mRNA_H-paniculata_contig22826.6095.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM) HSP 1 Score: 145 bits (367), Expect = 5.500e-40 Identity = 72/145 (49.66%), Postives = 93/145 (64.14%), Query Frame = 1
Query: 1 LEGFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYVAAREAGKETGYLRELLGSIGFGCRGSTKLFEDN*SAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGGQLADILRKGLSRIQFQK 435
L G+VDADWA DV DR+S +GY F L GG ISW S+KQ SSTEAEY+ A A KE +LR L IG C+ +T L DN SA+ ++ H RTKHI +R+H +RE + G + L+YV TG Q+AD+L KGL + + K
Sbjct: 177 LTGYVDADWAGDVNDRRSISGYTFLLAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMKGLVKAKHNK 321
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 151 bits (382), Expect = 9.850e-40 Identity = 74/145 (51.03%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 1 LEGFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYVAAREAGKETGYLRELLGSIGFGCRGSTKLFEDN*SAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGGQLADILRKGLSRIQFQK 435
L G+VDADWA DV DR+S +GY F L GG +SW S+KQ SSTEAEY+AA A KE +LR LG IG C+ +T L DN SA+ +++ H RTKHI VR+H +RE + G + L+YV TG Q+AD+L KGL + + K
Sbjct: 983 LTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Match: A0A4Z0A7X3_9AGAM (Uncharacterized protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A7X3_9AGAM) HSP 1 Score: 140 bits (352), Expect = 8.570e-39 Identity = 71/145 (48.97%), Postives = 92/145 (63.45%), Query Frame = 1
Query: 1 LEGFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYVAAREAGKETGYLRELLGSIGFGCRGSTKLFEDN*SAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGGQLADILRKGLSRIQFQK 435
L G+VDADWA DV DR S +GY F L GG ISW S+KQ + SSTEAEY+AA A KE +L L IG C+ +T L DN SA+ ++ H +TKHI VR+H +RE + G + L+YV G Q+AD+L KGL + + K
Sbjct: 79 LTGYVDADWAGDVNDRHSISGYTFLLAGGAISWSSKKQNMTALSSTEAEYIAAAHAAKEATWLCTFLSEIGRPCKAATLLLMDNQSAMAIAWNPVFHVQTKHIDVRYHFLREKVEAGAINLQYVPMGDQVADVLTKGLVKAKHDK 223
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Match: UPI00193C8901 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193C8901) HSP 1 Score: 138 bits (348), Expect = 2.550e-38 Identity = 72/144 (50.00%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 1 LEGFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYVAAREAGKETGYLRELLGSIGFGCRGSTKLFEDN*SAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGGQLADILRKGLSRIQFQ 432
+EG+VDAD+AED+E R+STTGYVF L G ++W +++Q++VT S+TEAEYVAA A KE +LR LL + C +TK+F DN S + L + S H RTKHI VR H IRE + G + K V T Q AD+ K L R +F+
Sbjct: 59 IEGYVDADFAEDLETRRSTTGYVFLLGNGAVTWTAQRQKMVTISTTEAEYVAAAAAAKEAIWLRRLLSGLERNCNRATKVFIDNQSTLRLVQNSEFHKRTKHIDVRCHFIREKVLSGKIDTKCVNTTKQKADLFTKALPRDRFK 202
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY) HSP 1 Score: 139 bits (350), Expect = 2.830e-38 Identity = 73/145 (50.34%), Postives = 97/145 (66.90%), Query Frame = 1
Query: 1 LEGFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYVAAREAGKETGYLRELLGSIGFGCRGSTKLFEDN*SAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGGQLADILRKGLSRIQFQK 435
+ GF D+D+A DV+ RKSTTGYVF + G I+WCSR+Q+ + S+TEAEYVAA EA KE +LR LL I + +L+ DN SAI L K H RTKHI VR+H I+E + G + ++YV++ QLADIL K L ++F K
Sbjct: 101 VHGFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPLVSVKFNK 245
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Match: UPI000D3F8D86 (Ty1/Copia family ribonuclease HI n=1 Tax=Acinetobacter nosocomialis TaxID=106654 RepID=UPI000D3F8D86) HSP 1 Score: 136 bits (343), Expect = 9.300e-38 Identity = 67/144 (46.53%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 1 LEGFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYVAAREAGKETGYLRELLGSIG-FGCRGSTKLFEDN*SAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGGQLADILRKGLSRIQF 429
L+G+ DADWA D+E R+ST+GY F +NGG ISW S+KQ V SSTEAEY+A EA +E +L+ L IG + + K++EDN +I L+K H RTKHI +R+H +RE + +G + L+Y T LAD++ K ++ +QF
