prot_H-paniculata_contig22860.6106.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22860.6106.1
Unique Nameprot_H-paniculata_contig22860.6106.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length101
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22860.6106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 4..50
e-value: 0.0065
score: 25.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..68
e-value: 1.5E-12
score: 48.8
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 5..51
e-value: 4.2E-7
score: 29.7
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 5..49
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 3..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22860contigH-paniculata_contig22860:593..1238 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22860.6106.1mRNA_H-paniculata_contig22860.6106.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22860 570..1238 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22860.6106.1 ID=prot_H-paniculata_contig22860.6106.1|Name=mRNA_H-paniculata_contig22860.6106.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
MDIDCPCGKQRETQGYIQCNGCQAWLHYECTGTNADEAANDTSYKCQDCA
SAATSSSSKKSSNKRKPVFSDDQRKDNDAFDTAPPNPKKQKTGTPGKSKA
I
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD