mRNA_H-paniculata_contig2286.6103.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2286.6103.1
Unique NamemRNA_H-paniculata_contig2286.6103.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Match: D7FRQ9_ECTSI (Dynein light intermediate chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ9_ECTSI)

HSP 1 Score: 461 bits (1187), Expect = 5.800e-143
Identity = 322/496 (64.92%), Postives = 360/496 (72.58%), Query Frame = 1 
Query:  577 KQRPPTSANIPAGNASGNSNATGPNLWETMLRDAMRRNRLPDGTLVFVGPQGCGKSSLLDTFLEGSFMSTSLANPSGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATALGFHPVLAYSYLDATDPREQGPERDDSPPRVSVWCCSELEFEGLLQTVLRPAVLEHTCVAVGVDLSRPWELMETLEKWSAVLERHLTGLMKQLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGAGSSGSDEL--VKESVLEKNLGAPIVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQTTDVAFIPAGWDSKPLIDGLLSPDKTPWGPNAAFEDVVVPPPHAL-RSAEG-GMG--VSGSGGGRXXXXXXXXXTGVSGTSATDESIEEVETEEYWLSSLGKQVAGS---SRWPSAIAKAKEAAKAAK 2037
            KQ+    A   A      + A   NLWETMLRDAMRR+RLP  TLVFVGP+GCGKSSLLDTFLEG   S S  NPSG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                         FHPVL+Y+YLDA DP EQG ERD+SPPRVSVW CS LEFE LL+TVLRP  L +  V V VDLSRPWE+M+++EKW+  +E+H+T L+ QLS+GAQDDLRSA+K+RL     + G                  + + VLE+NLG P+VVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKD VNC LLHRYLLSC+YPDAF  ++EGQT+D AFIPAGWDSK LIDGLLSPDKTPWGPNA F +VVVPPP A+ R A G GMG  + G  GG XXXXXXXXX          E+   VE+EE WLSSLGKQVAG+   SRWPSAIA A + AKA+K
Sbjct:    5 KQQKHAPAPASASTVGATTAAATANLWETMLRDAMRRSRLPSSTLVFVGPKGCGKSSLLDTFLEGQG-SASTNNPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPI------------------AGQAFHPVLSYAYLDAADPAEQGAERDESPPRVSVWSCSGLEFEPLLETVLRPEELPNMAVVVAVDLSRPWEVMDSVEKWTTAMEKHVTSLLLQLSVGAQDDLRSAVKERLRGKAKEIGGXXXXXXXXXXXXXXXXGLGDGVLERNLGVPMVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDSVNCSLLHRYLLSCVYPDAFSFSEEGQTSDAAFIPAGWDSKRLIDGLLSPDKTPWGPNATFAEVVVPPPGAVGRGASGSGMGGWMDGDSGGXXXXXXXXXXXXXXXXXXXXET---VESEEAWLSSLGKQVAGTDSKSRWPSAIAAAAKHAKASK 478
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BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Match: A0A7S3XSQ8_HETAK (Dynein light intermediate chain (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSQ8_HETAK)

HSP 1 Score: 217 bits (553), Expect = 4.370e-59
Identity = 113/272 (41.54%), Postives = 156/272 (57.35%), Query Frame = 1 
Query: 1027 PVLAYSYLDATDPREQGPERDDSPPRVSVWCCSELEFEGLLQTVLRPAVLEHTCVAVGVDLSRPWELMETLEKWSAVLERHLTGLMKQLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGAGSSGSDELVKESVLEKNLGAPIVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQ------TTDVAFIPAGWDSKPLIDGLLSPDKTPWGPNAAFEDVVVPPPHALRSAEG 1824
            PVL YS++DA D      ERDD+P R+S W   ++ FE LL        L+HT +A+ +DLS+PW+LM  LEKW  VLER +  +  QLS+G QD+L     D +++                    E+   S +++NLG P++V+GCK D++++ETFE QQ+L FIQQ LR+FC +YGAAL + SA+ G N G L  YLL   +P  FP              D  FIP+GWD+  LI+ L    KT W P+AAFE V+ PP  +L   +G
Sbjct:   79 PVLFYSFMDAVDLTANEFERDDTPARISTWSLGDVSFENLLSIPFTAEKLKHTMIAITLDLSKPWDLMRNLEKWVKVLERAIVKVRSQLSVGDQDELMQIQNDYIAS------------------QTEVENSSKIQRNLGVPLMVIGCKLDAIEAETFEHQQKLQFIQQHLRKFCYQYGAALCFASARAGTNLGRLRGYLLHRAHPGHFPGGXXXXXXXAQVANDELFIPSGWDTMKLIEDLEQA-KTSWAPDAAFETVITPPAESLEEVKG 331
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BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Match: A0A6A4FS02_9STRA (Dynein light intermediate chain n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FS02_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.990e-36
Identity = 89/258 (34.50%), Postives = 145/258 (56.20%), Query Frame = 1 
Query: 1030 VLAYSYLDATDPREQGPERDDSPPRVSVWCCSELEFEGLLQTVLRPAVLEHTCVAVGVDLSRPWELMETLEKWSAVLERHLTGLMKQLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGAGSSGSDELVKESVLEKNLGAPIVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQTTD--VAFIPAGWDSKPLIDGLLSPDKTPWGPNAAFEDVVVPP 1797
            +LA+  LD  DPR +  E +D    +  W  ++L  + L++  ++P  L+ T VA+ +DLSRPW +  +LE+W + LE  L   + QL+  A+++L +AIK  + A        + P+   +S ++E ++E VL KNLG P+V+V  KAD       E   ++ +I+ +LR+F ++YGA++V+TSAK G N   L +Y+L   YP  F   +  Q  D    FIP+G+DS  L++  L   +  W  +  FE +V  P
Sbjct:   63 LLAFKTLDVLDPRAK--ESEDVMAHIGTWSLNDLNLKDLIKIAVKPQTLQKTVVAIVLDLSRPWTIKSSLEQWLSALEGQLLEQINQLTPEARNELYTAIKQHILAYEDPSVDHSEPTPMDTS-TNEFMEEGVLSKNLGVPLVIVVAKADL----RLENSVKMDYIEYTLRQFAIRYGASVVFTSAKTGSNVDTLRKYILYRAYPSQFKFIEPPQLVDHNSLFIPSGYDSFDLVNQSLVGSQARWPTDKPFEKIVSAP 313
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BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Match: A0A421FAE9_9STRA (Dynein light intermediate chain n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FAE9_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.630e-36
Identity = 91/270 (33.70%), Postives = 148/270 (54.81%), Query Frame = 1 
Query: 1003 AATALGFHPVLAYSYLDATDPREQ---GPERDDSPPRVSVWCCSELEFEGLLQTVLRPAVLEHTCVAVGVDLSRPWELMETLEKWSAVLERHLTGLMKQLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGAGSSGSDELVKESVLEKNLGAPIVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQTTD--VAFIPAGWDSKPLIDGLLSPDKTPWGPNAAFEDVVVPP 1797
            AA A     +LAY+ +D  DPR +   G   +D    +  W  ++L  + L++  ++P  L+ T VA+ +D+SRPW +  +LE+W + LE  L   + QLS  A+++L +AIK  +          + P+   +S ++E ++E VL KNLG P+V+V  KAD       E   ++ +I+ +LR+F ++YGA++V+TSAK G N   L +Y+L   YP  F   +  Q  D    FIP+G+DS  L++  L   +  W  +  FE +V  P
Sbjct:   58 AADAHAVDTLLAYTTVDVLDPRAKESGGDASEDVMAHIGTWSLNDLSLKDLIKIAVKPQNLQKTVVAIVLDMSRPWTIKSSLEQWLSALEGQLLEQINQLSPEARNELYAAIKQHILTYEDPSVDHSAPTPMDTS-TNEFMEEGVLSKNLGVPLVIVVAKADLRP----ENSVKMDYIEYTLRQFAIRYGASVVFTSAKSGTNVNALRKYILHRAYPTQFKFTEAPQLVDHNSIFIPSGYDSFELVNQSLVGSQARWPIDKPFEKIVPAP 322
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BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Match: M4BRF2_HYAAE (Dynein light intermediate chain n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRF2_HYAAE)

HSP 1 Score: 154 bits (389), Expect = 2.750e-36
Identity = 94/262 (35.88%), Postives = 145/262 (55.34%), Query Frame = 1 
Query: 1030 VLAYSYLDATDPRE----QGPERDDSPPRVSVWCCSELEFEGLLQTVLRPAVLEHTCVAVGVDLSRPWELMETLEKWSAVLERHLTGLMKQLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGAGSSGSDELVKESVLEKNLGAPIVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQTTD--VAFIPAGWDSKPLIDGLLSPDKTPWGPNAAFEDVVVPP 1797
            +LA+  LD  DPR     +  E DD    V  W  ++L  + L++ V++P  L  T VAV +DLSRPW +  +LE+W + LE  L   + QL+  A+++L +AIK  + A        + P+   +S S E ++E VL KNLG P++ V  KAD L+ E   Q   + +I+ +LRR  ++YGA++V+TSAK G N   L +Y+L   +P  F   +  Q  D    FIP+G+DS  L++  L+  +  W  +  FE +V  P
Sbjct:   64 LLAFQTLDVLDPRAKESGESQESDDVIAHVETWSLNDLSLKDLIKMVVKPQTLYKTVVAVVLDLSRPWTIKSSLEQWLSALEGQLLDQINQLTSEARNELYAAIKQHILAYEDPSIDHSVPTPMDTSAS-EFMEEGVLSKNLGVPLIFVVAKAD-LRPENSVQ---MDYIEYTLRRVAVRYGASVVFTSAKTGSNVDTLRKYILHRAHPSQFKFTEPPQLVDHNTIFIPSGYDSFELVENSLAGSQARWPTDKPFEKIVPAP 320
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BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Match: G4ZC79_PHYSP (Dynein light intermediate chain n=19 Tax=Phytophthora TaxID=4783 RepID=G4ZC79_PHYSP)

HSP 1 Score: 153 bits (386), Expect = 6.000e-36
Identity = 89/261 (34.10%), Postives = 146/261 (55.94%), Query Frame = 1 
Query: 1030 VLAYSYLDATDPREQ---GPERDDSPPRVSVWCCSELEFEGLLQTVLRPAVLEHTCVAVGVDLSRPWELMETLEKWSAVLERHLTGLMKQLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGAGSSGSDELVKESVLEKNLGAPIVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQTTD--VAFIPAGWDSKPLIDGLLSPDKTPWGPNAAFEDVVVPP 1797
            +LA+  LD  DPR +   G   +D   ++  W  ++L  + L++  ++P  L+ T VA+ +DLSRPW +  +LE+W + LE  L   + QL+  A+++L +AIK  + A        + P+   +S ++E ++E VL KNLG P+V+V  KAD       E   ++ +I+ +LR+F ++YGA++V+TSAK G N   L +Y+L   YP  F   +  Q  D    FIP+G+DS  L++  L   +  W  +  FE +V  P
Sbjct:   53 LLAFKTLDVLDPRAKESGGDASEDVMAQIGTWSLNDLNLKDLIKIAVKPRTLQKTVVAIVLDLSRPWTIKSSLEQWLSALEGQLLEQINQLAPEARNELYAAIKQHILAYEDPTVDHSAPTPMDTS-TNEFMEEGVLSKNLGVPLVLVVAKADLRP----ENSVKMDYIEYTLRQFAIRYGASVVFTSAKTGSNVDTLRKYILHRAYPSQFKFTEPPQLVDHNSLFIPSGYDSFELVNQSLVGSQARWPTDKPFEKIVPAP 308
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BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Match: A0A7S2V3Z7_9STRA (Dynein light intermediate chain n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z7_9STRA)

HSP 1 Score: 139 bits (351), Expect = 3.220e-33
Identity = 82/179 (45.81%), Postives = 104/179 (58.10%), Query Frame = 1 
Query: 1288 QLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGAGSSGSDELVKESV--LEKNLGAPIVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQTT-DVAFIPAGWDSKPLIDGLLSPDKTPWGPNAAFEDVVVPPPHALRS 1815
            +L  G QD L  A  + LSA               ++G +   K++V  L  NLG PI+V+GCKAD L+SETFEQQQRL FIQQ LR  CL YGA L+Y S+  G N  LLHRYLL  +YPD F   DE +   D  FIP+GWDS  LI+ L    K+PW  +A ++ V+  P   L +
Sbjct:   11 KLPPGQQDALNLAYSEYLSA-------------MANAGPETEKKKNVEWLTNNLGVPILVIGCKADKLESETFEQQQRLQFIQQHLRNCCLPYGAGLLYCSSHGGTNMNLLHRYLLHRLYPDMFSLKDEAKVANDSVFIPSGWDSPSLIEDLKQA-KSPWEADATYDQVIRIPTDVLEA 175
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BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Match: A0A835Z2Q1_9STRA (Dynein light intermediate chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q1_9STRA)

HSP 1 Score: 144 bits (364), Expect = 6.120e-33
Identity = 102/291 (35.05%), Postives = 128/291 (43.99%), Query Frame = 1 
Query: 1021 FHPVLAYSYLDATDPREQ---GPERDDSPPRVSVWCCSELEFEGLLQTVLR--------PA---VLEHTCVAVGVDLSRPWELMETLEKWSAVLERHLTGLMKQLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGAGSSGSDELVKESVLEKNLGAPIVVVGCKADSL---QSET---FEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQTTDVAFIPAGWDSKPLIDGLLSPDKTPWGPNAAFEDVVVPPPHALRSAEGGMG 1833
            FHPVLAY Y +A D   Q   G    DSPPRVSVW CS+  F  +L  V          PA   V       V VDL+RPWE +   E W A LE            G + D R+                                            VVVGCK D+    + E+    E+Q+R  F+Q+ LRR CL+ GAALVY SA+ G NC  L R +L  +YP AF C  + Q +   +IP GWDS  L+D L+      W  +  +   V+PPP   R  EGG G
Sbjct:   70 FHPVLAYDYFEARDAAAQSSSGSAFSDSPPRVSVWSCSDARFVDILTAVTASTQHAPPPPAAAGVAAPALALVAVDLTRPWEAVPAAEAWLAALE------------GVRGDARA--------------------------------------------VVVGCKLDAAGGAERESGGGMERQRRELFVQRRLRRLCLERGAALVYASARTGDNCAALQRLVLHRLYPSAFSCAPDAQVSGAVYIPWGWDSLELVDALMGGGVAGWSDDLPYAK-VLPPPQGAR--EGGRG 301
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BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Match: F0VZ01_9STRA (Dynein light intermediate chain n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZ01_9STRA)

HSP 1 Score: 144 bits (363), Expect = 9.530e-33
Identity = 85/245 (34.69%), Postives = 136/245 (55.51%), Query Frame = 1 
Query: 1081 ERDDSPPRVSVWCCSELEFEGLLQTVLRPAVLEHTCVAVGVDLSRPWELMETLEKWSAVLERHLTGLMKQLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGA----GSSGSDELVKESVLEKNLGAPIVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQTTD--VAFIPAGWDSKPLIDGLLSPDKTPWGPNAAFEDVVVPP 1797
            E D+S   ++ W  ++L+   LLQ  L+ + LE +  AV VDLS PW + +++EKW++ LE  +   M Q+    +  L  +IK+ L   Y + G G  PS       SS  +E ++E +L+KNLG P V++  K+D L+ E+  Q   + +++ S+R F ++YGAA+ YTSAK   N  LL +Y+L    P  F  N+  Q  +    F+P+G+DS  LI+  L   +  W P+  FE ++  P
Sbjct:  101 EADESIAMINAWSLNDLDLHELLQIALQSSTLEFSVAAVTVDLSSPWSMQKSIEKWTSALEGAILQQMSQIDPQKRSSLYQSIKNHL-LDYGEPGMGGQPSDTRGPMDSSSRNEFLEEGILDKNLGIPFVIIVTKSD-LRPESSLQ---VDYLEYSIRMFAIRYGAAVFYTSAKTESNIALLQKYILHRACPAQFSYNEAPQLIERGAIFLPSGYDSVSLINQSLVGSQPRWQPDTPFEKIIPDP 340
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BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Match: A0A7K5FCP2_PROAR (Dynein light intermediate chain (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7K5FCP2_PROAR)

HSP 1 Score: 143 bits (361), Expect = 1.370e-32
Identity = 100/265 (37.74%), Postives = 142/265 (53.58%), Query Frame = 1 
Query: 1033 LAYSYLDATDPREQGPERDDSPPRVSVWCCS-ELEFEGLLQTVLRPAVLEHTCVAVGVDLSRPWELMETLEKWSAVLERHLTGLMKQLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGAGSSGS-DELVK----ESVLEKNLGAPIVVVGCKADS---LQSETFEQQQRLHFIQQSLRRFCLKYGAALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQTTDVAFIPAGWDSKPLIDGLLSPDKTPWGPNAAFEDVVVPPP 1800
            L Y YL+  D      +RDD   R +VW    +L  +GLL+  +    L+ T V    D+SRPW +ME+L+KW++VL+ H+   MK      +D  R  IK+      P+ G   +P   G SG  DE V     E+VL  NLG P++VV  K D+   L+ E   +++   FIQ  +RRFCL+YGAAL+YTS K+  N  LL++Y++   Y   F         D  FIPAGWD++  I  +L  + T   P  A+ED +V PP
Sbjct:   50 LEYLYLNIHDE-----DRDDHT-RCNVWILDGDLYHKGLLKFAVSAESLQDTIVVFVADMSRPWTVMESLQKWASVLQEHIDK-MKIPPEEMRDMERKFIKEFQEYVEPEEGYQGSPQRRGPSGQEDEHVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFQFTTPALVVEKDAVFIPAGWDNEKKI-AILHENFTTVKPEDAYEDFIVKPP 306
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2286.6103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ9_ECTSI5.800e-14364.92Dynein light intermediate chain n=2 Tax=Ectocarpus... [more]
A0A7S3XSQ8_HETAK4.370e-5941.54Dynein light intermediate chain (Fragment) n=1 Tax... [more]
A0A6A4FS02_9STRA1.990e-3634.50Dynein light intermediate chain n=1 Tax=Phytophtho... [more]
A0A421FAE9_9STRA2.630e-3633.70Dynein light intermediate chain n=5 Tax=Phytophtho... [more]
M4BRF2_HYAAE2.750e-3635.88Dynein light intermediate chain n=1 Tax=Hyaloperon... [more]
G4ZC79_PHYSP6.000e-3634.10Dynein light intermediate chain n=19 Tax=Phytophth... [more]
A0A7S2V3Z7_9STRA3.220e-3345.81Dynein light intermediate chain n=1 Tax=Fibrocapsa... [more]
A0A835Z2Q1_9STRA6.120e-3335.05Dynein light intermediate chain n=1 Tax=Tribonema ... [more]
F0VZ01_9STRA9.530e-3334.69Dynein light intermediate chain n=1 Tax=Albugo lai... [more]
A0A7K5FCP2_PROAR1.370e-3237.74Dynein light intermediate chain (Fragment) n=2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2286contigH-paniculata_contig2286:4576..12345 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score465.3
Seed ortholog evalue4.3e-128
Seed eggNOG ortholog2880.D7FRQ9
Preferred nameDYNC1LI1
KEGG koko:K03685,ko:K10416
KEGG Pathwayko03008,ko04145,ko04962,ko05132,ko05205,map03008,map04145,map04962,map05132,map05205
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000226,GO:0000278,GO:0000775,GO:0000776,GO:0000902,GO:0000904,GO:0000922,GO:0001775,GO:0001882,GO:0001883,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0003006,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005868,GO:0005874,GO:0005875,GO:0005886,GO:0006403,GO:0006810,GO:0006887,GO:0006888,GO:0006928,GO:0006955,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007088,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007399,GO:0007409,GO:0008088,GO:0008090,GO:0008150,GO:0009653,GO:0009719,GO:0009987,GO:0010033,GO:0010564,GO:0010769,GO:0010965,GO:0010970,GO:0010975,GO:0012505,GO:0012506,GO:0015630,GO:0015931,GO:0016020,GO:0016043,GO:0016192,GO:0016358,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019882,GO:0019884,GO:0019886,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0030030,GO:0030071,GO:0030141,GO:0030154,GO:0030182,GO:0030286,GO:0030659,GO:0030667,GO:0030705,GO:0031090,GO:0031175,GO:0031344,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032886,GO:0032940,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0035371,GO:0036094,GO:0036230,GO:0042119,GO:0042221,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043299,GO:0043312,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045321,GO:0045504,GO:0045595,GO:0045664,GO:0045787,GO:0045931,GO:0046605,GO:0046903,GO:0046907,GO:0048002,GO:0048193,GO:0048468,GO:0048477,GO:0048518,GO:0048522,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048813,GO:0048814,GO:0048856,GO:0048858,GO:0048869,GO:0050657,GO:0050658,GO:0050767,GO:0050773,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051028,GO:0051128,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051259,GO:0051260,GO:0051493,GO:0051640,GO:0051641,GO:0051642,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051960,GO:0051983,GO:0060284,GO:0061564,GO:0061842,GO:0065003,GO:0065007,GO:0070507,GO:0070820,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090068,GO:0090231,GO:0090232,GO:0090266,GO:0090267,GO:0097159,GO:0097367,GO:0097458,GO:0097708,GO:0098588,GO:0098687,GO:0098805,GO:0098930,GO:0099080,GO:0099081,GO:0099111,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0101003,GO:0120025,GO:0120035,GO:0120036,GO:0120039,GO:1901265,GO:1901363,GO:1901976,GO:1901978,GO:1901987,GO:1901990,GO:1902099,GO:1902494,GO:1902850,GO:1903047,GO:1903504,GO:1905818,GO:1990089,GO:1990090,GO:1990752,GO:2000026
EggNOG free text desc.dynein heavy chain binding
EggNOG OGsKOG3905@1,KOG3905@2759
Ec32 ortholog descriptionD1LIC, cytoplasmic dynein 1 light intermediate chain
Ec32 orthologEc-00_003490.1
EC3.1.26.3
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03019,ko03036,ko04131,ko04812
Exons6
Model size5173
Cds size1797
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2286.6103.1prot_H-paniculata_contig2286.6103.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2286 8118..11829 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929637.0708532-UTR-H-paniculata_contig2286:4575..63571622929637.0708532-UTR-H-paniculata_contig2286:4575..6357Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2286 4576..6357 -
1691480946.0109875-UTR-H-paniculata_contig2286:4575..63571691480946.0109875-UTR-H-paniculata_contig2286:4575..6357Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2286 4576..6357 -
1622929637.0884683-UTR-H-paniculata_contig2286:7018..71111622929637.0884683-UTR-H-paniculata_contig2286:7018..7111Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2286 7019..7111 -
1691480946.03163-UTR-H-paniculata_contig2286:7018..71111691480946.03163-UTR-H-paniculata_contig2286:7018..7111Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2286 7019..7111 -
1622929637.1030593-UTR-H-paniculata_contig2286:7132..81171622929637.1030593-UTR-H-paniculata_contig2286:7132..8117Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2286 7133..8117 -
1691480946.044835-UTR-H-paniculata_contig2286:7132..81171691480946.044835-UTR-H-paniculata_contig2286:7132..8117Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2286 7133..8117 -
1622929637.2100635-UTR-H-paniculata_contig2286:11829..123451622929637.2100635-UTR-H-paniculata_contig2286:11829..12345Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2286 11830..12345 -
1691480946.0946314-UTR-H-paniculata_contig2286:11829..123451691480946.0946314-UTR-H-paniculata_contig2286:11829..12345Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2286 11830..12345 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929637.1166663-CDS-H-paniculata_contig2286:8117..87561622929637.1166663-CDS-H-paniculata_contig2286:8117..8756Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2286 8118..8756 -
1691480946.0573177-CDS-H-paniculata_contig2286:8117..87561691480946.0573177-CDS-H-paniculata_contig2286:8117..8756Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2286 8118..8756 -
1622929637.1353962-CDS-H-paniculata_contig2286:9386..95021622929637.1353962-CDS-H-paniculata_contig2286:9386..9502Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2286 9387..9502 -
1691480946.0673666-CDS-H-paniculata_contig2286:9386..95021691480946.0673666-CDS-H-paniculata_contig2286:9386..9502Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2286 9387..9502 -
1622929637.1567633-CDS-H-paniculata_contig2286:10116..104291622929637.1567633-CDS-H-paniculata_contig2286:10116..10429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2286 10117..10429 -
1691480946.0761669-CDS-H-paniculata_contig2286:10116..104291691480946.0761669-CDS-H-paniculata_contig2286:10116..10429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2286 10117..10429 -
1622929637.1948626-CDS-H-paniculata_contig2286:11100..118291622929637.1948626-CDS-H-paniculata_contig2286:11100..11829Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2286 11101..11829 -
1691480946.0852742-CDS-H-paniculata_contig2286:11100..118291691480946.0852742-CDS-H-paniculata_contig2286:11100..11829Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2286 11101..11829 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2286.6103.1

>prot_H-paniculata_contig2286.6103.1 ID=prot_H-paniculata_contig2286.6103.1|Name=mRNA_H-paniculata_contig2286.6103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=599bp
MATGAIRMQQQRLQPPKTPLKQRPPTSANIPAGNASGNSNATGPNLWETM
LRDAMRRNRLPDGTLVFVGPQGCGKSSLLDTFLEGSFMSTSLANPSGAAA
AATSATAAATMPPVGDSGPEGGAGGGASGGASGTGGAGGGSSGAGDGQQQ
QQQQQQQQQQQQAATALGFHPVLAYSYLDATDPREQGPERDDSPPRVSVW
CCSELEFEGLLQTVLRPAVLEHTCVAVGVDLSRPWELMETLEKWSAVLER
HLTGLMKQLSLGAQDDLRSAIKDRLSAGYPQGGSGNTPSGAGSSGSDELV
KESVLEKNLGAPIVVVGCKADSLQSETFEQQQRLHFIQQSLRRFCLKYGA
ALVYTSAKDGVNCGLLHRYLLSCIYPDAFPCNDEGQTTDVAFIPAGWDSK
PLIDGLLSPDKTPWGPNAAFEDVVVPPPHALRSAEGGMGVSGSGGGRAAG
GGGRAGTGVSGTSATDESIEEVETEEYWLSSLGKQVAGSSRWPSAIAKAK
EAAKAAKVVIMHSSIVSPRLCSRGDTMVQRSVSYGNESDGYEVVYSTKGL
VSREYLLEAEMWLFSCFRCVTCFSRIRGRKSKIFRSILSFVRKRPACW*
