prot_H-paniculata_contig22853.6102.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22853.6102.1
Unique Nameprot_H-paniculata_contig22853.6102.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length230
Homology
BLAST of mRNA_H-paniculata_contig22853.6102.1 vs. uniprot
Match: A0A6H5JF35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF35_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.180e-18
Identity = 125/291 (42.96%), Postives = 138/291 (47.42%), Query Frame = 0
Query:    4 SQGYGYS----------HQRYEDKHHMHQPTGNRRWGSQEPTPKRPASK---QTGWRGRQXXXXXXXXQP---------------AAQPKASYYAHAQPTPAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVAPQ------TPHNFQHPGYAPPPT-----------------------VPPGGGGAPGYPSMDSLRSKLANALLQTKGTPAPPPYG--YVYPAQ-----PQQPAQAGVYYASQPPTLQQPVAAPAPAPGYPNQHIRFDEQGRPTWGG 230
            SQGYGY           H  YED HHMHQPTG+RRWGSQEPTPKR + +     G +GR     XXXX                    P+  Y     P  A  XXXXXXXXXXXXXXXXXXXXXXXXX              + APQ        H+FQHPGY                             PPG   A G+P+MDSLRSKLANALLQTK      P G  Y YP Q     PQQP        +QP        A A   GYP Q+IR+D +G PTWGG
Sbjct: 1078 SQGYGYQQGGRSXXXXYHGGYEDMHHMHQPTGSRRWGSQEPTPKRNSGRVGRNGGNQGRNHQGRXXXXXXXXXXXXXXXXXXXXXVPXPQGYYGQAVPPLVAAXXXXXXXXXXXXXXXXXXXXXXXXXXPAPVVSAVAPTAYYVTAPQQAPQPVVAHSFQHPGYVQQQPQXXXXXXXXXXXXXXXXXXXXXXXPPG---AAGFPTMDSLRSKLANALLQTKAPTTAAPQGAFYAYPPQQGAPIPQQPHAGAAVPVTQP--------AAAAGTGYPGQNIRYDAKGNPTWGG 1357          
BLAST of mRNA_H-paniculata_contig22853.6102.1 vs. uniprot
Match: D7FVH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH8_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 8.150e-15
Identity = 121/267 (45.32%), Postives = 133/267 (49.81%), Query Frame = 0
Query:   16 DKHHMHQPTGNRRWGSQEPTPKRPASK---QTGWRGRQXXXXXXXXQPAA----QPKASYYAHAQPTP--------------AVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVAPQ------TPHNFQHPGYAPPPT------------------VPPGGGGAPGYPSMDSLRSKLANALLQTKGTPAPPPYG--YVYPAQ-----PQQPAQAGVYYASQPPTLQQPVAAPAPAPGYPNQHIRFDEQGRPTWGG 230
            D HHMHQPTGNRRWGSQEPTPKR + +     G +GR  XXXXXXX        QP   +Y H                   A  XXXXXXXXXXXXXXXXXXXXXXXXX              + APQ        H+FQHPGY                        PPG   A G+P+MDSLRSKLANALLQTK      P G  Y YP Q     PQQP        +QP        A A   GYP Q+IR+DE+G  TWGG
Sbjct:  226 DMHHMHQPTGNRRWGSQEPTPKRNSGRGGRNGGNQGRNHXXXXXXXXXXXXXXHQP---HYQHQXXXXXXXGYXXXXXXXLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPVVSTVAPTAYYVTAPQQAPQPVAAHSFQHPGYVQQQPQLLQXXXXXXXXXXXXXXXPPG---AAGFPTMDSLRSKLANALLQTKAPTTAAPQGAFYAYPPQQGAPIPQQPHAGAAVPVTQP--------AAAAGTGYPGQNIRYDEKGNLTWGG 478          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22853.6102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JF35_9PHAE1.180e-1842.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVH8_ECTSI8.150e-1545.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22853contigH-paniculata_contig22853:372..3911 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22853.6102.1mRNA_H-paniculata_contig22853.6102.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22853 372..3911 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22853.6102.1 ID=prot_H-paniculata_contig22853.6102.1|Name=mRNA_H-paniculata_contig22853.6102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
GHGSQGYGYSHQRYEDKHHMHQPTGNRRWGSQEPTPKRPASKQTGWRGRQ
QQQQQYHHQPAAQPKASYYAHAQPTPAVPAIYAPPPAAPTAYPGYYQAPV
AAPAPAPPGVYYPVAAPVLVAPQTPHNFQHPGYAPPPTVPPGGGGAPGYP
SMDSLRSKLANALLQTKGTPAPPPYGYVYPAQPQQPAQAGVYYASQPPTL
QQPVAAPAPAPGYPNQHIRFDEQGRPTWGG
back to top