Sbjct: 29 LQGYSDADWAGDIETRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALTEATQEAIWLKAFLCEIGEMETKSAVKIYEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCSTKDMLADLMTKPITAVQF 172
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE) HSP 1 Score: 138 bits (348), Expect = 1.320e-37 Identity = 69/143 (48.25%), Postives = 95/143 (66.43%), Query Frame = 1
Query: 7 GFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYVAAREAGKETGYLRELLGSIG-FGCRGSTKLFEDN*SAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGGQLADILRKGLSRIQFQ 432
G+ DADWA D+E R+ST+GYVF +NGG ISW S+KQ V SSTEAEY+A EA KE +L+ LG +G + K+FEDN +I L+K H RTKHI +R+H +RE + G + L+Y T LAD++ K ++ +QF+
Sbjct: 104 GYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADMMTKPIAAVQFE 246
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Match: UPI001EE6E994 (secreted RxLR effector protein 161-like n=1 Tax=Neodiprion lecontei TaxID=441921 RepID=UPI001EE6E994) HSP 1 Score: 137 bits (345), Expect = 1.640e-37 Identity = 73/143 (51.05%), Postives = 95/143 (66.43%), Query Frame = 1
Query: 1 LEGFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYVAAREAGKETGYLRELLGSIGFGCRGSTKLFEDN*SAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGGQLADILRKGLSRIQF 429
L + DAD+AED E R+STTGYVF+L GG I+W S++Q+LVT S+TEAEYV A +E +LR+LL I + C +T +F DN SAI L + H RTKHI +R+H IRE + E IL ++YVQT Q DI K R +F
Sbjct: 96 LVDYSDADYAEDAETRRSTTGYVFQLAGGPITWASQRQKLVTLSTTEAEYVVASVTSREAIWLRKLLLDIEYPCADATVIFVDNQSAIRLVRNPEFHKRTKHIDIRYHYIREKVVEKILKIEYVQTKQQKGDIFTKAQPRERF 238
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF) HSP 1 Score: 139 bits (351), Expect = 1.710e-37 Identity = 72/145 (49.66%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 1 LEGFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYVAAREAGKETGYLRELLGSIGFGCRGSTKLFEDN*SAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGGQLADILRKGLSRIQFQK 435
L G+VD+D+A D +DRKST+G+ F GG +SW S+KQ +VT S+TEAEYVAA + ++R +L IGFG T LF DN SAI LSK H R+KHI VR+H +RE + EGI++ +Y T QLADI+ K + F+K
Sbjct: 188 LVGYVDSDYAGDEDDRKSTSGFTFMFGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTKPVKLEVFEK 332
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Match: H3G5T8_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5T8_PHYRM) HSP 1 Score: 134 bits (338), Expect = 2.260e-37 Identity = 67/144 (46.53%), Postives = 94/144 (65.28%), Query Frame = 1
Query: 1 LEGFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYVAAREAGKETGYLRELLGSIG-FGCRGSTKLFEDN*SAINLSKGSGAHCRTKHIGVRWHGIREWIREGILALKYVQTGGQLADILRKGLSRIQF 429
L+G+ DADWA D+E R+ST+GY F +NGG ISW S+KQ V SSTEAEY+A EA +E +L+ L +G + K++EDN +I L+K H RTKHI +R+H +RE + +G + L+YV T LAD++ K + QF
Sbjct: 25 LQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAIPATQF 168 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22826.6095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22826.6095.1 >prot_H-paniculata_contig22826.6095.1 ID=prot_H-paniculata_contig22826.6095.1|Name=mRNA_H-paniculata_contig22826.6095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp LEGFVDADWAEDVEDRKSTTGYVFKLNGGTISWCSRKQELVTWSSTEAEYback to top mRNA from alignment at H-paniculata_contig22826:2450..2884- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22826.6095.1 ID=mRNA_H-paniculata_contig22826.6095.1|Name=mRNA_H-paniculata_contig22826.6095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=435bp|location=Sequence derived from alignment at H-paniculata_contig22826:2450..2884- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22826:2450..2884- >mRNA_H-paniculata_contig22826.6095.1 ID=mRNA_H-paniculata_contig22826.6095.1|Name=mRNA_H-paniculata_contig22826.6095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=510bp|location=Sequence derived from alignment at H-paniculata_contig22826:2450..2884- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |