prot_H-paniculata_contig228.6079.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig228.6079.1
Unique Nameprot_H-paniculata_contig228.6079.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length276
Homology
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BLAST of mRNA_H-paniculata_contig228.6079.1 vs. uniprot
Match: A0A6H5JVX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX6_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 9.280e-81
Identity = 141/223 (63.23%), Postives = 169/223 (75.78%), Query Frame = 0 
Query:   57 DIRPVAAPVGEPSLEIPDVSEADVGKMVLSETRAGILTGVVESF-AERNGLGVWLIKYENGKVAEMDDCGELHDDMCAYFEFAGNAAAAVGKQVRTRGKS-CVQEQVRARLFA--DARDVVGRCVCKVVDKTLREGKVTNYIQPTRDGEIDRWRVAYD---DGETLNLESFELVKPLLRYVERRIEQREVPWGFRVLSAYIHRTGDGIARPFATLAGISASMP 272
            +IRPVAA V EP L++P+VSEADVGK+VLSET AG LTGVVE+F    +GLG W I+YENG +A +DDCGELHDDMC+YFEFAGNAAA+  K VRTR  S   QE+VR  LF   D   VVGR V    +K L EG VT Y+QPTRDGEID+WRVA+D   + E ++++SFEL++PLL +VERRIEQREV WG R +  Y+HRTGD  +RPF TL GI ASMP
Sbjct:  466 EIRPVAAAVPEPLLQVPEVSEADVGKLVLSETGAGTLTGVVEAFEGTEDGLGAWTIRYENGDLARLDDCGELHDDMCSYFEFAGNAAASAAKHVRTRHLSPLAQEEVRVSLFKGQDTGSVVGRKVSVFREKILHEGWVTKYVQPTRDGEIDQWRVAFDAACESEPMDMDSFELLRPLLLHVERRIEQREVQWGHRKVVVYMHRTGDS-SRPFTTLPGICASMP 687
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BLAST of mRNA_H-paniculata_contig228.6079.1 vs. uniprot
Match: D7FPX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPX4_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 7.380e-79
Identity = 141/223 (63.23%), Postives = 168/223 (75.34%), Query Frame = 0 
Query:   57 DIRPVAAPVGEPSLEIPDVSEADVGKMVLSETRAGILTGVVESFAER-NGLGVWLIKYENGKVAEMDDCGELHDDMCAYFEFAGNAAAAVGKQVRTRG-KSCVQEQVRARLFADAR--DVVGRCVCKVVDKTLREGKVTNYIQPTRDGEIDRWRVAYD---DGETLNLESFELVKPLLRYVERRIEQREVPWGFRVLSAYIHRTGDGIARPFATLAGISASMP 272
            +IRPVAA V EP L++P+VSEADVGK+VLSET AG LTGVVE+F E  +GLG W I+YENG VA +DDCGELHDDMC+YFEFAGNAAAA  K VRTR      QE+VR  LF       VVGR V    +K L EG VT Y+QPTRDGEID+WRVA+D   + + ++++SFEL++PLL +VERRIEQREV WG R +  Y+HRTGD  +RPF TL GI ASMP
Sbjct:  482 EIRPVAAAVPEPLLQVPEVSEADVGKLVLSETGAGTLTGVVEAFEETGDGLGAWTIRYENGDVARLDDCGELHDDMCSYFEFAGNAAAAAAKHVRTRHLPPRAQEEVRLGLFKGKGMDSVVGRRVSVFREKILYEGWVTKYVQPTRDGEIDQWRVAFDAACESQPMDMDSFELLRPLLLHVERRIEQREVQWGHRKVVIYMHRTGDS-SRPFTTLPGICASMP 703
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig228.6079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVX6_9PHAE9.280e-8163.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPX4_ECTSI7.380e-7963.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig228contigH-paniculata_contig228:6709..10697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig228.6079.1mRNA_H-paniculata_contig228.6079.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig228 5139..12576 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig228.6079.1 ID=prot_H-paniculata_contig228.6079.1|Name=mRNA_H-paniculata_contig228.6079.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=276bp
MIDALCPSAAVAGTNISPLVSERKKQESKWPTSASKRAVDGGGGRSRKRP
KASGEVDIRPVAAPVGEPSLEIPDVSEADVGKMVLSETRAGILTGVVESF
AERNGLGVWLIKYENGKVAEMDDCGELHDDMCAYFEFAGNAAAAVGKQVR
TRGKSCVQEQVRARLFADARDVVGRCVCKVVDKTLREGKVTNYIQPTRDG
EIDRWRVAYDDGETLNLESFELVKPLLRYVERRIEQREVPWGFRVLSAYI
HRTGDGIARPFATLAGISASMPPAA*
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