLLACMDGLDTSNNGVVVVAATNRYEVLDEALTRPGRFDRVVRVPLPDRQGRQDILAVHCQKLTLDEDVDLERVAELTPG 301
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Match: A0A7S2V103_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V103_9STRA) HSP 1 Score: 261 bits (666), Expect = 5.450e-83 Identity = 129/194 (66.49%), Postives = 159/194 (81.96%), Query Frame = 1
Query: 1 QELVTMIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVPFYYCSGSDFVEMFVGRGAARVRKLFEKAAKTAPCIVFLDELDALGKERSASAGGRQSNDEAEQTLNQLLASMDGLDTNNNGVMVIAATNRFDVLDSALTRPGRFDRVVRVEVPNTAGREAILKVHTRRMNLADSALLGSVAELTPG 582
+E+V +++NP P+L AGARLPSG+L+VGPPGTGKTL+ARVMA+E+GVPFYYC+GSDFVEMFVGRGAARVR LF +A K+APCI+F DELDALG++R S ++N+E +QT+NQLL +DGLDTNNNG++V+ ATNR++VLD ALTRPGRFDRVVRV P+ GR IL VHTR M + L VA LTPG
Sbjct: 177 KEIVEILRNPLPYLKAGARLPSGVLLVGPPGTGKTLLARVMAAESGVPFYYCAGSDFVEMFVGRGAARVRSLFARAQKSAPCIIFFDELDALGRKRGDSF--MRTNEEFDQTINQLLTCLDGLDTNNNGIIVVGATNRYEVLDEALTRPGRFDRVVRVPAPDQEGRREILSVHTRNMKCDEDVDLDRVAALTPG 368
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Match: A0A7S0IXE4_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IXE4_9EUKA) HSP 1 Score: 263 bits (672), Expect = 8.320e-83 Identity = 126/194 (64.95%), Postives = 166/194 (85.57%), Query Frame = 1
Query: 1 QELVTMIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVPFYYCSGSDFVEMFVGRGAARVRKLFEKAAKTAPCIVFLDELDALGKERSASAGGRQSNDEAEQTLNQLLASMDGLDTNNNGVMVIAATNRFDVLDSALTRPGRFDRVVRVEVPNTAGREAILKVHTRRMNLADSALLGSVAELTPG 582
QE+V+M++ P + AAGAR+P+G+LMVGPPGTGKTL+ARVMA++A VPF+YCSGSDFVE+F+GRGAAR+R LF++AA APC++F+DELDALGK+R+ GG+ NDE EQTLNQ+LA MDG+D++NNGV+V+ ATNR+++LD ALTRPGRFDR+VR+E+P+ AGR AIL+VHTR++ LAD L +A PG
Sbjct: 225 QEVVSMLRQPERYAAAGARVPAGVLMVGPPGTGKTLLARVMAAQAQVPFFYCSGSDFVELFIGRGAARMRALFKEAAAVAPCVIFIDELDALGKQRTLRLGGQ--NDEVEQTLNQMLACMDGVDSSNNGVVVMGATNRYEILDPALTRPGRFDRLVRMELPDDAGRLAILRVHTRKLALADDVQLARIASTAPG 416
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Match: W7U1P6_9STRA (Atp-dependent metalloprotease n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1P6_9STRA) HSP 1 Score: 265 bits (676), Expect = 1.010e-82 Identity = 133/194 (68.56%), Postives = 161/194 (82.99%), Query Frame = 1
Query: 1 QELVTMIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVPFYYCSGSDFVEMFVGRGAARVRKLFEKAAKTAPCIVFLDELDALGKERSASAGGRQSNDEAEQTLNQLLASMDGLDTNNNGVMVIAATNRFDVLDSALTRPGRFDRVVRVEVPNTAGREAILKVHTRRMNLADSALLGSVAELTPG 582
+ELV M+K+P + GARLP G+L+ GPPGTGKTL+AR +ASEAGVPF Y +GS+FVEMFVGRGAAR+R LF+KA K APCI+FLDELD LGK+RS GG SNDE EQTLNQLLA MDGLD+N +GV+VIAATNR+++LD ALTRPGR DR+VRVE+P+ +GREAIL+VHTR+ L A LG +A+LTPG
Sbjct: 330 RELVDMLKSPQKYGKLGARLPKGILLAGPPGTGKTLLARALASEAGVPFLYSAGSEFVEMFVGRGAARIRTLFQKAQKQAPCIIFLDELDTLGKQRSLRLGG--SNDEVEQTLNQLLACMDGLDSNQSGVIVIAATNRYEILDDALTRPGRLDRIVRVELPDRSGREAILRVHTRKTPLEHDADLGKIAQLTPG 521
