prot_H-paniculata_contig22781.6071.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22781.6071.1
Unique Nameprot_H-paniculata_contig22781.6071.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length200
Homology
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE)

HSP 1 Score: 175 bits (443), Expect = 5.490e-51
Identity = 88/199 (44.22%), Postives = 122/199 (61.31%), Query Frame = 0
Query:    2 VGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIG-FGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 199
            VG +MY    TRPD+A AV   ++   DPCP  +   KR+ RYL   P+ G+ F R+  G  + G+ DADWA D+E R+ST+ YVF +NGG ISW S+KQ+ V    TE EY+A  EA KE V+L+  LG +G      +  +F+DN  +I L+K    H RTKHI +R+  +RE +  G + L+Y  T D LAD++TK
Sbjct:   41 VGGIMYLMVATRPDLAAAVGSLSQFSSDPCPTHWQALKRVLRYLQATPNHGLEFTREE-GSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADMMTK 238          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: H3G656_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G656_PHYRM)

HSP 1 Score: 171 bits (433), Expect = 2.970e-50
Identity = 86/199 (43.22%), Postives = 123/199 (61.81%), Query Frame = 0
Query:    2 VGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIG-FGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 199
            VG+LMY    TRPD+A AV   ++   DPCP  +   KR+ RYL   P  G+ F R+ +  G+ G+ DADWA D+E R+ST+ Y F +NGG ISW S+KQ+ V    TE EY+A  EA +E V+L+  L  +G      +  ++ DN  +I L+K  + H RTKHI +R+  +RE + +G + L+Y+ T D LADI+TK
Sbjct:   11 VGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREDS-LGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYKDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYISTTDMLADIMTK 208          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 175 bits (444), Expect = 3.870e-50
Identity = 93/199 (46.73%), Postives = 127/199 (63.82%), Query Frame = 0
Query:    1 MVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 199
            +VGSL Y  T TRPD+ Y+V+  +R ME+P        KRI RY+      GI + ++  G  L GFVD+D+A DV+DRKST+ YVF L GGA+SW S+KQ +VT   TE E++AA     + ++LR +LG IG+     TTLF DN S I LSK    H R+KHI VR+  +R+ + E ++ LK+  T DQL+DI+TK
Sbjct:  159 LVGSLRYL-TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRY-KQGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTK 355          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A6A4ZBJ3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZBJ3_9STRA)

HSP 1 Score: 172 bits (437), Expect = 6.420e-50
Identity = 87/199 (43.72%), Postives = 122/199 (61.31%), Query Frame = 0
Query:    2 VGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIG-FGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 199
            VG LMY   GTRPD+A AV   ++   DPCP  +   KR+FRY+      GI F   S   GL+G+ DADWA D+E R+ST+ Y F +NGG ISW S+KQ+ V    TE EY+A  EA +E ++L+  L  IG    + +  +++DN  +I L+K    H RTKHI +R+  +RE + +G + L+Y  T D LAD++TK
Sbjct:   64 VGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIQGTKTHGIVFQAGSED-GLQGYSDADWAGDIETRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALTEATQEAIWLKAFLCEIGEMETKSAVKIYEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCSTKDMLADLMTK 261          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: UPI001372DC10 (Ty1/Copia family RNAse HI domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001372DC10)

HSP 1 Score: 173 bits (438), Expect = 8.790e-50
Identity = 88/199 (44.22%), Postives = 122/199 (61.31%), Query Frame = 0
Query:    2 VGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIG-FGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 199
            VG LMY   GTRPD+A AV   ++   DPCP  +   KR+FRY+      G+ F   S   GL+G+ DADWA D+E R+ST+ Y F +NGG ISW S+KQ+ V    TE EY+A  EA +E V+L+  L  +G      +  +++DN  +I L+K    H RTKHI +R+  +RE + +G + L+YV T D LADI+TK
Sbjct:   90 VGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIRGTKTHGLVFQASSED-GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTLDMLADIMTK 287          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: H3GB36_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB36_PHYRM)

HSP 1 Score: 174 bits (441), Expect = 1.280e-49
Identity = 88/199 (44.22%), Postives = 123/199 (61.81%), Query Frame = 0
Query:    2 VGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIG-FGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 199
            VG LMY   GTRPD+A AV   ++   DPCP  +   KR+FRY+      GI F    N  GL+G+ DADWA D+E R+ST+ Y F +NGG ISW S+KQ+ V    TE EY+A  EA +E V+L+  L  +G      +  +++DN  +I L+K  + H RTKHI +R+  +RE + +G + L+YV T D LAD++TK
Sbjct:  146 VGCLMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVFRYIQGTKTHGIEFQASCND-GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTK 343          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: H3GB71_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB71_PHYRM)

HSP 1 Score: 171 bits (434), Expect = 2.840e-49
Identity = 86/199 (43.22%), Postives = 124/199 (62.31%), Query Frame = 0
Query:    2 VGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIG-FGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 199
            VG+LMY    TRPD+A AV   ++   DPCP  +   KR+ RYL   P  G+ F R+ +  G+ G+ DADWA D+E R+ST+ Y F +NGG ISW S+KQ+ V    TE EY+A  EA +E V+L+  L  +G      +  +++DN  +I L+K  + H RTKHI +R+  +RE + +G + L+YV T D LAD++TK
Sbjct:   81 VGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREDSV-GMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTK 278          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A151SR20_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SR20_CAJCA)

HSP 1 Score: 171 bits (433), Expect = 2.840e-49
Identity = 92/199 (46.23%), Postives = 129/199 (64.82%), Query Frame = 0
Query:    1 MVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 199
            +VGSLMY +T TRPDI YAV   +R ME P        KR+FRYL    DLG+ F +K NG  L GF D+++A D++DR+ST+ +VF +  GAISW S+KQQ+VT   TE E++AA  +  + ++LR +L  + F  +G T +  DN S I LS+    H R+KHI VR+  +R+ + E I+ L Y ++ DQ+ADILTK
Sbjct:   86 IVGSLMYLTT-TRPDIMYAVCLISRYMERPTELHLKAAKRVFRYLKGTTDLGV-FYKKINGSILTGFTDSNYAGDMDDRRSTSGHVFMIGSGAISWASKKQQVVTLSTTEAEFIAAATSACQAIWLRRILEELHFYQQGPTVIHCDNSSTIKLSRNPILHGRSKHIDVRYHFLRDLVIEKIIDLVYCRSEDQVADILTK 282          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: UPI0009AB427F (uncharacterized protein LOC109950541 n=1 Tax=Prunus persica TaxID=3760 RepID=UPI0009AB427F)

HSP 1 Score: 171 bits (434), Expect = 3.870e-49
Identity = 89/199 (44.72%), Postives = 131/199 (65.83%), Query Frame = 0
Query:    1 MVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 199
            ++GSLMY  T TRPDI YAV   +R ME P     +  KRI RY+    D G+ F ++ +G G  G+ D+D+A D++DRKST+ ++F LN GAISW S+KQQ+VT   TE EY+AA  +  + ++LR++   +G   +G TT++ DNIS I LS+    H R+KHI VR+  +R+   +  + L+Y ++G+Q+ADILTK
Sbjct:  103 IIGSLMYL-TYTRPDIMYAVSLVSRYMEKPTEMHLNAAKRILRYVKGTIDYGV-FYKREDGSGFVGYTDSDYAGDIDDRKSTSGHIFLLNSGAISWSSKKQQIVTLSSTEAEYVAAAASSCQAMWLRKIFEVLGNVQKGPTTIYCDNISTIKLSRNPVMHGRSKHIDVRFHFLRDLCSDEKIVLEYCKSGEQVADILTK 299          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA)

HSP 1 Score: 168 bits (425), Expect = 7.440e-49
Identity = 86/199 (43.22%), Postives = 125/199 (62.81%), Query Frame = 0
Query:    1 MVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 199
            +VG+LMY +T TRP+IAYAV + A+  E      +   KRI +YL T  D+G+ F+    G  L G+ DA+WA D++ R+STT YVF LNG AISW S++Q  V    TE EY+A   A++E V+LR+LL  +G+  +G+TT++ DN   I L+K    H RTKHI +++  +RE +    + L+Y  T + +AD  TK
Sbjct:   25 LVGALMYLATSTRPNIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGE-LVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTK 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A090C2V0_HYAAE5.490e-5144.22RxLR effector candidate protein (Fragment) n=3 Tax... [more]
H3G656_PHYRM2.970e-5043.22Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
A0A6D2JBX5_9BRAS3.870e-5046.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A4ZBJ3_9STRA6.420e-5043.72Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
UPI001372DC108.790e-5044.22Ty1/Copia family RNAse HI domain-containing protei... [more]
H3GB36_PHYRM1.280e-4944.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB71_PHYRM2.840e-4943.22Uncharacterized protein n=5 Tax=Phytophthora ramor... [more]
A0A151SR20_CAJCA2.840e-4946.23Retrovirus-related Pol polyprotein from transposon... [more]
UPI0009AB427F3.870e-4944.72uncharacterized protein LOC109950541 n=1 Tax=Prunu... [more]
A0A2P4XPH2_9STRA7.440e-4943.22RxLR effector candidate protein (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..176
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22781contigH-paniculata_contig22781:3162..3761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22781.6071.1mRNA_H-paniculata_contig22781.6071.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22781 1103..3761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22781.6071.1 ID=prot_H-paniculata_contig22781.6071.1|Name=mRNA_H-paniculata_contig22781.6071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=200bp
MVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPD
LGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRK
QQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISA
INLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like