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mRNA from alignment at H-paniculata_contig2286:4576..12345-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2286.6103.1 ID=mRNA_H-paniculata_contig2286.6103.1|Name=mRNA_H-paniculata_contig2286.6103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7770bp|location=Sequence derived from alignment at H-paniculata_contig2286:4576..12345- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATTAAGCTCTGCTGGGAGTACATACTGTTGCTGTTGCGATGGTTACATG
CTAGGAATGACCTGTGCTCGCTTCCCAATTTTCTGCAGTACCCTTCACCC
CAAAATTCTGGACGGTTATATTCGGCATCAAGACAACCTTGTACAGACTT
CAAACACAGATAGAGAAGGTCTATCACTTTTCTCTTTCGGGCAGGTTGAC
TGCGAATTCAAACGCGCCCACAGCCTTTTACACAGCGAACACGGCGGCTA
CGTTGGGTGAAACAGGTTTGCTCGGACCCGGCGTTGCGTGCGGAGTGTGG
CAGAGGTCCTTCCTACGCCGGTGTGCAGCACACTTCAACATTCGCTGTGG
CCAGTGGTTTCGTCCAACCAGACCAACGGCACCACTGTATTCTTCAACGT
CGACAGCGGAACACGTTTCGATCACACGGACAAGAAATTCGTTGCGACCC
ACACCAACACTACGTACCAAAGCAACTGCAACAAACAGCATTGCATGGTA
GGGCAAGGGCACCACCATGGCGACAGGAGCAATTCGAATGCAGCAGCAGC
GACTGCAACCGCCAAAAACACCTCTAAAGCAAAGACCTCCCACTTCTGCT
AATATTCCAGCAGGCAATGCATCTGGCAACAGCAATGCCACCGGGCCCAA
CTTGTGGGAAACCATGCTGCGAGACGCCATGCGCAGAAACCGTCTCCCTG
ACGGTACCCTAGTATTTGTCGGCCCACAGGGCTGTGGTAAGTCCTCCCTA
CTCGATACCTTCCTGGAAGGCTCGTTCATGTCGACATCCCTAGCGAACCC
GTCGGGTGCAGCAGCCGCTGCTACCTCCGCCACCGCGGCCGCGACAATGC
CACCGGTCGGCGATTCCGGTCCTGAGGGTGGCGCCGGGGGAGGAGCTAGT
GGCGGCGCCAGCGGTACAGGTGGCGCGGGGGGAGGCTCTAGCGGCGCGGG
CGACGGGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAGCAGC
AAGCAGCGACTGCTCTCGGTTTTCACCCCGTACTTGCATACTCGTATCTA
GATGCAACGGACCCAAGAGAACAGGGTCCAGAAAGGGACGACTCGCCGCC
GAGGGTCAGTGTCTGGTGCTGCAGCGAGCTAGAGTTTGAGGGTTTGTTGC
AGACGGTTTTGCGGCCGGCCGTGCTTGAACACACGTGCGTTGCCGTTGGC
GTGGATTTGTCCAGGCCGTGGGAACTCATGGAAACCCTTGAGAAGGTGAA
TTTATTAAAGGGGGAGCCGGGGGGGGTTGGGGTGACATGATGCTTGATGC
CATATTTTCTGTTGATGGACTCTGGCATGTACCAGGTTCTAAAATCAAGC
ATACCTCGATCGCCATAGTTAGCCTTTGAGTCGTGAGCCGTTGCAAGGTG
GATTATTGGTGTTATCTTCGGCTGCGTATTCCAATGTTTTGTGTCTTGCG
TGTTGCCCGTATTGATTTTACCTGTCGTGTTGCACCTCTTTGGTGCGTTG
TTTTGAACCTTGCTCGAGCGTTTTTCGATGTGTCAAAGTTGCGCATTTGG
CTACATATTCGCAGAGGAAGCAGTCTGAAATCGTCACCCTGATTCGTAGA
TGTCGAGCTACAGTGCATGCATGATGTATCATGCAGCATAGATTGTGCAG
AAAAATGGCTATTTTGGACGAACAACACCTTGACAGCCAGCTGATGTGGT
TTCCACGTTACTGTGTTGAAAAATACTGGGGGACCTCTGGATAAAAGGTT
AGCTGCTGCCCCCAGTGCATCGGATTCCGCGTTATTAATTTGGCGCGATT
AATTCTTGCTAATCCAGCGCGATGATCGACATGTATAGTGCTAACACAAT
TACCTTTCGCTGTAATCACTCTATGACCCCAATATATTCCTTTCACCAAC
GTAAAAACCAAAAAAGTGGTCCGCTGTGTTGGAAAGGCATTTGACGGGGC
TCATGAAACAACTCTCCTTGGGCGCCCAAGACGACTTGCGTTCAGCGATA
AAGGACAGGCTATCGGCAGGGTACCCGCAGGGCGGCAGCGGTAACACGCC
GTCCGGAGCCGGAAGTAGCGGTAGTGACGAATTGGTCAAGGAGAGTGTTT
TGGAGAAGAACTTGGGCGCTCCGATCGTGGTGGTGGGGTGCAAGGCGGAC
TCTCTGCAAAGCGAGACTTTCGAGCAGCAACAGCGGTTGCACTTCATTCA
GCAGAGCCTTCGGCGGTTCTGCCTCAAATGTGAGATGCTGTGATGTTTTG
AGGTGGGATGCTGTTCAAGGGTCATGCTTCCTGCAATGGCGAGAAACGGC
CACAATTAGGCCGTATGGTAACGAGCTCCCGCCAAAACAACGATGTCAAC
AGGCAGAATTAAAATCTCTAGTGGAGCCTCTTCGGTGCCTCTCGGGATAT
CGCTTTAGTCGGGCTGGGTGAGGAGCGGCGGATATGATGAGAGGCAGCCA
TGATTTCCCATCACTGATACTGCCAAACTCTAATTCATCTTCGTTCTGTA
GAGCTTTAGGTCGTATGTTCGTGAAGCATGCATGGTCTTGGGGGAAAAGT
ACACAGGGTATCTTGGCTATTGCATTAGTTATTTCATGACTTGGTTAAAA
CCGCAGTGTTTCCCGTCCTCAACCACTTTCTCATTCTGCCTCATGTACAC
AGATCAAGAATATGCAAAATTACACCCCCCTTCAGCACCTTTACCTTCGT
AAGAGGGCCCTGTGATGGCCTTTCAGACTTTGTTCCTCGTTGGGTCCGCG
AAGGCGACCGCTCGCCGGTGCCATACCACCCTTACGTGCGTGCCTGTTTG
CGTCTATGACCACAAATCCCACGTCGCGAACGGACGTTTTCAGACGGGGC
GGCGCTGGTGTACACGTCGGCGAAAGATGGTGTGAACTGCGGGCTGCTTC
ACCGATACCTGCTCAGCTGCATCTATCCTGACGCGTTTCCGTGTAACGAT
GAGGGGCAGGTACGTTGACCATCATCTATTAGTCACCGATCTCACGCCCT
GCACTTGTACCTGATTTGGTTTGACAGCCAGGGTTCAGGAGGAGATCGTA
TTGCTGCTGTCGCTGTTTCTATGTTTCAAGTGCTCTTTGTAGTGTATCTG
TGTTTTGTTTCACCACAGATTCCGGTTTCCTTAGTCGCGGCGACCCGTAC
ACCACACCGCATCGTCCATGTTGTCAGTGTGCGACGGTGTTGATGAACTG
GAATCCATCCACAATCTGTTCCACTCTCGAAGGCTCCCCCATGCGTATCT
CAACGCTGCCTTCTATCCAGTTGTATTGGCACAGTTTTTTGCGTACGTGT
GTTGATATTGTTCCCGGGTTGTCGCTGCCAGTTCGAAGGAAGAAAGTGGA
CAACGTGATAAAATATCGTGAATGGTGTGGTGAAGTGATGTCTTGCTACT
TTTTCGTTCGCAGCTCAAAGCTACACAAATCAAAAATAGGAACAACATCA
ACCTTCCCGTCGCCCTCGCGCCGTTCCGATAGTACCACCATCTACTGTTC
TACTTGGAAACTACAATTGTTTTCAACACGAGCACAGGAGACGGCCAGCA
AGTTTTTTTTTTTTTTTTTTTTAATTCTCGAAAACACAGACAACCGACGT
CGCTTTCATTCCGGCGGGATGGGACTCGAAACCCCTCATCGACGGCCTCC
TGTCACCGGACAAAACACCGTGGGGTCCGAATGCAGCTTTCGAAGACGTG
GTGGTCCCTCCACCGCATGCGTTGAGGAGTGCAGAAGGAGGTATGGGCGT
CAGCGGTAGCGGCGGAGGTCGCGCAGCCGGCGGTGGAGGTCGAGCGGGAA
CCGGCGTCAGCGGCACTTCAGCGACTGATGAGTCGATTGAGGAGGTGGAG
ACGGAGGAGTATTGGCTTTCGAGTCTCGGGAAACAGGTCGCCGGGTCATC
TCGCTGGCCGTCAGCCATCGCTAAGGCTAAGGAAGCAGCGAAGGCGGCGA
AGGTGGTTATAATGCACAGTAGCATAGTCTCCCCGAGGTTGTGCAGTCGT
GGGGACACGATGGTGCAGCGATCGGTCTCTTACGGGAACGAGAGTGACGG
CTACGAAGTTGTATATTCTACGAAAGGGTTGGTTTCTCGAGAGTACTTGC
TCGAGGCTGAAATGTGGTTATTCTCATGTTTTCGGTGTGTTACCTGTTTC
AGCCGTATTCGAGGCCGAAAAAGTAAAATTTTCCGTAGCATTCTTTCGTT
CGTAAGAAAACGCCCGGCTTGTTGGTAGTGTGCCGTCACATGCGGCGACC
CTCTGGTGCTATTCTCAGGGTACTCAACGGGGTTGCCATCTTAGATGCTA
TATATATTAGCTCCGAGGTGGTGTCTTTTCGTGCGGCTTAATTGAGGGTG
GTGTGATCCACATCGCAGAGCGGTAGCTCACTTTGATCTAAGCGAGCAGT
GCATTTACTAAGCGGTTACAATTCAGTGTATGATGTGACGATGTGGCATA
CTCGACGGGCGGCAGCATTTCGAGTATCGTTTGTTGTTTTATTCTTGACA
ACGTCAGTTTTCCTCTTTGCCTTGGACCTACGTTTGTCAATGCACGGCGA
TCCCGACTGAAAGTGCGTGAAGCCATATCATGTTCGGTGTCTGCTGAACG
TTCTTTTGTAGCACTGGTCATTGGCGTCACGAGTGAGGCGTGATTTCGAC
TTGAACGTTTTTTTTTGAAAGCATGGCGAACGGCATCGGCGCTTACGCGA
AGCGATAGGGTATGTAATTTTGTTTTGATGTGCCGTCTACTGTAGTAGTA
CCATCTTGGCTACACACCCGTACAGTCCGTATTCTCGTTCTCGTGCCCAT
TTAGTCGTAATCCCAAACCCCTGATCCATGCATAAAGGGTCGCTACGCGC
GAATGTAGGCACATACCCACGAAGATTTATTTGTAGAAGTCACTGGAGCA
AGGAATTTGAAATGTTCCGAAATGACCGTCACGTGTAGCGTATTCTATTT
GAGGTATTTCTTCAATCCATATGCGAATTCACTTCATGCACGCGTGGGGA
CTTTCACGTAAAATCTTTAATTCGTGCGCTTTTGCATCACCACCACTTCG
GTCACCCGACCGTGCTTCTTGAACAGTGTGAACGGTTTCTTAGACATACT
GTTTCGATTTCTCAGACAGAGCTGTTCTCTACGCTCAGACGCGGTGCCCT
TTCATTCCACTAACATCGCATCGCTCCCTTCAACGATATGCAACGTGTTT
TCGTTGGCGAACGGCCAATTCCAACCGCCCAAAGTCCCCGCGGACAAGCC
CGGCGAATGTACCAGACCCTCGCAGCTTCTTCGCCAATTTGCTGGCCAGT
GGGAGCAGGACTGTCTCTCCCCCAAAGGTACCCCGGGATAGGATTAGCTT
TGGATTTGCTCGGGGTCTCGTAGCAGTGCCCCCAAAATGGCACGTTTCTA
TTTGCTAGCCCCCTCTTTAGTAGATTGAAGCTGAGAGAGAGCACCGGGTA
ACCTGCCCCAAATTTTACTGTATTTATTCCAGGCTATTATCCATTAGTGC
AATAGTTTAATGTCTGTTGCGTTGGCCGACAGCGGTAGTGGAGGGCAGAT
ATTTGCAGTAGGTTACGATTTTCGGGACAATCGAGTGCGCGTTCTAAGGT
GCAGTGCAGTGCAGCCTTAGCGTCATCTGTTGCAGCGTCGACCTAGCATG
CCCAAAAGTAAGGATTAGTTCGTATTATCTCAGCGCTGCACACCATAGTA
GACTGTGAACCGGTTACACCACACATGTAATTCGGGTGTGCATGGATTAA
TGTAGTCTGTACCAATAGCAAGATATCGTTTGAGCGCCCTCCAGCAAGTT
CTTACGTTTTCTCCAGCTCCCGTCGCTGTTTCACTCCGCGATTTTGGATT
GATCCTTTTGAGCTTCTCCAAACGTCCATCCAGCTGGCATTGCATGTAAT
TTTATTGCCATTCACTGACGTCGAGCTTCTCCGTTCTCTTTTCATCGTGT
CTCCCGCTTCCTGTGTCCACTTTCCTTACCACCACCAGCCTCAGCAGCGG
AAGAAGTAGCACGATTGATGGAGGCGAGGATCGATTTTTTATTTTTTATT
TTTCAGGGAGGGTGAAACGATGTATCGTTGTGGCAAGGGATGGTATACGA
TGTTGATTGGGCAAGTAATGTTGGGCAAGCTGGTGTTCTTGACAGTGGTG
GTTGACGGAAGCAGCTGCCACGACACTGCCGTGGATTTATAAGGGTATTT
CACATGCACAGTGGAATATCCCATCCCTTTGCATCGTATTATGGGGAAGA
GAGGAAGAAGTGGCTCATGGGGAAAACGTGGTGTTGTAGCTGTCAAGTGA
CCTTATACTTGTGCACCCTGCACCTAGCAGCTGGGGGTTGCCGTTTTTTT
CTTGTTTTAAGCCCTTGAAATCGTGGTGTCAAGGGGGCTTCTTTGAACCT
CGAAGATGCCACACGGATAGCGCTCTTGCCACCTGTGTATTTCAGAAATT
CGGTGGAGATAGATGACGGTGGACAAGGACAAGGATGGCACGCGAAGTCG
TTGCCACGATCGGTGGCTGTCCTTCCTGTTTGTGTCGTTGCAATTTTCCA
GAGTGCGAGTTTATCTTTTCGTCGCTGTATAGTATTGTATACTGTGGCAG
TGTCGCGAGCAAACACTCATGGGACCAGTGCAGTCCTTCTTTGGCAGGAA
AGCTCGGATCCTCATCTTGGATAAATCTGTAGTAGAAATTCGAAGGCGTC
ACCAGATGCATAATAATAGCCGACCCCTTTCGTATATTCATGGAAATGAG
GGCAATAGCAGCAGGGCTGACGAATACCCATCCCATTTATTCACCGGACT
AATTCCAAGCCAAGTCTCTTCATGCCAATAACATGACTCCCAATCAATGG
GCAGTGGTACGATTTGTTGAATTATTCAATATATACCGCCCCTCAGTTTG
GTCATTTGCGGATAGTAAGTAATCCAGCGGCTTGAAGATGCTTACCTAAG
ATAATCTACCTCCTTTTCATTTTCACGGTTATTGTTAGTAGAATGACCGG
AGATCAGAGTGAAATTGGTTCGGGAAAGCCATCGAACAATTTGAAAATCC
CCGGCTTGGACTATAGGGTCGTCGCGCTGACGTCCACTTGGAATCAAAGG
ATTTAGTACTGATCATTGTATATGTTTTGGTGATCCGTTCAATTTTTCAA
CTTTTGAAAGTTGATGGTTGATACGTAGATACTAGTATCAGTATATCTGT
GCAATCAACAGGGCCGTCCTGTGTATGAGCAGTCAATTTTGTTGCAGGGG
ATTCTGAACAGTAATGATAAGCGTAGCAAATTCCTCTTGAAAAGATCCTT
CTTCAATAATCGCCAGTTTATGAATTTTTAGGGCACAAGTTTCACTGGGT
TTCACGGTGAGGCGGTGAGGGGGTGCTCTGATGGAACATAGGTATGATAT
TGCTCCATGCGAGGCAGACGGCGTAGGGCAATTTGGAGTGAGTATGCGGC
GAGGGGGGAGGTGCTCTGATGGAACAGAGTATGACATTCCTCCCTCTCTC
ATGCGTAGTATACGTCACGTGGTTTCTCGCGCGAGACACAACGCGTGGAG
CAACTTGGAGTGAGTGTACAAGGCGTAGGTAGGTAACCCTCGGTTGTTTG
TGGGGTGACCAGAATCGAGAGTTTGGCACCCCACCCCTCAAAAACTATGG
TCGTCCCTTGTGGCATATTTTCTGCGCGAGCGAGTCAGCACGCCGCGTTT
GGACCAAACACGACCATTACTACAGACCTAAAGGCTCACAGGGCTCACAG
GACAAACCGCGAAACAGGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig2286:4576..12345-

>mRNA_H-paniculata_contig2286.6103.1 ID=mRNA_H-paniculata_contig2286.6103.1|Name=mRNA_H-paniculata_contig2286.6103.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3594bp|location=Sequence derived from alignment at H-paniculata_contig2286:4576..12345- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGACAGGAGCAATTCGAATGCAGCAGCAGCGACTGCAACCGCCAAA
AACACCTCTAAAGCAAAGACCTCCCACTTCTGCTAATATTCCAGCAGGCA
ATGCATCTGGCAACAGCAATGCCACCGGGCCCAACTTGTGGGAAACCATG
CTGCGAGACGCCATGCGCAGAAACCGTCTCCCTGACGGTACCCTAGTATT
TGTCGGCCCACAGGGCTGTGGTAAGTCCTCCCTACTCGATACCTTCCTGG
AAGGCTCGTTCATGTCGACATCCCTAGCGAACCCGTCGGGTGCAGCAGCC
GCTGCTACCTCCGCCACCGCGGCCGCGACAATGCCACCGGTCGGCGATTC
CGGTCCTGAGGGTGGCGCCGGGGGAGGAGCTAGTGGCGGCGCCAGCGGTA
CAGGTGGCGCGGGGGGAGGCTCTAGCGGCGCGGGCGACGGGCAGCAGCAG
CAGCAGCAGCAACAGCAACAGCAACAGCAGCAGCAAGCAGCGACTGCTCT
CGGTTTTCACCCCGTACTTGCATACTCGTATCTAGATGCAACGGACCCAA
GAGAACAGGGTCCAGAAAGGGACGACTCGCCGCCGAGGGTCAGTGTCTGG
TGCTGCAGCGAGCTAGAGTTTGAGGGTTTGTTGCAGACGGTTTTGCGGCC
GGCCGTGCTTGAACACACGTGCGTTGCCGTTGGCGTGGATTTGTCCAGGC
CGTGGGAACTCATGGAAACCCTTGAGAAGATGGCGACAGGAGCAATTCGA
ATGCAGCAGCAGCGACTGCAACCGCCAAAAACACCTCTAAAGCAAAGACC
TCCCACTTCTGCTAATATTCCAGCAGGCAATGCATCTGGCAACAGCAATG
CCACCGGGCCCAACTTGTGGGAAACCATGCTGCGAGACGCCATGCGCAGA
AACCGTCTCCCTGACGGTACCCTAGTATTTGTCGGCCCACAGGGCTGTGG
TAAGTCCTCCCTACTCGATACCTTCCTGGAAGGCTCGTTCATGTCGACAT
CCCTAGCGAACCCGTCGGGTGCAGCAGCCGCTGCTACCTCCGCCACCGCG
GCCGCGACAATGCCACCGGTCGGCGATTCCGGTCCTGAGGGTGGCGCCGG
GGGAGGAGCTAGTGGCGGCGCCAGCGGTACAGGTGGCGCGGGGGGAGGCT
CTAGCGGCGCGGGCGACGGGCAGCAGCAGCAGCAGCAGCAACAGCAACAG
CAACAGCAGCAGCAAGCAGCGACTGCTCTCGGTTTTCACCCCGTACTTGC
ATACTCGTATCTAGATGCAACGGACCCAAGAGAACAGGGTCCAGAAAGGG
ACGACTCGCCGCCGAGGGTCAGTGTCTGGTGCTGCAGCGAGCTAGAGTTT
GAGGGTTTGTTGCAGACGGTTTTGCGGCCGGCCGTGCTTGAACACACGTG
CGTTGCCGTTGGCGTGGATTTGTCCAGGCCGTGGGAACTCATGGAAACCC
TTGAGAAGTGGTCCGCTGTGTTGGAAAGGCATTTGACGGGGCTCATGAAA
CAACTCTCCTTGGGCGCCCAAGACGACTTGCGTTCAGCGATAAAGGACAG
GCTATCGGCAGGGTACCCGCAGGGCGGCAGCGGTAACACGCCGTCCGGAG
CCGGAAGTAGCGGTAGTGACGAATTGGTCAAGGAGAGTGTTTTGGAGAAG
AACTTGGGCGCTCCGATCGTGGTGGTGGGGTGCAAGGCGGACTCTCTGCA
AAGCGAGACTTTCGAGCAGCAACAGCGGTTGCACTTCATTCAGCAGAGCC
TTCGGCGGTTCTGCCTCAAATTGGTCCGCTGTGTTGGAAAGGCATTTGAC
GGGGCTCATGAAACAACTCTCCTTGGGCGCCCAAGACGACTTGCGTTCAG
CGATAAAGGACAGGCTATCGGCAGGGTACCCGCAGGGCGGCAGCGGTAAC
ACGCCGTCCGGAGCCGGAAGTAGCGGTAGTGACGAATTGGTCAAGGAGAG
TGTTTTGGAGAAGAACTTGGGCGCTCCGATCGTGGTGGTGGGGTGCAAGG
CGGACTCTCTGCAAAGCGAGACTTTCGAGCAGCAACAGCGGTTGCACTTC
ATTCAGCAGAGCCTTCGGCGGTTCTGCCTCAAATACGGGGCGGCGCTGGT
GTACACGTCGGCGAAAGATGGTGTGAACTGCGGGCTGCTTCACCGATACC
TGCTCAGCTGCATCTATCCTGACGCGTTTCCGTGTAACGATGAGGGGCAG
ACGGGGCGGCGCTGGTGTACACGTCGGCGAAAGATGGTGTGAACTGCGGG
CTGCTTCACCGATACCTGCTCAGCTGCATCTATCCTGACGCGTTTCCGTG
TAACGATGAGGGGCAGACAACCGACGTCGCTTTCATTCCGGCGGGATGGG
ACTCGAAACCCCTCATCGACGGCCTCCTGTCACCGGACAAAACACCGTGG
GGTCCGAATGCAGCTTTCGAAGACGTGGTGGTCCCTCCACCGCATGCGTT
GAGGAGTGCAGAAGGAGGTATGGGCGTCAGCGGTAGCGGCGGAGGTCGCG
CAGCCGGCGGTGGAGGTCGAGCGGGAACCGGCGTCAGCGGCACTTCAGCG
ACTGATGAGTCGATTGAGGAGGTGGAGACGGAGGAGTATTGGCTTTCGAG
TCTCGGGAAACAGGTCGCCGGGTCATCTCGCTGGCCGTCAGCCATCGCTA
AGGCTAAGGAAGCAGCGAAGGCGGCGAAGGTGGTTATAATGCACAGTAGC
ATAGTCTCCCCGAGGTTGTGCAGTCGTGGGGACACGATGGTGCAGCGATC
GGTCTCTTACGGGAACGAGAGTGACGGCTACGAAGTTGTATATTCTACGA
AAGGGTTGGTTTCTCGAGAGTACTTGCTCGAGGCTGAAATGTGGTTATTC
TCATGTTTTCGGTGTGTTACCTGTTTCAGCCGTATTCGAGGCCGAAAAAG
TAAAATTTTCCGTAGCATTCTTTCGTTCGTAAGAAAACGCCCGGCTTGTT
GGTAGACAACCGACGTCGCTTTCATTCCGGCGGGATGGGACTCGAAACCC
CTCATCGACGGCCTCCTGTCACCGGACAAAACACCGTGGGGTCCGAATGC
AGCTTTCGAAGACGTGGTGGTCCCTCCACCGCATGCGTTGAGGAGTGCAG
AAGGAGGTATGGGCGTCAGCGGTAGCGGCGGAGGTCGCGCAGCCGGCGGT
GGAGGTCGAGCGGGAACCGGCGTCAGCGGCACTTCAGCGACTGATGAGTC
GATTGAGGAGGTGGAGACGGAGGAGTATTGGCTTTCGAGTCTCGGGAAAC
AGGTCGCCGGGTCATCTCGCTGGCCGTCAGCCATCGCTAAGGCTAAGGAA
GCAGCGAAGGCGGCGAAGGTGGTTATAATGCACAGTAGCATAGTCTCCCC
GAGGTTGTGCAGTCGTGGGGACACGATGGTGCAGCGATCGGTCTCTTACG
GGAACGAGAGTGACGGCTACGAAGTTGTATATTCTACGAAAGGGTTGGTT
TCTCGAGAGTACTTGCTCGAGGCTGAAATGTGGTTATTCTCATGTTTTCG
GTGTGTTACCTGTTTCAGCCGTATTCGAGGCCGAAAAAGTAAAATTTTCC
GTAGCATTCTTTCGTTCGTAAGAAAACGCCCGGCTTGTTGGTAG
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