mRNA_H-paniculata_contig2277.6065.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Match: A0A6H5KNZ1_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNZ1_9PHAE) HSP 1 Score: 601 bits (1549), Expect = 1.070e-202 Identity = 322/539 (59.74%), Postives = 415/539 (76.99%), Query Frame = 1
Query: 1 VNVKESAVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVLSLLKEFPNLAPVVAVTKIDRPGVDAKEATDRISRELMHHDVMTEEYGGEVPIVPVSAVTQKGFDDLLEILLLQAEIMELRADAKAPGEGVVVESSVVKGRGIVTDMLVSWGKLKVGDIVLSGMEFGKVKSMTGSDGSTLKEAETAEPVRVIGFKGLPKMGDDVVVVESEEQARTIIGERERERQRAQMEDQGEFIAAKRAKEEAAQAIKMEAKNAVRRREKAIYDARIALGLSKEKPDDEKAKRTAEAARVRAEDCIVQATAAEARAKNPYEEVDEGGPKSCNAVFKAEGFGMLEAMTQVLDGVPQDEVKLNVIRSGVGPVTQSDVDAAATAGAPIFAFNVGVERPDVKNMAKRNGVQLFTHKVIYRFLDDVKVLMSDLLPPDMKETLMGEGGILEVFDTKGKQGERVYIAGTNVTSGKLTRTHLFRVIRDGQVLKDGLKVSSMRRFKDRVNE-----ECGLALDGFADLQEGDLIQCYSLNEVKRSL 1602
V VK+S+VTFFDTPGHAAFKSMRH+TSRLTDIV+VVIAADDGVK+QT+EV LLKEFPNLAPVVAVTKID+ VD ++A DRISR+L+ H + TE YGGEVPIVPVSAVT++GFDDLLE LLLQAE++ELRAD KA EG+VV+S++VKG+G V D+LV+WGKLK D+V++G E+GKV+ + GSDG +KEA AEPVR++G KGLPKMGD+VVVV SE +AR ++ +R ++++ ++E Q E + +KR E+A + +K A A+RRRE+A+YDAR A + K + D E +K A+AA A + A A R++ E+ D GP C A+FKAEGFGMLEAM+QV+ VPQDEV+L+++++G+G VTQSDV+AAA A A IF FNVG DVK A++ GVQ+ +H VIYRFLDDVK +MS LLPP +ET++GE L+VF+T GK E V +AG V+SGKL+RTH FRVIRD +V+ D K +SMRR KDRVNE ECG+AL+ F +EGD++QCYSL E+KR+L
Sbjct: 490 VEVKDSSVTFFDTPGHAAFKSMRHATSRLTDIVVVVIAADDGVKSQTVEVFDLLKEFPNLAPVVAVTKIDQYDVDKEKAVDRISRQLLEHSITTEGYGGEVPIVPVSAVTREGFDDLLETLLLQAEVLELRADNKAAAEGLVVDSAIVKGQGGVADVLVTWGKLKPKDVVVAGTEYGKVRGLIGSDGRRIKEAGAAEPVRIVGMKGLPKMGDEVVVVASESEARAVVAQRIKQQEVKELEKQAEKLGSKRLSEQATKRLKDMAAAAIRRREEALYDAREAARVMKSRRD-ESSKAAAKAAEEFAARAMSYAEEAIRRSEAQDEDQD-AGPTKCFAIFKAEGFGMLEAMSQVMTEVPQDEVELSLLKTGLGSVTQSDVEAAALAQASIFTFNVGGVPADVKAKAQKEGVQIHSHDVIYRFLDDVKAVMSSLLPPGFQETVIGEAKTLQVFETTGKNKETVSVAGLAVSSGKLSRTHFFRVIRDDEVVADRAKAASMRRHKDRVNEVTKDKECGVALEDFDAFKEGDVVQCYSLEEIKRTL 1026
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Match: A0A7S2LMT8_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LMT8_9STRA) HSP 1 Score: 316 bits (810), Expect = 1.370e-94 Identity = 202/564 (35.82%), Postives = 300/564 (53.19%), Query Frame = 1