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Match: A0A7S0LIX3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LIX3_9EUKA) HSP 1 Score: 258 bits (658), Expect = 2.920e-82 Identity = 124/194 (63.92%), Postives = 164/194 (84.54%), Query Frame = 1
Query: 1 QELVTMIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVPFYYCSGSDFVEMFVGRGAARVRKLFEKAAKTAPCIVFLDELDALGKERSASAGGRQSNDEAEQTLNQLLASMDGLDTNNNGVMVIAATNRFDVLDSALTRPGRFDRVVRVEVPNTAGREAILKVHTRRMNLADSALLGSVAELTPG 582
QE+V+M++ P + AAGAR+P+G+LMVGPPGTGKTL+ARVMA++A VPF+YCSGSDFVE+FVGRGAAR+R LF++A+ T PC++F+DELDALGK+RS GG+ NDE EQTLNQ+LA MDG+D++NNG++V+ ATNR+++LD ALTRPGRFDR+VR+E+P+ GR AIL+VHTR+++L LG VA G
Sbjct: 140 QEVVSMLREPERYAAAGARVPAGVLMVGPPGTGKTLLARVMAAQAEVPFFYCSGSDFVELFVGRGAARMRALFKEASATRPCVIFIDELDALGKQRSMRLGGQ--NDEVEQTLNQMLACMDGVDSSNNGIVVMGATNRYEILDPALTRPGRFDRLVRMELPDEEGRAAILRVHTRKLHLEPDVQLGRVAAAASG 331
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Match: A0A7R9U5K1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K1_9STRA) HSP 1 Score: 259 bits (662), Expect = 3.210e-81 Identity = 129/194 (66.49%), Postives = 160/194 (82.47%), Query Frame = 1
Query: 1 QELVTMIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVPFYYCSGSDFVEMFVGRGAARVRKLFEKAAKTAPCIVFLDELDALGKERSASAGGRQSNDEAEQTLNQLLASMDGLDTNNNGVMVIAATNRFDVLDSALTRPGRFDRVVRVEVPNTAGREAILKVHTRRMNLADSALLGSVAELTPG 582
+E+VTM+++P +LAAGAR+P+G+L+VGPPGTGKTL+AR MA EA VPF+YC+GSDFVEMFVGRGAARVR LFEKA K +PCI+F+DELDALGK+RS ++ NDEAEQTLNQLLA MDGLD + G++V+ ATNR+D+LD ALTRPGRFDR+V V P+ GR IL+VH R++NLA S L +A LTPG
Sbjct: 275 REIVTMLRDPQKYLAAGARIPAGVLLVGPPGTGKTLLARCMAGEARVPFFYCTGSDFVEMFVGRGAARVRTLFEKAKKASPCILFIDELDALGKQRSFRL--QRGNDEAEQTLNQLLACMDGLDKSGRGIIVLGATNRYDILDEALTRPGRFDRIVTVNPPDRDGRRDILQVHCRKLNLAPSVDLRQIANLTPG 466 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22890.6114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22890.6114.1 >prot_H-paniculata_contig22890.6114.1 ID=prot_H-paniculata_contig22890.6114.1|Name=mRNA_H-paniculata_contig22890.6114.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp MIKNPGPFLAAGARLPSGLLMVGPPGTGKTLMARVMASEAGVPFYYCSGSback to top mRNA from alignment at H-paniculata_contig22890:275..3431+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22890.6114.1 ID=mRNA_H-paniculata_contig22890.6114.1|Name=mRNA_H-paniculata_contig22890.6114.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3157bp|location=Sequence derived from alignment at H-paniculata_contig22890:275..3431+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22890:275..3431+ >mRNA_H-paniculata_contig22890.6114.1 ID=mRNA_H-paniculata_contig22890.6114.1|Name=mRNA_H-paniculata_contig22890.6114.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1134bp|location=Sequence derived from alignment at H-paniculata_contig22890:275..3431+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |