prot_H-paniculata_contig2285.6101.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2285.6101.1
Unique Nameprot_H-paniculata_contig2285.6101.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length289
Homology
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BLAST of mRNA_H-paniculata_contig2285.6101.1 vs. uniprot
Match: D8LKZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ0_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 2.810e-110
Identity = 159/245 (64.90%), Postives = 187/245 (76.33%), Query Frame = 0 
Query:   36 PRVHPWCSVEDCTERPLRQFMASSSKQIMFMCKTHFTNVPSQTREGWKQYRGTRTFPETKIAVECRPGPNRGNGVTH---------SEADPGYTNPPEDDK-IRGTTKNSMWPGKLYNVLYQVWNAHAERRKMETGDSHFTSIDRAELVPEAARVLREQGHPDMAVILENTTEGARKVIHSRVIAKYLKHRENFILKLRSSQLDPQEIADWDVALTAAQHHVNLQPIREREREMHPTTSNSSITH 270
            P  +PWCSV  CTERPLRQ+ A+SSKQIMFMCKTHF  VP  TREGWKQYRGTRTFPE++IA  CRPGP RG G            SE DPGYTN P+D+K  RG TK+++WPGK+YNVLYQVWNA AE++K+ +GD + TS DRA LVP+AA VLREQGHP+MA+IL+NTTEGARKVIHSRV+AKYLK+RE F  KLR+  LDP EIA+WD AL AAQHH +L P   RER+   +    S+ H
Sbjct:    2 PECYPWCSVAGCTERPLRQYTAASSKQIMFMCKTHFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGPTRGLGAAXXXXXXXXXXSEVDPGYTNHPDDEKGNRGPTKSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLREQGHPEMAIILDNTTEGARKVIHSRVLAKYLKNREIFSAKLRNIGLDPTEIAEWDAALVAAQHHADLAP---RERDQPHSAVPLSLPH 243
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BLAST of mRNA_H-paniculata_contig2285.6101.1 vs. uniprot
Match: A0A6H5L718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L718_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 4.770e-87
Identity = 135/214 (63.08%), Postives = 162/214 (75.70%), Query Frame = 0 
Query:   64 MFMCKTHFTNVPSQTREGWKQYRGTRTFPETKIAVECRPGPNRGNGVTH------SEADPGYTNPPEDDK-IRGTTKNSMWPGKLYNVLYQVWNAHAERRKMETGDSHFTSIDRAELVPEAARVLREQGHPDMAVILENTTEGARKVIHSRVIAKYLKHRENFILKLRSSQLDPQEIADWDVALTAAQHHVNLQPIREREREMHPTTSNSSITH 270
            MFMCKT F  VP  TREGWKQYRGTRTFPE++IA  CRPGP RG+G         SE DPG+TN P+D+K  RG T +++WPGK+YNVLYQVWNA AE++K+ +GD + TS DRA LVP+AA VLR+QGHP+MA IL+NTTEGARKVI SRV+AKYLK+RE F  KLR+  LDP EIA+WDVAL AAQHH +L P   RER+   +    S+ H
Sbjct:    1 MFMCKTRFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGPTRGHGAAXXXXXXXSEVDPGHTNHPDDEKGNRGPTNSALWPGKVYNVLYQVWNAQAEQKKISSGDGYMTSSDRAALVPQAANVLRDQGHPEMATILDNTTEGARKVIRSRVLAKYLKNREVFSAKLRNIGLDPTEIAEWDVALVAAQHHADLAP---RERDQPHSAVPLSLPH 211
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2285.6101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKZ0_ECTSI2.810e-11064.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L718_9PHAE4.770e-8763.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2285contigH-paniculata_contig2285:10933..18239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2285.6101.1mRNA_H-paniculata_contig2285.6101.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2285 10933..18409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2285.6101.1 ID=prot_H-paniculata_contig2285.6101.1|Name=mRNA_H-paniculata_contig2285.6101.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=289bp
MMALNQLGSPLPGATHYHDIDDVDDDMSDRMSRNCPRVHPWCSVEDCTER
PLRQFMASSSKQIMFMCKTHFTNVPSQTREGWKQYRGTRTFPETKIAVEC
RPGPNRGNGVTHSEADPGYTNPPEDDKIRGTTKNSMWPGKLYNVLYQVWN
AHAERRKMETGDSHFTSIDRAELVPEAARVLREQGHPDMAVILENTTEGA
RKVIHSRVIAKYLKHRENFILKLRSSQLDPQEIADWDVALTAAQHHVNLQ
PIREREREMHPTTSNSSITHPHDDGTGMVSGVGPGGSGT
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