Query: 4 NVKESAVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVLSLLKEFPNLAP-----VVAVTKIDRPGVDAKEATDRISRELMHHDVMTEEYG-----GEVPIVPVSAVTQKGFDDLLEILLLQAEIMELRADAKAPGEGVVVESSVVKGRGIVTDMLVSWGKLKVGDIVLSGMEFGKVKSMTGSDGSTLKEAETAEPVRVIGFKGLPKMGDDVVVVESEEQARTIIGERERERQRAQMEDQGEFIAAKRAKEEAAQAIKMEAKNAVRRREKAIYDARIALGLSKEKPDDEKAKRTAEAARVRAEDCIVQATAAEARAKNPY----EEVDEGGPKSCNAVFKAEGFGMLEAMTQVLDGVPQD---EVKLNVIRSGVGPVTQSDVDAAATAGAPIFAFN-VGVERPDVKNMAKRNGVQLFTHKVIYRFLDDVKVLMSDLLPPDMKETLMGEGGILEVFDTKGKQGERVYIAGTNVTSGKLTRTH---------LFRVIRDGQVLK--DGLKVSSMRRFKDRVN-----EECGLALDGFADLQEGDLIQCYSLNEVK 1593
N S VTF DTPGHAAFK MR S S TD++++V+AADDG+ QT+E++ + K P V+AV+KID+PG+D EA RI +L+ HD+ TE G G + PVS +T G DDL+E L LQ+E+M+LRAD A GEG+V+++ + KG G+V D ++ WGK++ GD V+SG G+VK + S LK+ ++PVR++GFK LPK GD +V SE++A+ II RE E + E+A ++ + L + T AA+ + ++Q RA+ Y E+ ++ G V KA+ G LEA+ L + D ++ ++ + G VT SDV A + A IF F VG+ + KN+A+ V + H +IYR L+D K + + LP + + G+ + VF+ K V +AG V G L + +RV+R+G V++ D LK SS+RR K+ V+ EECGL LDGF +L+EGD+I+CYS+ E +
Sbjct: 367 NSPVSTVTFLDTPGHAAFKKMRQSGSSATDVIVLVVAADDGISPQTVEIIDMYKAIARSQPQSISLVIAVSKIDKPGIDIDEAVTRIENQLIEHDIFTENIGDEGEFGTCQLFPVSGITGDGLDDLIEGLALQSEMMDLRADDDAKGEGIVIDARMEKGLGVVADCVIRWGKVERGDFVVSGTTGGRVKFLNDVANSPLKKGRPSQPVRIVGFKSLPKAGDPIVCASSEDEAKEIIRLRESE---------------------------------LNNEERADFENDVELQV------------TGTAAK---QGLMLQ------RAQEKYGFDGEDDEDAGTIRIPVVIKADSHGALEAVRDALVSIGTDSKLDIIIDPVEMSTGVVTTSDVRMARESDAAIFCFGKVGIADRETKNLAETEEVSIRNHLIIYRLLEDAKDVFAGHLPVEYTTRVHGKANVQAVFEVTDKNKASVSVAGLRVMDGNLFKAKSIGEKPLLCFYRVLRNGDVVEGSDKLKSSSLRRVKEDVDSVKRGEECGLQLDGFNELEEGDVIECYSIEEKR 876
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Match: A0A0Q7TK22_9HYPH (Translation initiation factor IF-2 n=3 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A0Q7TK22_9HYPH) HSP 1 Score: 315 bits (808), Expect = 1.490e-94 Identity = 198/532 (37.22%), Postives = 290/532 (54.51%), Query Frame = 1
Query: 22 VTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVLSLLKEFPNLAPVVAVTKIDRPGVDAKEATDRISRELMHHDVMTEEYGGEVPIVPVSAVTQKGFDDLLEILLLQAEIMELRADAKAPGEGVVVESSVVKGRGIVTDMLVSWGKLKVGDIVLSGMEFGKVKSMTGSDGSTLKEAETAEPVRVIGFKGLPKMGDDVVVVESEEQARTIIGERERERQRAQMEDQGEFIAAKRAKEEAAQAIKMEAKNAVRRREKAIYDARIALGLSKEKPDDEKAKRTAEAARVRAEDCIVQATAAEARAKNPYEEVDEGGPKSCNAVFKAEGFGMLEAMTQVLDGVPQDEVKLNVIRSGVGPVTQSDVDAAATAGAPIFAFNVGVERPDVKNMAKRNGVQLFTHKVIYRFLDDVKVLMSDLLPPDMKETLMGEGGILEVFDTKGKQGERVYIAGTNVTSGKLTRTHLFRVIRDGQVLKDGLKVSSMRRFKDRVNE-----ECGLALDGFADLQEGDLIQCYSLNEVKRSL 1602
VTF DTPGHAAF +MR +++TDIV++V+AADDGV QT+E + K + +VA+ KID+PG DR+ EL+ H++ E GG+V V VSA + D LLE++ LQAEI++L+AD P EG V+E+ + +GRG V +LV G LK+GD+V++G E+G+V+++ G+ ++ A + PV V+GF G P GD + VVE+E +AR I R+R+++ EK+ A R E + QA A G K V KA+ G LEA+ LD + DEV V+ SGVG +++SDV A +G PI AFNV + + + A+R G+++ + +IY +DDVK MS LLPP ++ET++G ILEVF K G IAG VT G + R R+IRD V+ +G K+S ++RFKD V E ECG+A + + D+++GD+I+CY + ++RSL
Sbjct: 398 VTFIDTPGHAAFTAMRARGAKVTDIVILVVAADDGVMPQTIEAIHHAKAA-KVPIIVAINKIDKPGA----TPDRVRTELLQHEIQVESLGGDVVDVEVSATKKTNIDKLLEMIALQAEILDLKADPGRPAEGTVIEAKLDRGRGPVATVLVQRGTLKIGDLVVAGAEWGRVRALVSDTGAAVQTAGPSTPVEVLGFSGTPDAGDRLAVVENEARAREITDYRQRQKR-------------------------------------------------------EKSSARATGMRGSLEQMMAQAKTA--------------GRKEFALVIKADVQGSLEAIAGALDKLGTDEVGARVLHSGVGGISESDVTLAEASGVPIIAFNVRANK-EAREAAERAGIEIRYYNIIYDLIDDVKKAMSGLLPPTLRETMLGNALILEVFKVS-KVGN---IAGCRVTDGNVERGASVRLIRDNVVVHEG-KLSQLKRFKDDVKEVTAGQECGMAFENYQDMRQGDVIECYRVETIQRSL 849
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Match: A0A0S3QRL4_THET7 (Translation initiation factor IF-2 n=1 Tax=Thermosulfidibacter takaii (strain DSM 17441 / JCM 13301 / NBRC 103674 / ABI70S6) TaxID=1298851 RepID=A0A0S3QRL4_THET7) HSP 1 Score: 313 bits (802), Expect = 3.850e-94 Identity = 201/541 (37.15%), Postives = 307/541 (56.75%), Query Frame = 1
Query: 1 VNVKESAVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVLSLLKEFPNLAPVVAVTKIDRPGVDAKEATDRISRELMHHDVMTEEYGGEVPIVPVSAVTQKGFDDLLEILLLQAEIMELRADAKAPGEGVVVESSVVKGRGIVTDMLVSWGKLKVGDIVLSGMEFGKVKSMTGSDGSTLKEAETAEPVRVIGFKGLPKMGDDVVVVESEEQARTIIGERERERQRAQMEDQGEFIAAKRAKEEAAQAIKMEAKNAVRRREKAIYDARIALGLSKEKPDDEKAKRTAEAARVRAEDCIVQATAAEARAKNPYEEVDEGGPKSCNAVFKAEGFGMLEAMTQVLDGVPQDEVKLNVIRSGVGPVTQSDVDAAATAGAPIFAFNVGVERPD--VKNMAKRNGVQLFTHKVIYRFLDDVKVLMSDLLPPDMKETLMGEGGILEVFDTKGKQGERVYIAGTNVTSGKLTRTHLFRVIRDGQVLKDGLKVSSMRRFKDRVNE-----ECGLALDGFADLQEGDLIQCYSLNEVKRSL 1602
V + E +TF DTPGH AF +MR +R+TDIV++V+AADDGV QT+E ++ K + +VA+ KID+P + +R+ +EL + ++ EE+GG+ +VP+SA T +G D+LLE++LLQAE++EL+A+ P G V+ES + RG V +LV G L+VGD +++G+ +GKV++MT G LKEA + PV V+G +P G+ VV++E +AR I ER KE A +A++ EKP R+ E+ + + T EG K V KA+ G LEA+ + ++ + DEV + VI SGVG +T++DV A +GA I FNV RPD K +A+++ V++ T++VIY LDDVK M+ +L P+ +E ++G + +VF+ K G+ +AG V GK+TR RV+RDG ++ +G K+SS++RFKD V E ECG+A++GF D++EGD+I+ Y + EV+R L
Sbjct: 342 VKLPEGEITFIDTPGHHAFTTMRARGARVTDIVILVVAADDGVMPQTVEAINHAKAA-GVPIIVAINKIDKPEANP----ERVKQELSKYGLIPEEWGGDTIMVPISAKTGQGVDELLEMVLLQAEMLELKANPNKPARGTVLESKLDPKRGPVATLLVQDGTLRVGDALVAGLHWGKVRAMTNELGQRLKEAGPSTPVEVLGLSDVPLAGEPFFVVDNERKAREISEER---------------------KERAKEALQ-------------------------EKP------------RLSLEEIMKKLT--------------EGEAKELRIVLKADVQGSLEAVKEAIEKLSNDEVSVKVIHSGVGAITETDVMLAEASGAIIIGFNV---RPDSKAKKLAEQDKVEIRTYRVIYELLDDVKKAMAGMLEPEYQEVVLGRAEVRQVFNVP-KVGK---VAGCYVLEGKITRNANIRVLRDGVIIHEG-KLSSLKRFKDDVREVAAGYECGMAIEGFNDVKEGDIIEAYEVQEVQREL 797
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Match: A0A3C0MIA7_9PROT (Translation initiation factor IF-2 (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0MIA7_9PROT) HSP 1 Score: 302 bits (774), Expect = 1.440e-93 Identity = 185/532 (34.77%), Postives = 295/532 (55.45%), Query Frame = 1
Query: 22 VTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVLSLLKEFPNLAPVVAVTKIDRPGVDAKEATDRISRELMHHDVMTEEYGGEVPIVPVSAVTQKGFDDLLEILLLQAEIMELRADAKAPGEGVVVESSVVKGRGIVTDMLVSWGKLKVGDIVLSGMEFGKVKSMTGSDGSTLKEAETAEPVRVIGFKGLPKMGDDVVVVESEEQARTIIGERERERQRAQMEDQGEFIAAKRAKEEAAQAIKMEAKNAVRRREKAIYDARIALGLSKEKPDDEKAKRTAEAARVRAEDCIVQATAAEARAKNPYEEVDEGGPKSCNAVFKAEGFGMLEAMTQVLDGVPQDEVKLNVIRSGVGPVTQSDVDAAATAGAPIFAFNVGVERPDVKNMAKRNGVQLFTHKVIYRFLDDVKVLMSDLLPPDMKETLMGEGGILEVFDTKGKQGERVYIAGTNVTSGKLTRTHLFRVIRDGQVLKDGLKVSSMRRFKDRVNE-----ECGLALDGFADLQEGDLIQCYSLNEVKRSL 1602
+TF DTPGHAAF +MR +++TDIV++V+AADDGV QT+E ++ K + +VAV KID+P D +R+ +L+ H+++ E+ GGE V VSA+ + G D L E +LLQAEI+EL+A++ G VVE+ + +GRG V+ +LV G L+VGDIV++G E+G+V+++ G + A + PV ++G P GD+ VV++E +AR + R R+++ A+ + +A D +AL ++G K + V K++ G +EA+ L+ + EV++ V+ SGVG +TQSDV A + API AFNV + +++AKR+GV++ + +IY +DD++ MS +L P ++E +G ILEVF+ K G+ +AG VT GK+ R + R++RD V+ +G +++++RFKD V E ECG+A + + DLQ+GDLI+C+ + EV+RSL
Sbjct: 22 ITFLDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAA-RVPIIVAVNKIDKPSADP----NRVKTDLLQHEIVVEDMGGETQAVEVSALKRTGLDKLQEAILLQAEILELKANSNRAATGAVVEAKLDRGRGPVSTVLVQRGTLRVGDIVVAGAEWGRVRALVNDRGEQTESAGPSVPVEILGLSAPPDAGDEFSVVDTEARAREVADFRARKKKEARTKSSA----------------------------RASLDQAMALR-------------------------------------------EQGEAKVLSLVIKSDVQGSVEAIVAALNQLSTPEVRVQVLHSGVGGITQSDVILARASDAPIIAFNVRATA-EARDIAKRDGVEIRYYSIIYNIIDDIRAAMSGMLAPTLRENFLGYAEILEVFNIS-KVGK---VAGCRVTDGKVLRGNKVRLLRDNVVIHEG-SLATLKRFKDEVKEVVAGQECGMAFESYHDLQKGDLIECFEVEEVQRSL 471
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Match: A0A1V9ZN94_9STRA (Translation initiation factor IF-2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZN94_9STRA) HSP 1 Score: 313 bits (801), Expect = 1.590e-93 Identity = 195/534 (36.52%), Postives = 306/534 (57.30%), Query Frame = 1
Query: 22 VTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVLSLLKEFPNLAPVVAVTKIDRPGVDAKEATDRISRELMHHDVMTEEYGGEVPIVPVSAVTQKGFDDLLEILLLQAEIMELRADAKAPGEGVVVESSVVKGRGIVTDMLVSWGKLKVGDIVLSGMEFGKVKSMTGSDGSTLKEAETAEPVRVIGFKGLPKMGDDVVVVESEEQARTIIGERERERQRAQMEDQGEFIAAKRAKEEAAQAIKMEAKNAVRRREKAIYDARIALGLSKEKPDDEKAKRTAEAARVRAEDCIVQATAAEARAKNPYEEVDEGGPKSCNAVFKAEGFGMLEAMTQVLDGVPQ--DEVKLNVIRSGVGPVTQSDVDAAATAGAPIFAFNVGVERPDVKNMAKRNGVQLFTHKVIYRFLDDVKVLMSDLLPPDMKETLMGEGGILEVFDTKGKQGERVYIAGTNVTSGKLTRTHLFRVIRDGQVLKDGLKVSSMRRFKDRVNE-----ECGLALDGFADLQEGDLIQCYSLNEVKRSL 1602
+TFFDTPGHAAF +MR LTDI++VV+AADDG++ QT EVL L +E +L +VA+TK DR + E +RI+ EL + + + +V VS T +G D+L + ++LQAE+M+LRAD KA GEGVVVE+++V+G G DM+V+WG +KVG V+ G+E+GK+KS+ +G ++KEA + PVR++G K LPK GD ++ V++EE+A+ +I ER R +++ QM KE AA + + + + RR+KA R +E+ +EK R +N E ++ K + K G+++A+ ++ + +E +L I GVGPVT SD+D AA AGA IF FN K+ A+R + + TH V+Y +DD++ +++ + P +++ ++G IL+V K +V IAG+ VT G L +RV+R GQV+ + K+ SM ++++++E ECGL + Q+GD++Q Y N+V L
Sbjct: 360 ITFFDTPGHAAFATMRSQGCHLTDILVVVVAADDGIRPQTKEVLELAQEH-DLPIIVAITKCDRYPDEEDEVIERITEELELNGIEAH----DTQLVCVSGKTGQGLDELKQAIILQAELMDLRADTKASGEGVVVEATIVRGWGTTVDMMVTWGTVKVGQYVVCGLEYGKIKSLVDQNGKSVKEATPSTPVRMVGLKELPKTGDSILPVDTEERAKEVISERARIQEQIQM------------KEIAANSPEKKEHIPIARRQKA----RQLEFKRQERALEEK------------------------RLENLTMEDEDYVKKIVPIILKTNSLGVIDAIDTLIKELNDINEECELKRIHGGVGPVTSSDLDLAARAGATIFTFNTRSPNSIDKD-AQRKKIDIRTHNVVYSLVDDIESVVTQQMTPVLEDQVLGSAEILQVISINTKGRSKVNIAGSRVTDGSLFLDCSYRVLRQGQVIAEDSKLESMHHYQEKISESTKGQECGLQFTQDINFQQGDVLQAYKTNKVPPKL 847
