mRNA_H-paniculata_contig22785.6072.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Match: X1XSR1_ACYPI (Uncharacterized protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1XSR1_ACYPI) HSP 1 Score: 126 bits (317), Expect = 1.750e-32 Identity = 71/203 (34.98%), Postives = 110/203 (54.19%), Query Frame = 1
Query: 13 YRGMVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDLAITFGGKSNGHDLEGFVDADWVEGVEDRKSTTGYVFKLNSGAIL--VLQEATVSHVVQYRGRVRCCRRSGMETVYLRSLSGSIGFGSRRSTTMCEDNMPAINLSKGSGAHCRAKHIGVRCHGIRECVREGILALKYVQTGDQLAGIKRK 615
YR +VGSLMYA G PD+ YA++ R P + H+ KR+ RY+ + + F +SN +L GFVDADWV DR+STTGY+FK+ + + ++ TV+ + + E +++R L + + EDN AI+LS H R+KHI + H +RE ++EG++ LKY+ T ++LA + K
Sbjct: 29 YRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVLRYVKGTQNNGLCFHRQSNSTELIGFVDADWVSSTIDRRSTTGYLFKVFNCLVSWSTKRQPTVA-LSSTEAEYMTVSNATYEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHHFVREKMKEGLIELKYIPTSNKLADLLTK 230
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Match: UPI001AD9288A (secreted RxLR effector protein 161-like n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD9288A) HSP 1 Score: 124 bits (312), Expect = 1.150e-31 Identity = 76/208 (36.54%), Postives = 115/208 (55.29%), Query Frame = 1
Query: 1 NSTKYRGMVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDLAITF--GGKSNGHDLEGFVDADWVEGVEDRKSTTGYVFKLNSGAIL-VLQEATVSHVVQYRGRVRCCRRSGMETVYLRSLSGSIGFGSRRSTTMCEDNMPAINLSKGSGAHCRAKHIGVRCHGIRECVREGILALKYVQTGDQLAGIKRK 615
++T+Y+ ++GSLMY T PD+ + V +R ME P + H KRI RYL DL + + GGK+ +L F D D+ +DRKST+GYVF L+SGA+ ++ V + + V+++ + S+G+ +ST + DN AI LSK H R+KHI VR H +RE R+G++ LKY + DQ+A + K
Sbjct: 27 DATQYKQVIGSLMYL-TVTRPDLMFVVSLVSRYMEKPTELHMQAVKRILRYLRGTTDLGVCYKKGGKAG--ELVAFSDNDYAGDTDDRKSTSGYVFLLSSGAMAWSSKKQPVVSLSTTEAEFISAASCACQAVWMQRVLKSLGWIQSKSTVIYCDNCSAIKLSKNPVMHGRSKHIDVRFHFLRELSRDGVVDLKYCSSQDQVADVMTK 231
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 130 bits (327), Expect = 2.290e-31 Identity = 74/207 (35.75%), Postives = 103/207 (49.76%), Query Frame = 1
Query: 1 NSTKYRGMVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDLAITFGGKSNGHDLEGFVDADWVEGVEDRKSTTGYVFKLNSGAILVLQEATVSHVVQY--RGRVRCCRRSGMETVYLRSLSGSIGFGSRRSTTMCEDNMPAINLSKGSGAHCRAKHIGVRCHGIRECVREGILALKYVQTGDQLAGIKRK 615
++ KY+ VGSLMYA G PDI YAV ++ P EH+ R F+YL D + + GK +L G+VD+DW DR+S +GYVF L +GA + V Q + E V+LR L + R T + DN AI L+K H KHI VR H +R+ V +G +A +Y+ T DQ+A + K
Sbjct: 1183 DARKYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTL-AGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTK 1388
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Match: A0A5D3DIK7_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DIK7_CUCME) HSP 1 Score: 129 bits (323), Expect = 3.200e-31 Identity = 76/205 (37.07%), Postives = 111/205 (54.15%), Query Frame = 1
Query: 1 NSTKYRGMVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDLAITFGGKSNGHDLEGFVDADWVEGVEDRKSTTGYVFKLNSGAILVLQEATVSHVVQYRGRVRCCRRSGMETVYLRSLSGSIGFGSRRSTTMCEDNMPAINLSKGSGAHCRAKHIGVRCHGIRECVREGILALKYVQTGDQLAGIKRK 615
NST Y+ MVGSLMY +T PDI YAV +R ME P + H KRI RY+ PDL I + K + GF D+D+ + DRKST+GYVF L+SG I + +V + + ++LR++ ++ + ++ + DN I LS+ H R+KHI VR H +R + +GI+ L Y ++ DQ+A I K
Sbjct: 331 NSTLYKQMVGSLMYLTT-TKPDIMYAVSLISRFMESPTEFHLLASKRILRYIKGTPDLGILYQRKRKLN-FVGFSDSDYAGDLNDRKSTSGYVFMLDSGVIS--WSSKKQPIVTTEAELVAAASRACQAIWLRNILENLHYKQEEASIIICDNTSTIKLSRNPVLHGRSKHISVRYHYLRHLINDGIINLSYCKSEDQVADILTK 531
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Match: A0A2P6SBD8_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6SBD8_ROSCH) HSP 1 Score: 129 bits (325), Expect = 3.390e-31 Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 1
Query: 1 NSTKYRGMVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDLAITFGGKSNGHDLEGFVDADWVEGVEDRKSTTGYVFKLNSGAIL-VLQEATVSHVVQYRGRVRCCRRSGMETVYLRSLSGSIGFGSRRSTTMCEDNMPAINLSKGSGAHCRAKHIGVRCHGIRECVREGILALKYVQTGDQLAGIKRK 615
N+T Y+ +VGSLMY +T PDI +AV +R ME P ++H KRI RYL DL I F K +L GF D+D+ ++DRKST+G+VF + SGAI ++ + + S + ++LR + G + + T + DN +I LSK S H R+KHI VR H +R+ ++EG + L Y + DQ+A I K
Sbjct: 463 NATLYKQIVGSLMYLTT-TRPDIMFAVSMVSRYMEKPMEDHLVAVKRILRYLKGTADLGI-FYKKFQSSNLCGFTDSDYAGDMDDRKSTSGFVFMMGSGAISWSAKKQQIVTLSTTEAEFVAAASSSCQAIWLRRMLGVLQNQQQSPTIIYCDNSSSIKLSKNSVLHGRSKHIDVRYHFLRDLMKEGAIELVYCPSNDQVADILTK 666
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Match: A0A2N9EI16_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EI16_FAGSY) HSP 1 Score: 129 bits (325), Expect = 4.060e-31 Identity = 78/203 (38.42%), Postives = 110/203 (54.19%), Query Frame = 1
Query: 13 YRGMVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDLAITFGGKSNGHDLEGFVDADWVEGVEDRKSTTGYVFKLNSGAIL--VLQEATVSHVVQYRGRVRCCRRSGMETVYLRSLSGSIGFGSRRSTTMCEDNMPAINLSKGSGAHCRAKHIGVRCHGIRECVREGILALKYVQTGDQLAGIKRK 615
YR +VGSL+Y T PDI ++V +R M P + H+ T KRI RYL L I + K N ++L GF D+DWV ++DRKST+GY+F L S I ++ TV+ + + E V+LR + + T +C DNM AI ++K H R KHI +R H IR+ V +G + LK++ T DQ A I K
Sbjct: 787 YRSLVGSLIYL-TNTRPDIVHSVSLISRFMNQPSKLHYATAKRILRYLQGTKKLGILYK-KENDNNLVGFTDSDWVGSLDDRKSTSGYIFCLGSKVIAWSSKKQKTVA-LSSAEAEYIAANDAACEAVWLRKILSDLQQKIEEPTVICCDNMSAIAMTKNPVFHARTKHIELRHHFIRDLVSQGEIQLKFISTNDQPADILTK 986
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Match: A0A2N9H8E1_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H8E1_FAGSY) HSP 1 Score: 129 bits (325), Expect = 4.220e-31 Identity = 78/203 (38.42%), Postives = 110/203 (54.19%), Query Frame = 1
Query: 13 YRGMVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDLAITFGGKSNGHDLEGFVDADWVEGVEDRKSTTGYVFKLNSGAIL--VLQEATVSHVVQYRGRVRCCRRSGMETVYLRSLSGSIGFGSRRSTTMCEDNMPAINLSKGSGAHCRAKHIGVRCHGIRECVREGILALKYVQTGDQLAGIKRK 615
YR +VGSL+Y T PDI ++V +R M P + H+ T KRI RYL L I + K N ++L GF D+DWV ++DRKST+GY+F L S I ++ TV+ + + E V+LR + + T +C DNM AI ++K H R KHI +R H IR+ V +G + LK++ T DQ A I K
Sbjct: 1106 YRSLVGSLIYL-TNTRPDIVHSVSLISRFMNQPSKLHYATAKRILRYLQGTKKLGILYK-KENDNNLVGFTDSDWVGSLDDRKSTSGYIFCLGSKVIAWSSKKQKTVA-LSSAEAEYIAANDAACEAVWLRKILSDLQQKIEEPTVICCDNMSAIAMTKNPVFHARTKHIELRHHFIRDLVSQGEIQLKFISTNDQPADILTK 1305
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Match: UPI001E692AC7 (secreted RxLR effector protein 161-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E692AC7) HSP 1 Score: 122 bits (307), Expect = 4.540e-31 Identity = 78/210 (37.14%), Postives = 110/210 (52.38%), Query Frame = 1
Query: 1 NSTKYRGMVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDLAITFGGKSNGHDLEGFVDADWVEGVEDRKSTTGYVFKLNSGAILVLQE----ATVSHV-VQYRGRVRCCRRSGMETVYLRSLSGSIGFGSRRSTTMCEDNMPAINLSKGSGAHCRAKHIGVRCHGIRECVREGILALKYVQTGDQLAGIKRK 615
+ST+++ +VG LMY T PD+ Y+V AR ME P + H KRI RYL I + LEG+ D+D+V +DRKST+GY+FK+ SGAI + T+S +Y C + V+LR + +G R + T+ DN +I LSK H R KHI VR H R+ ++GI+ L + TG+Q A I K
Sbjct: 6 DSTEFKQIVGCLMYL-TATRPDLCYSVCLIARYMERPTEIHLAAAKRILRYLKGTMKYGILYEKGEVSIKLEGWTDSDYVGDSDDRKSTSGYIFKVGSGAISCSSKKQPIVTLSTTEAEYVAAASCA----CQAVWLRKILKQLGQEQRNANTIFCDNSSSIKLSKNPILHGRCKHIDVRYHFSRDLTKQGIVELVHCSTGEQTADIMTK 210
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS) HSP 1 Score: 125 bits (314), Expect = 7.300e-31 Identity = 73/204 (35.78%), Postives = 110/204 (53.92%), Query Frame = 1
Query: 7 TKYRGMVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDLAITFGGKSNGHDLEGFVDADWVEGVEDRKSTTGYVFKLNSGAIL-VLQEATVSHVVQYRGRVRCCRRSGMETVYLRSLSGSIGFGSRRSTTMCEDNMPAINLSKGSGAHCRAKHIGVRCHGIRECVREGILALKYVQTGDQLAGIKRK 615
T ++ +VGSL Y T PD+ Y+V+ +R ME+P ++H KRI RY+ I + + G L GFVD+D+ V+DRKST+GYVF L GA+ ++ + + + ++LR++ G IG+ TT+ DN I LSK H R+KHI VR + +R+ V E ++ LK+ T DQL+ I K
Sbjct: 154 TMFKQLVGSLRYL-TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTK 355
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Match: A0A1J3IBS4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IBS4_NOCCA) HSP 1 Score: 129 bits (323), Expect = 7.370e-31 Identity = 70/206 (33.98%), Postives = 113/206 (54.85%), Query Frame = 1
Query: 1 NSTKYRGMVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDLAITFGGKSNGHDLEGFVDADWVEGVEDRKSTTGYVFKLNSGAIL-VLQEATVSHVVQYRGRVRCCRRSGMETVYLRSLSGSIGFGSRRSTTMCEDNMPAINLSKGSGAHCRAKHIGVRCHGIRECVREGILALKYVQTGDQLAGIKRK 615
++T++R +VG L+Y T PDI +AV +R M P ++HFG KR+ RY++ + + + S +L GF D+DW V+DRKST+G+VF L SGA+ ++ V+ + + + V+LR + + ++TT+ DN I ++K H R KHI ++ H IR+ V EG +AL+Y T +Q A + K
Sbjct: 670 DATRFRSLVGGLIYL-THTRPDISFAVSAISRFMHCPTRQHFGAAKRLLRYIAATTEFGLWYNTVSE-FELVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATSAACQAVWLRRILEDVKQEQLKATTIFCDNKATIAMTKNPAYHGRTKHISIKVHFIRDLVNEGSVALEYCSTNEQRADVLTK 873 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22785.6072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22785.6072.1 >prot_H-paniculata_contig22785.6072.1 ID=prot_H-paniculata_contig22785.6072.1|Name=mRNA_H-paniculata_contig22785.6072.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=200bp MVGSLMYASTGITPDIEYAVHQAARRMEDPCQEHFGTCKRIFRYLSTVPDback to top mRNA from alignment at H-paniculata_contig22785:13..633+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22785.6072.1 ID=mRNA_H-paniculata_contig22785.6072.1|Name=mRNA_H-paniculata_contig22785.6072.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=621bp|location=Sequence derived from alignment at H-paniculata_contig22785:13..633+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22785:13..633+ >mRNA_H-paniculata_contig22785.6072.1 ID=mRNA_H-paniculata_contig22785.6072.1|Name=mRNA_H-paniculata_contig22785.6072.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1200bp|location=Sequence derived from alignment at H-paniculata_contig22785:13..633+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |