mRNA_H-paniculata_contig22796.6076.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22796.6076.1
Unique NamemRNA_H-paniculata_contig22796.6076.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Match: A0A6H5L269_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L269_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 8.420e-74
Identity = 136/287 (47.39%), Postives = 185/287 (64.46%), Query Frame = 2
Query:   35 PHVVSPDLKKINALLKMPMPSNRGELRSLLGSILYLRKFLPDLSKELRELNHVFCHDVPFIFSDRHARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPLQPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLDVFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVSATDDDENVCRILDSHEVTVCFIGRSGITLTSLRSGSGMQPLQQPLPTRIYIPFLLRPWVMYCVNKE 895
            P  + PD KK +A+ KM MP  + ELRS+LGS+ YLRKFLP+L++ + +L  +   DV F F+  H ++ K +L  LA+  VL FP ++AA+DGT  F+LTT+A   G G+VLE  Q D T+RPL+YISR+   N+ NW+ + LEC AL+W I+KLRV+LYGI  + FTD+Q LLS+ISM EKKP+VQRMCD LS + F L Y+ GK NQ+ADALSRLP   T  D + C++++  ++ V F+G        L S S    +  P   R      LRP V  C  +E
Sbjct:  279 PFGLHPDPKKTDAMAKMKMPKTKSELRSMLGSVSYLRKFLPNLARNITDLTALLKKDVHFKFTAHHEQLTKAVLAQLASYEVLAFPDYDAAIDGTRKFRLTTDASISGFGAVLEQPQEDGTVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQRMCDFLSAYSFTLSYRKGKENQVADALSRLPQPPTAADFDKCKLIEDGDLEVYFLGSRRRATRKLGSDSNAF-ISDPTENRF-----LRP-VTLCTTEE 558          
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Match: A0A6H5KJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH5_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 1.060e-70
Identity = 125/257 (48.64%), Postives = 171/257 (66.54%), Query Frame = 2
Query:   35 PHVVSPDLKKINALLKMPMPSNRGELRSLLGSILYLRKFLPDLSKELRELNHVFCHDVPFIFSDRHARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPLQPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLDVFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVSATDDDENVCRILDSHEVTVCFIGRSGITLTSLRSGS 805
            P  + PD KK +A+ KM MP  + ELRS+LGS+ YLRKF P+L++ + +L  +      F F+  H ++ K +L  L +  VL FP + AA+DGT  F+LTT+A   G G+VLE  + D T+RPL+YISR+   N+ NW+ + LEC AL+W I+KLRV+LYGI  + FTD+Q LLS+ISM EKKP+VQ MCD L+ + F L Y+ GK NQ+ADALSRLP   T DD + C+ ++  ++ VCFIG S      L S S
Sbjct:  130 PFGLHPDPKKTDAMAKMKMPKTKSELRSMLGSVSYLRKFRPNLARNITDLTALLQKAAHFKFTAHHEQLTKAVLAQLTSYEVLAFPDYAAAIDGTRKFRLTTDASISGSGAVLEQPRDDGTVRPLVYISRSTLPNEANWDVSSLECGALVWAIRKLRVYLYGIPFEAFTDHQPLLSFISMGEKKPRVQHMCDFLTAYSFTLSYRKGKDNQVADALSRLPQPPTADDFDKCKSIEDGDLEVCFIGSSRRATRKLGSDS 386          
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Match: A0A6H5KFR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR4_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 3.900e-65
Identity = 125/326 (38.34%), Postives = 183/326 (56.13%), Query Frame = 2
Query:   89 MPSNRGELRSLLGSILYLRKFLPDLSKELRELNHVFCHDVPFIFSDRHARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPLQPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLDVFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVSATDDDENVCRILD--SHEVTVCFI---------GRSGITLTSL--RSGSGMQPLQQPLPTRIYIPFLLRPWVMY-CVNKEGFHLGVHATLASLERYYWWIEMSASVKWRVRNYSICQAAKTSR 1024
            MP +  +LRSL+G +   RKFLP+++K +R L  +      FIF+    +  +++L  LANP VLV+P  +   DG+ PF L  +A + G G  LE  QPD ++RP ++ISR   N++ +W   DLE  +++W IK+LR +L+G K  + TD++SL  +  + E   +VQR  + L+ + + L Y+ G  N  AD L+RLPV+A + + +    L     E  V FI          R+  T +S+  R G     L    P RIY+P L+RPW+M  C      HLG   TL+ LER+YWWI MS   KW VR+   CQA K+SR
Sbjct:    1 MPRDVNQLRSLVGGLSSYRKFLPNMAKRIRPLTTLLTKQEKFIFTPSMEQAVRVLLAELANPPVLVYPDWDVVSDGSRPFHLYCDASRDGFGGTLEQEQPDGSIRPCVFISRATLNSECHWTPLDLEAGSIVWCIKRLRGYLWGTKFRICTDHKSLKHFAKVGENNARVQRWLEFLTAYNYTLEYRKGSANGNADFLARLPVAAAECNRSGRSRLTPAEDEEAVFFIRSCGRTPSGDRAAATPSSMTTRPGGRAARLLNDEPIRIYVPILMRPWMMQVCHADASCHLGAARTLSMLERFYWWIGMSVCTKWWVRHCLRCQARKSSR 326          
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Match: A0A6H5K8H1_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H1_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.060e-59
Identity = 104/211 (49.29%), Postives = 143/211 (67.77%), Query Frame = 2
Query:   35 PHVVSPDLKKINALLKMPMPSNRGELRSLLGSILYLRKFLPDLSKELRELNHVFCHDVPFIFSDRHARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPLQPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLDVFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQL 667
            P  V PD KK +A+ KM MP  + ELRS+LGS+ YLRKFLP+L++ + +L  +   D  F F+  H ++ K +L  LA+  VL FP + AA+DGT  F+LTT+A   G G+VLE  Q D T+ PL+Y+SR+   N+ NW+ + LEC AL+W I+KLR  LYGI  + FTD++ LLS+ SM EKKP+VQRM D LS + F L Y+ GK N++
Sbjct:  251 PFSVRPDPKKTDAMAKMKMPKTKSELRSMLGSVSYLRKFLPNLARNITDLTALLEKDAHFKFTAHHEQLTKAVLAQLASYEVLAFPDYAAAIDGTRKFRLTTDASISGFGAVLEQPQEDGTVSPLVYVSRSTLPNEANWDVSSLECGALVWAIRKLRDCLYGIPFEAFTDHKPLLSFFSMGEKKPRVQRMGDFLSAYSFTLSYRKGKDNRM 461          
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Match: A0A6H5KAD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD8_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 2.080e-57
Identity = 118/342 (34.50%), Postives = 176/342 (51.46%), Query Frame = 2
Query:  137 YLRKFLPDLSKELRELNHVFCHDVPFIFSDRHARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPLQPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLDVFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVSATDDDENVCRIL--DSHEVTVCFIGRSGIT-------------------------------------------LTSLRSGSGMQPLQQPLPTRIYIPFLLRPWVMY-CVNKEGFHLGVHATLASLERYYWWIEMSASVKWRVRNYSICQAAKTSR 1024
            Y RKFLP+++  +R L  +      F+F+    +  ++ L+ LANP VLV+P  +A  DG+ PF+L  +A + G G  LE  QPD ++RP+++ISR   +++++W   DLE  +++W+IK+LR +L+G K  +FTD++SL  +  +     +VQR  + L+ + + L Y+ G  N  AD LSRLP+ A + D +    L  D  E  V FI   G+T                                            T+ R G     L    P RIY+P L+RPW+M  C      HLG   TL+ LER+YWW+ MS   KW VR+   CQA K+SR
Sbjct:   44 YYRKFLPNMATRIRPLTTLLKKQATFVFAPAMVQAVRVPLSELANPPVLVYPDLDAVSDGSRPFRLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATLDSERHWTPLDLEAGSIVWSIKRLRGYLWGTKFRIFTDHKSLEHFAKVGGNNARVQRWLEFLTAYNYTLEYRKGSANGNADFLSRLPIDAAECDRSGRSRLTPDDDEEGVFFIRSCGLTPSGHRAVGVGLGGLVPTSPTSVLGGLAPSTDDFIDFRRHAPPSSTTARPGGRAARLLNDEPIRIYVPMLMRPWIMQACHADASCHLGAARTLSMLERFYWWVGMSVCTKWWVRHCLRCQARKSSR 385          
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Match: A0A6H5JJN6_9PHAE (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN6_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 3.060e-57
Identity = 100/246 (40.65%), Postives = 156/246 (63.41%), Query Frame = 2
Query:   44 VSPDLKKINALLKMPMPSNRGELRSLLGSILYLRKFLPDLSKELRELNHVFCHDVPFIFSDRHARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPLQPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLDVFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVSATDDDENV-CRILDSHEVTVCFIGRSGI 778
            + PD +K+  L ++PMP+N  +LRSLLGS+ Y RKFL ++S +L+ +N +      F F+  H  + + +++ L+ PTVL FP +  A+ G  PF+LT +A   GLG+V+E  Q D ++RPL ++SR+   N+  W+ T+LE  A++W IKK R   YGI  +V++D+Q L +  S+ EK  +VQR  D LS + + L+Y+PG+ N  AD +SRLP+ AT +DE    R+ D  ++ V  I  SG+
Sbjct:   32 IGPDPEKVRPLREVPMPTNVSQLRSLLGSLSYYRKFLKNMSAKLKPINAMLKKGEKFAFTADHVAVVRKMMDILSGPTVLAFPCYEGAISGERPFRLTADASISGLGAVIEQEQRDGSIRPLCFLSRSTFPNETRWSPTELEAGAIVWAIKKNRTLFYGIPFEVYSDHQPLRNLGSLAEKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDPSDLDVYMINASGV 277          
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Match: A0A6H5KAM4_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM4_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 5.790e-57
Identity = 101/246 (41.06%), Postives = 157/246 (63.82%), Query Frame = 2
Query:   44 VSPDLKKINALLKMPMPSNRGELRSLLGSILYLRKFLPDLSKELRELNHVFCHDVPFIFSDRHARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPLQPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLDVFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVSATDDDENV-CRILDSHEVTVCFIGRSGI 778
            + PD +K+  L ++PMP+N  +LRSLLGS+ Y RKFL ++S +L+ +N +      F F+  H  + + +++ L+ PTVL FP +  A+ G  PF+LT +A   GLG+V+E  Q D ++RPL ++SR+   N+  W+ T+LE  A++W IKK R   YGI  +V++D+Q L +  S+ EK  +VQR  D LS + + L+Y+PG+ N  AD +SRLP+ AT +DE    R+ D  ++ V  IG SG+
Sbjct:   32 IGPDPEKVRPLREVPMPTNVSQLRSLLGSLSYYRKFLKNMSAKLKPINAMLKKGEKFAFTADHVAVVRKMMDILSGPTVLAFPCYEGAISGERPFRLTADASISGLGAVIEQEQRDGSIRPLCFLSRSTFPNETRWSPTELEAGAIVWAIKKNRTLFYGIPFEVYSDHQPLRNLGSLAEKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDPSDLDVYMIGASGV 277          
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 4.000e-55
Identity = 100/246 (40.65%), Postives = 154/246 (62.60%), Query Frame = 2
Query:   44 VSPDLKKINALLKMPMPSNRGELRSLLGSILYLRKFLPDLSKELRELNHVFCHDVPFIFSDRHARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPLQPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLDVFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVSATDDDENV-CRILDSHEVTVCFIGRSGI 778
            + P  KK+  +L+MPMP+N  +LRS+LGS+ Y RKFL  +S +L  +  +   D  F F+ +HA + + + + L++P VL FP +  A+ G   F+L T+A   GLG+V+E  Q D T+RPL Y+SR+   N++ W+ T+LEC A++W IKK R   YGI   +++D+Q L +  S+ EK  +VQR  D LS + + L Y+PGK N  AD +SRLP+   ++D +   R+ D  ++ V  IG SG+
Sbjct:  187 IEPCPKKVKPMLQMPMPTNVSQLRSILGSLSYYRKFLKGMSAKLHSVTALLKKDAKFAFTAKHAEVIQEMKDKLSSPEVLAFPDYEGAITGKRKFRLITDASISGLGAVIEQEQEDGTVRPLCYLSRSTYPNERRWSATELECGAIVWAIKKNRTLFYGIPFQIYSDHQPLRNLESLAEKNNRVQRWFDFLSAYTYELIYRPGKANGNADCMSRLPLPPMEEDASPEMRLTDPSDLDVYMIGASGV 432          
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Match: A0A6H5JWR4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR4_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.530e-53
Identity = 100/246 (40.65%), Postives = 155/246 (63.01%), Query Frame = 2
Query:   44 VSPDLKKINALLKMPMPSNRGELRSLLGSILYLRKFLPDLSKELRELNHVFCHDVPFIFSDRHARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPLQPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLDVFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVSATDDDENV-CRILDSHEVTVCFIGRSGI 778
            + PD  K+  L ++PMP+N  +LRSLLGS+ Y RKFL ++S +L+ +N +      F F+  H  + + +++ L+ PTVL FP +  A+ G  PF+LT +A   GLG+V+E  Q D ++RPL ++SR+   N+  W+ T LE  A++W IK+ R   YGI  +V++D+Q L +  S+ EK  +VQR  D LS + + L+Y+PG+ N  AD +SRLP+ AT +DE    R+ D  ++ V  IG SG+
Sbjct:   32 IGPDPGKVRPLREVPMPTNVSQLRSLLGSLSYYRKFLKNMSAKLKPINAMLKKGEKFAFTADHVAVVRKMMDILSGPTVLAFPCYEGAISGERPFRLTADASISGLGAVIEQEQRDGSIRPLCFLSRSTFPNETRWSPTKLEAGAIVWAIKQNRTLFYGIPFEVYSDHQPLRNLGSLAEKNNRVQRWYDFLSAYTYELKYRPGRENANADLMSRLPLPATKEDEAPDVRLTDPSDLDVYMIGASGV 277          
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 8.860e-51
Identity = 105/273 (38.46%), Postives = 163/273 (59.71%), Query Frame = 2
Query:   35 PHVVSPDLKKINALLKMPMPSNRGELRSLLGSILYLRKFLPDLSKELRELNHVFCHDVPFIFSDRHARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPLQPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLDVFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALSRLPVSATDDDENVCRIL--DSHEVTVCFIGRSGITLTSLRS-GSGMQPLQQPLPTRI 844
            P  V P+  K+ AL KMPMP +  +LRSLLG + Y RKFLP+++  +R L  +      F+F+    +  +I+L+ LANP VLV+P  +A  DG+ PF+L  +A + G G  LE  QPD ++RP+++ISR   +++++W   DLE  +++W+IK+LR +L+G K  +FTD++SL  +  + E   +VQR  + L+ + + L Y+ G  N  AD LSRLP+ A + D +    L  D  E  V FI   G+T +  R+ G G+  L    PT +
Sbjct:  475 PDGVRPNGAKVAALTKMPMPRDVKQLRSLLGGLSYYRKFLPNMATRIRPLTTLLKKQATFVFTLAMEQAVRILLSELANPPVLVYPDWDAVSDGSRPFRLYCDASRDGFGGTLEQEQPDGSIRPIVFISRATLDSERHWTPLDLEAGSIVWSIKRLRGYLWGTKFRIFTDHKSLEHFAKVGENNARVQRWLEFLTAYNYTLEYRKGSANGNADFLSRLPIDAAECDRSGRSRLTPDGDEEGVSFIRSCGLTPSVHRAVGVGLGGLVPTSPTSV 747          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22796.6076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L269_9PHAE8.420e-7447.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH5_9PHAE1.060e-7048.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFR4_9PHAE3.900e-6538.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8H1_9PHAE1.060e-5949.29RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KAD8_9PHAE2.080e-5734.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JJN6_9PHAE3.060e-5740.65RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6H5KAM4_9PHAE5.790e-5741.06RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KRW3_9PHAE4.000e-5540.65Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JWR4_9PHAE1.530e-5340.65Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JUZ4_9PHAE8.860e-5138.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22796contigH-paniculata_contig22796:2468..4112 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score129.8
Seed ortholog evalue2.3e-27
Seed eggNOG ortholog400682.PAC_15717966
Hectar predicted targeting categoryother localisation
EggNOG free text desc.K02A2.6-like
EggNOG OGs38F42@33154,3BA5H@33208,COG2801@1,KOG0017@2759
COG Functional cat.OU
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons2
Model size1048
Cds size966
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22796.6076.1prot_H-paniculata_contig22796.6076.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22796 2468..4030 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929634.4032753-CDS-H-paniculata_contig22796:2467..26831622929634.4032753-CDS-H-paniculata_contig22796:2467..2683Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22796 2468..2683 -
1691480944.8385038-CDS-H-paniculata_contig22796:2467..26831691480944.8385038-CDS-H-paniculata_contig22796:2467..2683Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22796 2468..2683 -
1622929634.5130744-CDS-H-paniculata_contig22796:3280..40301622929634.5130744-CDS-H-paniculata_contig22796:3280..4030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22796 3281..4030 -
1691480944.8535428-CDS-H-paniculata_contig22796:3280..40301691480944.8535428-CDS-H-paniculata_contig22796:3280..4030Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22796 3281..4030 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929634.5279448-UTR-H-paniculata_contig22796:4030..41121622929634.5279448-UTR-H-paniculata_contig22796:4030..4112Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22796 4031..4112 -
1691480944.8650053-UTR-H-paniculata_contig22796:4030..41121691480944.8650053-UTR-H-paniculata_contig22796:4030..4112Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22796 4031..4112 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22796.6076.1

>prot_H-paniculata_contig22796.6076.1 ID=prot_H-paniculata_contig22796.6076.1|Name=mRNA_H-paniculata_contig22796.6076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=322bp
MPMPSNRGELRSLLGSILYLRKFLPDLSKELRELNHVFCHDVPFIFSDRH
ARIAKIILNYLANPTVLVFPGHNAAVDGTPPFQLTTNACKHGLGSVLEPL
QPDNTLRPLLYISRTIDNNDKNWNTTDLECAALLWTIKKLRVFLYGIKLD
VFTDYQSLLSYISMLEKKPKVQRMCDILSQFQFNLRYKPGKRNQLADALS
RLPVSATDDDENVCRILDSHEVTVCFIGRSGITLTSLRSGSGMQPLQQPL
PTRIYIPFLLRPWVMYCVNKEGFHLGVHATLASLERYYWWIEMSASVKWR
VRNYSICQAAKTSRRRAPLAPH
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mRNA from alignment at H-paniculata_contig22796:2468..4112-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22796.6076.1 ID=mRNA_H-paniculata_contig22796.6076.1|Name=mRNA_H-paniculata_contig22796.6076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1645bp|location=Sequence derived from alignment at H-paniculata_contig22796:2468..4112- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCAGAAGTAACATTTTTGGGACATTTGATCACACCCGCACGTTGTTTCTC CGGATCTCAAAAAGATCAACGCGTTACTAAAGATGCCGATGCCCTCCAAC CGCGGAGAGTTGCGTTCACTTCTCGGCAGCATTTTATATCTACGCAAGTT CTTGCCGGATCTTTCAAAGGAACTCAGGGAACTCAACCACGTTTTTTGTC ACGACGTGCCGTTTATATTTTCGGATCGGCATGCACGAATCGCCAAGATA ATTCTGAATTATCTTGCTAACCCAACCGTACTCGTATTTCCAGGTCACAA CGCTGCAGTGGACGGGACACCCCCTTTCCAACTCACAACCAATGCTTGCA AACACGGTCTAGGCTCCGTTCTCGAACCGCTGCAACCCGATAACACTCTT CGCCCTTTGTTATATATCAGTCGCACTATTGATAACAACGACAAGAACTG GAATACTACGGACTTGGAATGCGCTGCATTGTTATGGACGATCAAGAAAT TGCGAGTGTTTCTGTACGGTATTAAGCTTGATGTTTTCACGGATTATCAG TCGCTTCTCAGCTACATTAGTATGTTGGAGAAAAAGCCGAAGGTCCAACG GATGTGCGATATACTTAGCCAGTTCCAGTTTAATTTGCGGTACAAACCTG GTAAGCGGAATCAGCTCGCAGATGCCTTGTCCCGTTTGCCTGTCTCTGCC ACCGACGATGATGAAAACGTTTGCCGTATTTTAGACTCGCATGAAGTTAC AGTTTGCTTTATCGGGCGCAGCGGTATCACACTCACGTCCTTGCGTTCGG GTTCGGGCATGCAACCGTTACAGCAGCCGCTGGTCCGGGAAACACGCTCC TTAATCACCGACGAGTAATTACAGCTACAATGGTCATGTATTATTCAAGG CAGTATTTCGTCCACTGCCCCTGTATCGAAGTATCGTACGCAACACCCTG TTAGGAATATTCGAGAGCTACCTTCGAATGTTGTCACCGTGCCCCCCTCT GTCCCACCTTGTCAAGGAGAGCTGAATACCGGTATAATGCTCCACATATT TCCGGTTGCACCCTACAGTCCTTCTGCGGATCCGACCCCGGTGTTTTTGG AAGCGCAGGAGTGACAGGCGCGCCTTTTGGGGGAGCGATTGTATCAGCGG AGCGCGACCGACTGGGCGGCTGAGCATCAGCAAGGTTCATTAGCTAGCAC CGTAATAAAGTATGCATTATCTGAGCAACCGGTCCCGGTTCCGAATTTTG TGACAACGGCGGCCACAGCAGAACATTTCGAGGTGGAGGAGGTTTGCCGT TTAGCTCGGTAGGGTACTCTGGTAACATTAGACGGAAATCGACACCTTTT AGTGAAATGGCCCATGGTCAAGCCCGTGTCTCGACCTAGCGGCGCGAGTG GAAAATTCGAACGTTTGCTCAACAATCAGCCCACCCGCATATACATACCG TTTCTCTTACGCCCATGGGTCATGTATTGCGTAAATAAAGAAGGTTTCCA TTTGGGAGTTCACGCTACTCTAGCGTCGCTCGAACGATATTACTGGTGGA TTGAAATGTCAGCAAGTGTGAAATGGCGGGTGCGTAATTATTCCATCTGT CAAGCGGCGAAAACGTCTCGTCGTCGTGCCCCGTTGGCCCCTCAT
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Coding sequence (CDS) from alignment at H-paniculata_contig22796:2468..4112-

>mRNA_H-paniculata_contig22796.6076.1 ID=mRNA_H-paniculata_contig22796.6076.1|Name=mRNA_H-paniculata_contig22796.6076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at H-paniculata_contig22796:2468..4112- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGATGCCCTCCAACCGCGGAGAGTTGCGTTCACTTCTCGGCAGCAT
TTTATATCTACGCAAGTTCTTGCCGGATCTTTCAAAGGAACTCAGGGAAC
TCAACCACGTTTTTTGTCACGACGTGCCGTTTATATTTTCGGATCGGCAT
GCACGAATCGCCAAGATAATTCTGAATTATCTTGCTAACCCAACCGTACT
CGTATTTCCAGGTCACAACGCTGCAGTGGACGGGACACCCCCTTTCCAAC
TCACAACCAATGCTTGCAAACACGGTCTAGGCTCCGTTCTCGAACCGCTG
CAACCCGATAACACTCTTCGCCCTTTGTTATATATCAGTCGCACTATTGA
TAACAACGACAAGAACTGGAATACTACGGACTTGGAATGCGCTGCATTGT
TATGGACGATCAAGAAATTGCGAGTGTTTCTGTACGGTATTAAGCTTGAT
GTTTTCACGGATTATCAGTCGCTTCTCAGCTACATTAGTATGTTGGAGAA
AAAGCCGAAGGTCCAACGGATGTGCGATATACTTAGCCAGTTCCAGTTTA
ATTTGCGGTACAAACCTGGTAAGCGGAATCAGCTCGCAGATGCCTTGTCC
CGTTTGCCTGTCTCTGCCACCGACGATGATGAAAACGTTTGCCGTATTTT
AGACTCGCATGAAGTTACAGTTTGCTTTATCGGGCGCAGCGGTATCACAC
TCACGTCCTTGCGTTCGGGTTCGGGCATGCAACCGTTACAGCAGCCGCTG
ATGCCGATGCCCTCCAACCGCGGAGAGTTGCGTTCACTTCTCGGCAGCAT
TTTATATCTACGCAAGTTCTTGCCGGATCTTTCAAAGGAACTCAGGGAAC
TCAACCACGTTTTTTGTCACGACGTGCCGTTTATATTTTCGGATCGGCAT
GCACGAATCGCCAAGATAATTCTGAATTATCTTGCTAACCCAACCGTACT
CGTATTTCCAGGTCACAACGCTGCAGTGGACGGGACACCCCCTTTCCAAC
TCACAACCAATGCTTGCAAACACGGTCTAGGCTCCGTTCTCGAACCGCTG
CAACCCGATAACACTCTTCGCCCTTTGTTATATATCAGTCGCACTATTGA
TAACAACGACAAGAACTGGAATACTACGGACTTGGAATGCGCTGCATTGT
TATGGACGATCAAGAAATTGCGAGTGTTTCTGTACGGTATTAAGCTTGAT
GTTTTCACGGATTATCAGTCGCTTCTCAGCTACATTAGTATGTTGGAGAA
AAAGCCGAAGGTCCAACGGATGTGCGATATACTTAGCCAGTTCCAGTTTA
ATTTGCGGTACAAACCTGGTAAGCGGAATCAGCTCGCAGATGCCTTGTCC
CGTTTGCCTGTCTCTGCCACCGACGATGATGAAAACGTTTGCCGTATTTT
AGACTCGCATGAAGTTACAGTTTGCTTTATCGGGCGCAGCGGTATCACAC
TCACGTCCTTGCGTTCGGGTTCGGGCATGCAACCGTTACAGCAGCCGCTG
CCCACCCGCATATACATACCGTTTCTCTTACGCCCATGGGTCATGTATTG
CGTAAATAAAGAAGGTTTCCATTTGGGAGTTCACGCTACTCTAGCGTCGC
TCGAACGATATTACTGGTGGATTGAAATGTCAGCAAGTGTGAAATGGCGG
GTGCGTAATTATTCCATCTGTCAAGCGGCGAAAACGTCTCGTCGTCGTGC
CCCGTTGGCCCCTCATCCCACCCGCATATACATACCGTTTCTCTTACGCC
CATGGGTCATGTATTGCGTAAATAAAGAAGGTTTCCATTTGGGAGTTCAC
GCTACTCTAGCGTCGCTCGAACGATATTACTGGTGGATTGAAATGTCAGC
AAGTGTGAAATGGCGGGTGCGTAATTATTCCATCTGTCAAGCGGCGAAAA
CGTCTCGTCGTCGTGCCCCGTTGGCCCCTCAT
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