mRNA_H-paniculata_contig22781.6071.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22781.6071.1
Unique NamemRNA_H-paniculata_contig22781.6071.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 204 bits (519), Expect = 9.830e-56
Identity = 107/267 (40.07%), Postives = 160/267 (59.93%), Query Frame = 2
Query: 1769 LSRVLGIEVRCDRPNGIITISQCSYIREVLKRYGFDECRGVPTTAE-GK--VEISAPESADKPSEQKGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 2560
            +  VLG+ +R DR  G +TISQ +Y++ +LKR+G ++C+ V T  E GK   E+   E+    +E + ++G L Y +T TRPD+A AV   ++ M  P  + +   KR+ RY+    + G+ F+ KS    L G+ DADWA D++ R+ST+ YVF++NG  +SWCS++Q  VT   TE EY+A   A +E V+LR LL  IG      + + +DN  AI LSK  R H RTKHI V +  +RE + +  + + Y  T   LAD++TK
Sbjct:   21 VKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDENPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADVMTK 287          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 196 bits (497), Expect = 1.280e-52
Identity = 112/285 (39.30%), Postives = 166/285 (58.25%), Query Frame = 2
Query: 1733 KSAF*DERLGLSLSRVLGIEVRCDRPNGIITISQCSYIREVLKRYGFDECRGVPTTAEGKVEISAPESADKPSEQKG---------MVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 2560
            K  F  + LG  L   LGIE+  +R +  I ++Q +YI+ + +++G ++C+ V T A+   ++       KPSE +          +VG+LMY +T TRPDIA AV + A+  E      +   KRI +YL T  DLG+ F+  + G  L G+ DA+WA D++ R+STT YVF LNG AISW S++Q  V    TE EY+A   A +E V+LR+LL  +G  C G+TT F DN   I L+K    H RTKHI +++  +RE + + ++ L+Y  T + +AD  TK
Sbjct:   18 KREFSIKELG-ELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLV------KPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTK 294          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 197 bits (502), Expect = 1.480e-52
Identity = 114/262 (43.51%), Postives = 155/262 (59.16%), Query Frame = 2
Query: 1781 LGIEVRCDRPNGIITISQCSYIREVLKRYGFDECRGV--PTTAEGKVEISAPESADKPSEQKGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 2560
            LG+EV  D     I I+Q  Y  E LK+YG + C  V  P     K+  +    A  P+  K +VGSL Y  T TRPD+ Y+V+  +R ME+P        KRI RY+      GI + ++  G  L GFVD+D+A DV+DRKST+ YVF L GGA+SW S+KQ +VT   TE E++AA     + ++LR +LG IG+     TTLF DN S I LSK    H R+KHI VR+  +R+ + E ++ LK+  T DQL+DI+TK
Sbjct:   98 LGVEVIQDGRG--IFINQQKYAEETLKKYGMEGCNAVKNPIVPGNKLSRAGGGDAADPTMFKQLVGSLRYL-TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRY-KQGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTK 355          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM)

HSP 1 Score: 196 bits (497), Expect = 2.240e-52
Identity = 113/264 (42.80%), Postives = 148/264 (56.06%), Query Frame = 2
Query: 1778 VLGIEVRCDRPNGIITISQCSYIREVLKRYGFDECRGVPTTA---EGKVEISAPESADKPSEQKGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 2560
            VLG+EV  DR    IT+SQC Y+ E+LK  G+ +   + T     E   ++ APE  D  + Q G +GSLMYA  GTRPD+AY V   ++    P           F+YL    D  + FD K     L G+VDADWA DV DR+S + Y F L GGAISW S+KQ       TE EY+ A  A KE  +LR  L  IG  C+ +T L  DN SA+ ++     H RTKHI +R+  +RE +  G + L+YV TGDQ+AD+L K
Sbjct:   52 VLGLEVIHDRNARTITLSQCRYVEEILKCAGYSDACPIATPVLANEHMAKVDAPE-VDVLTYQSG-IGSLMYAMLGTRPDLAYTVGVLSQHTAKPGEAHQHALVHAFKYLRGTADYQLVFDGKKPWE-LTGYVDADWAGDVNDRRSISGYTFLLAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMK 312          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI)

HSP 1 Score: 192 bits (488), Expect = 1.010e-51
Identity = 112/266 (42.11%), Postives = 152/266 (57.14%), Query Frame = 2
Query: 1802 DRPNGIITISQCSYIREVLKRYGFDECRGVPTTAEGKVEISAPESAD-KPSEQKGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNG---HGLE--GFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIG---FGCRGSTT----LFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 2560
            D     ++ISQ  Y+  +LKR+G  +CR V T  E   ++     A+  P   +  +G+LMYA  G+RPDIA+AV   ++    P  + ++   R+FRYL     L +T+ +       HGL   G+ DADWA D  DR+ST+AYVFKL GGAISWCSRKQQ +    TE EY+A   A KE ++L  LL  +    F    S      +  DN SA+ L+K S  H RTKHI VR   IR+ +  G L ++YV TGDQ+AD+LTK
Sbjct:    2 DHDRHTLSISQEQYVETILKRHGMSDCRPVSTPMEANFKLDKLAEAEIDPKPYQSALGALMYAMLGSRPDIAFAVGTLSKHASTPGTEHWNALMRVFRYLRGTSGLRLTYGKDLKPLCEHGLTVVGYSDADWAGDRNDRRSTSAYVFKLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADVLTK 267          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM)

HSP 1 Score: 206 bits (524), Expect = 2.360e-51
Identity = 117/264 (44.32%), Postives = 154/264 (58.33%), Query Frame = 2
Query: 1778 VLGIEVRCDRPNGIITISQCSYIREVLKRYGFDECRGVPTTA---EGKVEISAPESADKPSEQKGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 2560
            VLG+EV  DR    I +SQ  Y+ E+L+R G+ + R + T A   E   ++ APE  D  + Q G +GSLMYA  GTRPD+AY V   ++    P         R F+YL    D  + FD K     L G+VDADWA DV DR+S + Y F L GGA+SW S+KQ       TE EY+AA  A KE  +LR  LG IG  C+ +T L  DN SA+ +++    H RTKHI VR+  +RE +  G + L+YV TGDQ+AD+LTK
Sbjct:  858 VLGLEVIRDRNARTIALSQRRYVEEILERAGYSDARPIATPALANEHMAKVDAPE-VDVLTYQSG-IGSLMYAMLGTRPDLAYTVGVLSQHTAKPGEAHQRALVRAFKYLRGTADYQLVFDGKKPWE-LTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTK 1118          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: H3GB71_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB71_PHYRM)

HSP 1 Score: 192 bits (488), Expect = 2.680e-51
Identity = 100/273 (36.63%), Postives = 158/273 (57.88%), Query Frame = 2
Query: 1769 LSRVLGIEVRCDRPNGIITISQCSYIREVLKRYGFDECRGVPTTAEGKVEISAP--------ESADKPSEQKGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIG-FGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 2560
            L   LG+E++ D  +G +T+ Q  +++ +L ++G  + + V T  +  ++++          E   K    +  VG+LMY    TRPD+A AV   ++   DPCP  +   KR+ RYL   P  G+ F R+ +  G+ G+ DADWA D+E R+ST+ Y F +NGG ISW S+KQ+ V    TE EY+A  EA +E V+L+  L  +G      +  +++DN  +I L+K  + H RTKHI +R+  +RE + +G + L+YV T D LAD++TK
Sbjct:    7 LEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREDSV-GMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTK 278          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A1W7R6K6_AEDAL (Putative retrovirus-related pol polyprotein from transposon tnt (Fragment) n=4 Tax=Aedes albopictus TaxID=7160 RepID=A0A1W7R6K6_AEDAL)

HSP 1 Score: 205 bits (521), Expect = 7.420e-51
Identity = 171/519 (32.95%), Postives = 246/519 (47.40%), Query Frame = 3
Query:  228 LFEMARASMITANMARRCWAEALRSAVYCLNRAPTRPHNGGTPYEKWHGETPKFDHLRVFGCTAY----GMS*HKLDDKAWAGVFLAYDEDSPNYRIYNPENKSAQLSRNVRFEEEDFVTGHRGQQEHDGTRNIEDLFSTPPVTPAVTRSRA--QGEQGSGTNTEDRTSASQMPPVLPTHLLPATSANPFSALSNDDDGKSNGDSKMKDAEPAVEDAPSARTAAPASWGNTTKQSGTEARRPRDRSPIRTWAR-ARKSREEDPGATTRVEKVKSTGNLTEAVSKREPKSAAEPLKGPKAEKWHAAMEEEWRALVDNGTWKSEGLGRLPAGRKAVRTK*IFKRKLKEDGSVACYQARLVAQGLSQVEGEDLFETSAPVARMSTLRTAFSLTAEHDFELKGMDVNAVYLNAPVEEELLVKLPPEFSSFSRDIPFVRRLRESLYGLRQSGRNWNNTLDDFLVGIGPDHSTTVSCLYSSRDEGGETNLLVAVYVDDLVIAGRREKV-DEFKHNISQRFRMKDL 1760
            + E  R+ +  A M ++ WAEA+ +AVY +NR PTR   G TP E W G+ P   HL++FG  A          KLD K+   VF+ Y +D   YR+YN       +SR+V+   E    G     + +    +E  FS     P  T +    Q E  S    ++R++A Q             +A+  S+ S +D          +DA   +   P  ++  PAS  +  ++SG E R P   +   T++    +   ++P   T+     S   ++   +  +P S  E L  P  + W  AM+ E  AL  N TW+ E    LP G KA++ K +FK K   +G V CY+ARLV +G SQ  G D  E  APV R STLR   +L  + D E+  MD    +L   +E+E++    PE   F  D   V RL+ SLYGL+QS R WN  LD  L   G   S T  CLY   +  G   L + +YVDD +I     K+ ++ K  +  RFRMKDL
Sbjct:  589 ILEKVRSMLNDAKMQKKFWAEAVNTAVYLINRCPTRTLQGKTPEEAWTGKKPYVGHLKIFGSVAMVHVPKQRRLKLDPKSTKCVFVGYADDVKGYRLYNATTGEIIISRDVKIINEGQCDGEVVNAD-ETVEFLEIEFSEAMDEPRATATPEVEQIELESTAGDDERSNAGQ-----------DEAASDTSSSSGND---------FEDANDEIALPP--QSVRPASVEHEFRRSGRERRHPGKYTDFITYSTYTGQCVSQNPQ--TKASVTNSGFKMSNIETMSDPVSYEEALSRPDRQLWLEAMQAEINALGTNETWRLED---LPVGAKAIKNKWVFKIKRGPNGEVDCYKARLVVKGCSQRPGIDYDEVYAPVVRYSTLRYLMALAVKFDLEIDQMDAVTAFLQGKLEDEVIHMQQPE--GFVTDPTKVCRLQRSLYGLKQSSRIWNQQLDKTLREFGLQQSRTDPCLYYLIN--GRRVLFITIYVDDFLIFTNDAKMREQLKTFLCNRFRMKDL 1075          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: A0A446MQR5_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446MQR5_TRITD)

HSP 1 Score: 204 bits (520), Expect = 1.050e-50
Identity = 171/524 (32.63%), Postives = 247/524 (47.14%), Query Frame = 3
Query:  237 MARASMITANMARRCWAEALRSAVYCLNRAPTRPHNGGTPYEKWHGETPKFDHLRVFGCTAY----GMS*HKLDDKAWAGVFLAYDEDSPNYRIYNPENKSAQLSRNVRFEEE---DFVTGHRGQQEHDGTRNIEDLFSTPPVTPAVTRSRAQGEQGSGTNTEDRTSASQMPP---VLPTHLLPATSANPFSALSNDDDGKSNGDSKMKDAEPAVEDAPSARTAAPASWGNTTKQSGTEARRPRDRSPIRTWARARKSREEDPGATTRVEKVKSTGNLTEAVSKREPKSAAEPLKGPKAEKWHAAMEEEWRALVDNGTWKSEGLGRLPAGRKAVRTK*IFKRKLKEDGSVACYQARLVAQGLSQVEGEDLFETSAPVARMSTLRTAFSLTAEHDFELKGMDVNAVYLNAPVEEELLVKLPPEFSSFSRDIPFVRRLRESLYGLRQSGRNWNNTLDDFLVGIGPDHSTTVSCLYSSRDEGGETNLLVAVYVDDLVIAGRR-EKVDEFKHNISQRFRMKDLDSLSH 1775
            MAR  + + NM    W EA+ +A+Y LNRAPT+   G TPYE W+G  P   HLR FGC A+    G S  KL D++   V + Y++ S  YR+ NPE     +SR+V FEE     + +G       D  R +  +   P  T +V    AQ     G N E+R     + P   VLP   +      P S+++ +   +S+   KM+  +  + DA S                               W+         P     +E+++        +   EP    + LK    E W  AMEEE +++ +N TW+   +   P G +A+  K +FK K   +G+V  ++ARLVA+G  Q  G D  E  APVAR+ T+R   +L A   + +  MDV + +LN  +EEE+ V  PP F    ++   V +LR++LYGLRQ+ R WN  LD  L+ +G   S     +Y      G   LLV VYVDDL+I G   E+V  FK  +   F M DL  LS+
Sbjct:  693 MARCLLKSQNMPGCYWGEAVATAIYILNRAPTKSVAGKTPYEAWNGYKPNVGHLRTFGCLAHVKVTGPSGGKLADRSIPMVLIGYEKGSNAYRLVNPETNRVCVSRDVVFEESKGWQWSSGDDVTISDDTDRFL--VHFEPEQTESVNDHAAQ----EGENAENREGTEPITPRQAVLPGSPVIPAMVTPISSVAAESP-ESSAPLKMRSLD-EIFDATSPH-----------------------------WS---------PADYDHMEELELC-----MLGAEEPTHHNDALKH---EHWKKAMEEELKSIKENDTWE---MVTPPTGVRAIGLKWVFKLKKDVEGNVIRHKARLVAKGYVQRHGIDFDEVFAPVARLETVRLLMALAANEGWRVHHMDVKSAFLNGELEEEVYVAQPPGFIETGKEGK-VLKLRKALYGLRQAPRAWNLKLDQTLLSLGFIRSPVEHAVYMKNS--GNARLLVGVYVDDLIITGSSAEEVAMFKEQMKDMFSMSDLGLLSY 1156          
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 193 bits (491), Expect = 1.090e-50
Identity = 108/279 (38.71%), Postives = 163/279 (58.42%), Query Frame = 2
Query: 1733 KSAF*DERLGLSLSRVLGIEVRCDRPNGIITISQCSYIREVLKRYGFDECRGVPTTAEGKVEISAPESAD---KPSEQKGMVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPDLGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRKQQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISAINLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK 2560
            K  F  + LG  L   LGIE+  +R +  I ++Q +YI+ + +++G ++C+ V T A+   ++  P   +        + +VG+LMY +T TRPDIA AV + A+  E      +   KRI +YL T  DLG+ F+  + G  L G+ DA WA D++ R+STT YVF LNG AISW S++Q  V    TE EY+A   A +E V+LR+LL  +G  C  +TT+F DN   I L+K    H RTKHI +++  +RE + + ++ L+Y  T + +AD  TK
Sbjct:  114 KREFSIKELG-ELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPAEDEVFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTK 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22781.6071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9D5L2_PARCT9.830e-5640.07Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
H3GB69_PHYRM1.280e-5239.30Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2JBX5_9BRAS1.480e-5243.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9ZSL8_9AGAM2.240e-5242.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060SU91_PYCCI1.010e-5142.11Uncharacterized protein n=2 Tax=Pycnoporus cinnaba... [more]
A0A4Y9ZY34_9AGAM2.360e-5144.32Integrase catalytic domain-containing protein n=1 ... [more]
H3GB71_PHYRM2.680e-5136.63Uncharacterized protein n=5 Tax=Phytophthora ramor... [more]
A0A1W7R6K6_AEDAL7.420e-5132.95Putative retrovirus-related pol polyprotein from t... [more]
A0A446MQR5_TRITD1.050e-5032.63Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
H3GB17_PHYRM1.090e-5038.71Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22781contigH-paniculata_contig22781:1103..3761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score174.1
Seed ortholog evalue6.6e-41
Seed eggNOG ortholog7425.NV18849-PA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3BGB6@33208,3D5G4@33213,3SKEY@50557,41ZUZ@6656,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelInsecta
Best eggNOG OGNA|NA|NA
Exons3
Model size2563
Cds size600
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22781.6071.1prot_H-paniculata_contig22781.6071.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22781 3162..3761 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929634.1303334-UTR-H-paniculata_contig22781:1102..15351622929634.1303334-UTR-H-paniculata_contig22781:1102..1535Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22781 1103..1535 +
1691480944.6573305-UTR-H-paniculata_contig22781:1102..15351691480944.6573305-UTR-H-paniculata_contig22781:1102..1535Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22781 1103..1535 +
1622929634.1436987-UTR-H-paniculata_contig22781:1547..30731622929634.1436987-UTR-H-paniculata_contig22781:1547..3073Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22781 1548..3073 +
1691480944.6702056-UTR-H-paniculata_contig22781:1547..30731691480944.6702056-UTR-H-paniculata_contig22781:1547..3073Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22781 1548..3073 +
1622929634.154173-UTR-H-paniculata_contig22781:3157..31611622929634.154173-UTR-H-paniculata_contig22781:3157..3161Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22781 3158..3161 +
1691480944.6827917-UTR-H-paniculata_contig22781:3157..31611691480944.6827917-UTR-H-paniculata_contig22781:3157..3161Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22781 3158..3161 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929634.1653683-CDS-H-paniculata_contig22781:3161..37611622929634.1653683-CDS-H-paniculata_contig22781:3161..3761Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22781 3162..3761 +
1691480944.7082415-CDS-H-paniculata_contig22781:3161..37611691480944.7082415-CDS-H-paniculata_contig22781:3161..3761Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22781 3162..3761 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22781.6071.1

>prot_H-paniculata_contig22781.6071.1 ID=prot_H-paniculata_contig22781.6071.1|Name=mRNA_H-paniculata_contig22781.6071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=200bp
MVGSLMYASTGTRPDIAYAVHQAARRMEDPCPDDFSTCKRIFRYLSTVPD
LGITFDRKSNGHGLEGFVDADWAEDVEDRKSTTAYVFKLNGGAISWCSRK
QQLVTWFRTEPEYLAAGEAVKETVYLRELLGSIGFGCRGSTTLFDDNISA
INLSKGSRAHCRTKHIGVRWQGIREWIWEGILALKYVQTGDQLADILTK*
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mRNA from alignment at H-paniculata_contig22781:1103..3761+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22781.6071.1 ID=mRNA_H-paniculata_contig22781.6071.1|Name=mRNA_H-paniculata_contig22781.6071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2659bp|location=Sequence derived from alignment at H-paniculata_contig22781:1103..3761+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCTATACCTTGCGACAAAAGTCGGAGGCGCTATGGGCCCTGAAGCAATT CGAGAGGGACGTAGCGAGGGCAAACGGTTTGCGGGTTAAGCGCCTTCGGT CGGATCAGGGAGGAGAATATACTGGGAAGCCATTTAGCCAATTCTACGCG GAAAATGGCATCAAGCAGGAGTTCTCTGCCGCCTACACACCGCAACAAAA CGGTGTGGCGGAGCATAGCTGGCGCAGCTTTTCGAGATGGCAAGAGCCAG CATGATCACCGCCAACATGGCTCGTAGATGTTGGGCGGAAGCGCTGCGCT CGGCGGTGTACTGCCTAAATCGTGCCCCGACGCGACCACACAACGGAGGA ACGCCGTATGAAAAATGGCACGGCGAGACACCAAAGTTTGACCACCTTCG CGTCTTCGGCTGCACGGCGTATGGTATGTCTTAGTCGCAACAGAGACACA AGCTCGACGACAAAGCATGGGCGGGGGTGTTTTTGGCGTACGACGAGGAC AGCCCGAATTATCGAATATATAACCCGGAAAACAAGAGCGCCCAGTTGAG CAGGAATGTGAGATTTGAGGAAGAGGACTTCGTAACGGGTCATCGCGGAC AGCAGGAGCACGACGGAACGCGCAACATAGAAGATTTGTTTTCAACACCG CCAGTCACGCCAGCGGTCACTCGATCCCGCGCCCAAGGCGAGCAAGGAAG CGGAACTAACACGGAAGACCGGACGTCGGCGTCACAAATGCCACCGGTAT TACCAACACATTTGCTGCCAGCCACCAGCGCAAATCCATTCAGTGCCTTG AGCAATGACGATGATGGCAAAAGTAACGGTGACTCCAAGATGAAGGATGC GGAGCCTGCAGTCGAAGACGCACCATCAGCACGGACAGCTGCACCCGCGT CGTGGGGGAACACCACGAAGCAGTCGGGGACGGAGGCGCGGCGTCCGCGA GATCGGTCACCAATACGAACATGGGCGAGAGCGAGGAAAAGCCGCGAAGA AGATCCAGGCGCTACCACGCGCGTGGAAAAAGTGAAAAGCACTGGCAACC TTACAGAAGCGGTATCTAAGAGGGAGCCGAAATCCGCGGCAGAACCACTA AAGGGCCCAAAGGCGGAAAAATGGCACGCGGCAATGGAGGAAGAATGGAG GGCGTTGGTGGACAATGGAACATGGAAAAGCGAAGGCCTGGGGAGGTTAC CGGCAGGGCGGAAGGCGGTTCGCACGAAATAAATTTTCAAGCGAAAACTG AAGGAGGACGGCAGCGTGGCATGCTACCAAGCGCGACTGGTGGCTCAAGG TCTTTCACAGGTGGAGGGTGAAGATTTGTTTGAAACCAGTGCCCCCGTAG CTCGCATGTCGACGTTACGCACTGCTTTTAGCCTGACCGCCGAACACGAT TTCGAATTAAAAGGCATGGACGTAAATGCGGTGTATTTGAACGCCCCGGT AGAAGAAGAGCTGCTCGTTAAGCTACCCCCCGAGTTTTCCTCTTTCTCCC GAGACATACCGTTTGTGCGCCGCCTGCGTGAAAGCCTGTACGGCCTCAGG CAGAGCGGCCGAAACTGGAATAACACTCTTGACGATTTTCTTGTTGGGAT AGGACCCGACCATTCCACCACCGTTTCATGCTTGTACTCTTCCCGCGACG AAGGGGGAGAGACAAACCTTCTGGTGGCCGTCTATGTTGACGACCTGGTC ATTGCTGGCCGTCGTGAGAAAGTAGACGAGTTCAAGCATAACATAAGTCA GCGTTTTAGGATGAAAGACTTGGACTCTCTCTCTCACGCGTGTTGGGAAT AGAAGTACGATGTGACCGCCCTAATGGTATCATAACCATCTCGCAGTGTA GTTACATCCGCGAGGTACTAAAAAGATACGGTTTTGACGAGTGTCGAGGA GTACCCACCACTGCAGAGGGAAAAGTGGAGATTTCGGCACCCGAGTCGGC CGACAAGCCCTCCGAACAGAAGTCACTTGAAGCTGTACTGGCGGACATAG GCGCAGAAGTAAAAGAAAGCAGCAGAAGGAGAAGTTGCAATTGATCTGAA TACAGAGGCATGGTAGGATCACTCATGTACGCCTCGACAGGAACTAGACC TGATATAGCATATGCGGTACACCAAGCAGCACGTCGTATGGAGGACCCGT GTCCGGATGACTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTACT GTGCCTGACCTCGGCATTACGTTCGACCGTAAGAGTAATGGTCATGGTCT GGAAGGATTCGTTGATGCCGATTGGGCGGAAGATGTCGAGGACCGAAAGT CCACAACCGCATACGTTTTCAAGCTGAACGGTGGTGCAATAAGTTGGTGC TCTAGAAAGCAACAGTTAGTCACGTGGTTCAGAACAGAGCCAGAGTACCT TGCTGCAGGAGAAGCGGTAAAGGAGACGGTATATCTTAGGGAGTTACTAG GATCGATAGGTTTCGGATGCAGGGGGAGCACGACATTGTTTGACGACAAT ATATCAGCTATTAATCTCAGTAAGGGATCTCGCGCACACTGCAGGACAAA GCACATCGGAGTGCGCTGGCAGGGAATTCGAGAGTGGATTTGGGAAGGAA TATTGGCATTGAAATACGTACAGACCGGCGATCAACTTGCTGACATTTTA ACGAAATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig22781:1103..3761+

>mRNA_H-paniculata_contig22781.6071.1 ID=mRNA_H-paniculata_contig22781.6071.1|Name=mRNA_H-paniculata_contig22781.6071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1200bp|location=Sequence derived from alignment at H-paniculata_contig22781:1103..3761+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTAGGATCACTCATGTACGCCTCGACAGGAACTAGACCTGATATAGC
ATATGCGGTACACCAAGCAGCACGTCGTATGGAGGACCCGTGTCCGGATG
ACTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTACTGTGCCTGAC
CTCGGCATTACGTTCGACCGTAAGAGTAATGGTCATGGTCTGGAAGGATT
CGTTGATGCCGATTGGGCGGAAGATGTCGAGGACCGAAAGTCCACAACCG
CATACGTTTTCAAGCTGAACGGTGGTGCAATAAGTTGGTGCTCTAGAAAG
CAACAGTTAGTCACGTGGTTCAGAACAGAGCCAGAGTACCTTGCTGCAGG
AGAAGCGGTAAAGGAGACGGTATATCTTAGGGAGTTACTAGGATCGATAG
GTTTCGGATGCAGGGGGAGCACGACATTGTTTGACGACAATATATCAGCT
ATTAATCTCAGTAAGGGATCTCGCGCACACTGCAGGACAAAGCACATCGG
AGTGCGCTGGCAGGGAATTCGAGAGTGGATTTGGGAAGGAATATTGGCAT
TGAAATACGTACAGACCGGCGATCAACTTGCTGACATTTTAACGAAATGA
ATGGTAGGATCACTCATGTACGCCTCGACAGGAACTAGACCTGATATAGC
ATATGCGGTACACCAAGCAGCACGTCGTATGGAGGACCCGTGTCCGGATG
ACTTCAGTACATGCAAGCGCATTTTTCGTTATCTCAGTACTGTGCCTGAC
CTCGGCATTACGTTCGACCGTAAGAGTAATGGTCATGGTCTGGAAGGATT
CGTTGATGCCGATTGGGCGGAAGATGTCGAGGACCGAAAGTCCACAACCG
CATACGTTTTCAAGCTGAACGGTGGTGCAATAAGTTGGTGCTCTAGAAAG
CAACAGTTAGTCACGTGGTTCAGAACAGAGCCAGAGTACCTTGCTGCAGG
AGAAGCGGTAAAGGAGACGGTATATCTTAGGGAGTTACTAGGATCGATAG
GTTTCGGATGCAGGGGGAGCACGACATTGTTTGACGACAATATATCAGCT
ATTAATCTCAGTAAGGGATCTCGCGCACACTGCAGGACAAAGCACATCGG
AGTGCGCTGGCAGGGAATTCGAGAGTGGATTTGGGAAGGAATATTGGCAT
TGAAATACGTACAGACCGGCGATCAACTTGCTGACATTTTAACGAAATGA
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