prot_H-paniculata_contig22791.6074.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig22791.6074.1
Unique Name	prot_H-paniculata_contig22791.6074.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	101

Homology

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BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.100e-27
Identity = 54/98 (55.10%), Postives = 71/98 (72.45%), Query Frame = 0

Query:    1 LLKSKGDTLSAFQSFVQSVVIPSGFCIERLRTDKGGEYIEKGFKDYCLQTWMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWSTVPE 98
            L+K+K D + A Q F QS+V+P+ F ++ LR DKG E   + F++YCLQ    LEYASTNTPQQ+G +ER GR L AMVRC+L DSGLP+FLW  + +
Sbjct:   30 LMKTKRDAIKALQLFNQSLVVPTRFRLDCLRGDKGTECTCREFREYCLQIGAKLEYASTNTPQQMGANERAGRTLAAMVRCILTDSGLPQFLWGQLMQ 127

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BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 9.410e-25
Identity = 51/94 (54.26%), Postives = 62/94 (65.96%), Query Frame = 0

Query:    1 LLKSKGDTLSAFQSFVQSVVIPSGFCIERLRTDKGGEYIEKGFKDYCLQTWMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWS 94
            L+K K  T+ A Q F QSV+ P    +E +R DKGGEY    F  YC    + L +ASTNTPQ+IG +ER+GR L  MVRC+LADSGLP FLW 
Sbjct:  363 LMKEKSATVDALQLFNQSVLTPHELRLECVRADKGGEYTSWAFCKYCRDVGIKLLFASTNTPQRIGANERIGRTLAGMVRCLLADSGLPHFLWE 456

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BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Match: A0A6H5JWF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF9_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 8.370e-22
Identity = 45/68 (66.18%), Postives = 52/68 (76.47%), Query Frame = 0

Query:   27 IERLRTDKGGEYIEKGFKDYCLQTWMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWS 94
            ++RLR DK  EY    F++YCLQ  + LEYASTNTPQQIG +ER GR L AMVRC+L DSGLPKFLW 
Sbjct:  329 LDRLRGDKEAEYTCLEFREYCLQIGVKLEYASTNTPQQIGANERAGRTLAAMVRCLLTDSGLPKFLWG 396

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BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Match: A0A6H5KCZ9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ9_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 3.250e-21
Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 0

Query:    1 LLKSKGDTLSAFQSFVQSVVIPSGFCIERLRTDKGGEYIEKGFKDYCLQTWMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWS 94
            L++SK + ++    F+Q +VIP+GF +ERLR+D GGEY  + ++D+C    +  E+ +  TPQQ G+SER GR L  +VRC++    LP+FLW 
Sbjct:   83 LIRSKDEAINTLDRFIQDIVIPNGFRLERLRSDNGGEYTSEYYRDFCKTIGIVQEFTAPATPQQNGISERAGRTLMNIVRCLMHGGKLPEFLWG 176

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BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 8.620e-21
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 0

Query:    2 LKSKGDTLSAFQSFVQSVVIPSGFCIERLRTDKGGEYIEKGFKDYCLQTWMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWSTV 96
            +  KGD LS+  ++VQ V IP G  ++ L +D GGEY+   F+DYC  T +   ++S +TPQQ G+SER GR +  M RC++ ++ LPK LW  +
Sbjct:  336 IAKKGDALSSLVNYVQDVAIPLGLRVQYLHSDNGGEYVNSDFRDYCRTTGIIQRFSSPHTPQQNGISERDGRTIMNMARCIINETNLPKHLWGEI 430

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BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.890e-20
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0

Query:    1 LLKSKGDTLSAFQSFVQSVVIPSGFCIERLRTDKGGEYIEKGFKDYCLQTWMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWS 94
            LL+ K DT  A  ++   V    G+ IE +R DKGGE     F+DYC  + + LEYA+TNTPQQIG+SER G+ L  + RC+L D   P  +W 
Sbjct:  466 LLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWG 559

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BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.940e-20
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0

Query:    1 LLKSKGDTLSAFQSFVQSVVIPSGFCIERLRTDKGGEYIEKGFKDYCLQTWMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWS 94
            LL+ K DT  A  ++   V    G+ IE +R DKGGE     F+DYC  + + LEYA+TNTPQQIG+SER G+ L  + RC+L D   P  +W 
Sbjct:  142 LLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWG 235

[Close]

BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.970e-20
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0

Query:    1 LLKSKGDTLSAFQSFVQSVVIPSGFCIERLRTDKGGEYIEKGFKDYCLQTWMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWS 94
            LL+ K DT  A  ++   V    G+ IE +R DKGGE     F+DYC  + + LEYA+TNTPQQIG+SER G+ L  + RC+L D   P  +W 
Sbjct:  338 LLRKKSDTTEAVHTYNMCVAAAGGYRIEAIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWG 431

[Close]

BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.990e-20
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0

Query:    1 LLKSKGDTLSAFQSFVQSVVIPSGFCIERLRTDKGGEYIEKGFKDYCLQTWMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWS 94
            LL+ K DT  A  ++   V    G+ IE +R DKGGE     F+DYC  + + LEYA+TNTPQQIG+SER G+ L  + RC+L D   P  +W 
Sbjct:  142 LLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWG 235

[Close]

BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 3.000e-20
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0

Query:    1 LLKSKGDTLSAFQSFVQSVVIPSGFCIERLRTDKGGEYIEKGFKDYCLQTWMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWS 94
            LL+ K DT  A  ++   V    G+ IE +R DKGGE     F+DYC  + + LEYA+TNTPQQIG+SER G+ L  + RC+L D   P  +W 
Sbjct:  142 LLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWG 235

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig22791.6074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L6R7_9PHAE	1.100e-27	55.10	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1J1_9PHAE	9.410e-25	54.26	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JWF9_9PHAE	8.370e-22	66.18	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KCZ9_9PHAE	3.250e-21	43.62	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KAG6_9PHAE	8.620e-21	43.16	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KVF6_9PHAE	2.890e-20	45.74	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K500_9PHAE	2.940e-20	45.74	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JSL6_9PHAE	2.970e-20	45.74	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JJR8_9PHAE	2.990e-20	45.74	Integrase catalytic domain-containing protein n=11...	[more]
A0A6H5KCT3_9PHAE	3.000e-20	45.74	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..97 e-value: 5.5E-10 score: 40.9
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 29..93
None	No IPR available	PANTHER	PTHR11439:SF265		coord: 29..93
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..100 score: 9.788
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig22791	contig	H-paniculata_contig22791:3490..3792 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig22791.6074.1	mRNA_H-paniculata_contig22791.6074.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig22791 3490..3792 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig22791.6074.1 ID=prot_H-paniculata_contig22791.6074.1|Name=mRNA_H-paniculata_contig22791.6074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp
LLKSKGDTLSAFQSFVQSVVIPSGFCIERLRTDKGGEYIEKGFKDYCLQT
WMSLEYASTNTPQQIGMSERVGRILPAMVRCMLADSGLPKFLWSTVPEIR
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf