prot_H-paniculata_contig228.6082.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig228.6082.1
Unique Nameprot_H-paniculata_contig228.6082.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
BLAST of mRNA_H-paniculata_contig228.6082.1 vs. uniprot
Match: A0A6H5JSK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK8_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 5.610e-24
Identity = 41/81 (50.62%), Postives = 62/81 (76.54%), Query Frame = 0
Query:    6 VAMREKKQECRVNQCNHLLPLEAQNCINECISPVCYRKTYAEPLEDGEINADLANSFTNCARRELRMANSVKKASGRKAVT 86
            +++ ++K+EC    C HL+PLEA+NC++EC+SP CYRKTYAEPLEDGEIN  L+ +F  CA+R+++ +   K+ S R+A +
Sbjct:   32 ISVYDRKRECETETCGHLVPLEAKNCVHECVSPDCYRKTYAEPLEDGEINLQLSKNFMACAQRDIKNSMVAKRRSDRQAAS 112          
BLAST of mRNA_H-paniculata_contig228.6082.1 vs. uniprot
Match: A0A482RSH6_9ARCH (DUF4787 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSH6_9ARCH)

HSP 1 Score: 70.5 bits (171), Expect = 3.500e-13
Identity = 33/72 (45.83%), Postives = 45/72 (62.50%), Query Frame = 0
Query:    2 PQVNVAMREKKQECRVNQCNHLLPLEAQNCINECISPVCYRKTYAE-PLEDGEINADLANSFTNCARRELRM 72
            P  + A R KK +C    C+HL+P EA NC+N+C S  CY + Y E PLEDGEI+     +F +C R E+R+
Sbjct:   21 PNKDKAWRLKKVKCEKEDCSHLVPEEAYNCVNKCTSEKCYNEVYKESPLEDGEIDNARNRAFLSCLREEVRL 92          
BLAST of mRNA_H-paniculata_contig228.6082.1 vs. uniprot
Match: A0A7S1VMC4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VMC4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.180e-9
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 0
Query:   15 CRVNQCNHLLPLEAQNCINECISPVCYRKTYAE-PLEDGEINADLANSFTNCARRE 69
            C    C H++P EA NCIN+C+S  C+ + YA  PLEDGEI+   A  F  CA+ E
Sbjct:   46 CEREDCAHIIPEEAMNCINKCVSEQCFTEIYAAIPLEDGEIDLRRAREFDKCAKYE 101          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig228.6082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JSK8_9PHAE5.610e-2450.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A482RSH6_9ARCH3.500e-1345.83DUF4787 domain-containing protein n=1 Tax=archaeon... [more]
A0A7S1VMC4_9STRA1.180e-948.21Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031985Protein of unknown function DUF4787PFAMPF16029DUF4787coord: 7..65
e-value: 2.3E-15
score: 56.4
IPR031985Protein of unknown function DUF4787PANTHERPTHR35455FAMILY NOT NAMEDcoord: 2..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig228contigH-paniculata_contig228:29231..33295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig228.6082.1mRNA_H-paniculata_contig228.6082.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig228 28422..35077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig228.6082.1 ID=prot_H-paniculata_contig228.6082.1|Name=mRNA_H-paniculata_contig228.6082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
MPQVNVAMREKKQECRVNQCNHLLPLEAQNCINECISPVCYRKTYAEPLE
DGEINADLANSFTNCARRELRMANSVKKASGRKAVTSNKPVDAAVFVESN
GESQPTFGVSLSEGSAREGTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031985DUF4787