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Match: A0A7S1FUM3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUM3_9STRA) HSP 1 Score: 311 bits (796), Expect = 3.570e-93 Identity = 208/545 (38.17%), Postives = 306/545 (56.15%), Query Frame = 1
Query: 10 KESAVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVLSLLKEFPNLAPVVAVTKIDRPGVDAKEATDRISRELMHHDVMTEEYGGEVPIVPVSAVTQKGFDDLLEILLLQAEIMELRADAKAPGEGVVVESSVVKGRGIVTDMLVSWGKLKVGDIVLSGMEFGKVKSMTGSDGSTLKEAETAEPVRVIGFKGLPKMGDDVVVVESEEQARTIIGERERERQRAQMEDQGEFIAAKRAKEEAAQAIKMEAKNAVRRREKAIYDARIALGLSKEKPDDEKAKRTAEAARVRAEDCIVQATAAEARAKNPYEEVDEGGPKSCNAVFKAEGFGMLEAMTQVLDGVPQD---EVKLNVIRSGVGPVTQSDVDAAATAGAPIFAFNVGVERPDVKNMAKRNGVQLFTHKVIYRFLDDVKVLMSDLLPPDMKETLMGEGGILEVFDT------KGKQGERVYIAGTNVTSGKL--------TRTHLFRVIRDGQVLKDGLKVSSMRRFKDRVNE-----ECGLALDGFADLQEGDLIQCYS 1578
+ +A+T DTPGHAAFK+MR TD++++VIAADDGV AQT E++ + +E A VVA+TK+DR VD +EA +RI ELM V+ EE GG+V +VPVS VT +G DDL+E LLLQAE+M+LRAD GE VV+++ KG G+V D +V WG ++ GD ++G+ GK++ + G DG LKEA + PVR+IG K LP+ GDD+ V +E++AR I +R+ + ++ AA+ A A A+++ A K + A + ++A+ + R+RA V +++ G L A+ + L V ++ ++ ++V+ GVGPVT SDV A+ A A IFAF V V A+R GV++ H VIY LDD + +++ LPP M E + G + VF+ KGK E IAG V SG L T T+ +RVIR G+++ + +K S+R+FKD V E ECG+ L GF++ +EGD+I+C+S
Sbjct: 298 ENNAITILDTPGHAAFKAMRAHGGIATDVIVMVIAADDGVAAQTHEIIEMAREGGQ-AMVVALTKVDREDVDVEEARNRIINELMTAGVLCEEVGGDVQVVPVSGVTGEGLDDLVERLLLQAEVMDLRADGTGTGEAVVIDARQEKGLGVVADCIVRWGTVRPGDAFVTGVIGGKIRILNGVDGKPLKEATPSTPVRIIGLKSLPRAGDDLFCVANEKKARDIA-----DRRSIRHTEELTRHAARAAAVAPAPALQITGTAA-----KNTFMTNTARTKYNKLHGMDQAETEEKIDRIRAP-----------------------------VVLRSDAEGTLAAVRESLMAVAEESSHDIDVDVVSLGVGPVTASDVLLASEADAAIFAFGVRAGDQSVTRSAEREGVRIRHHTVIYSLLDDARKILARHLPPVMVERVAGRANVQAVFEMNVNGTKKGKMAEM--IAGCRVESGSLFLDKDGNGTLTN-YRVIRKGEIICEEVKAMSIRKFKDEVIEAKNGDECGVGLKGFSEFKEGDIIECFS 799
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Match: A0A1H2IQX4_9HYPH (Translation initiation factor IF-2 n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H2IQX4_9HYPH) HSP 1 Score: 311 bits (797), Expect = 1.390e-92 Identity = 191/539 (35.44%), Postives = 297/539 (55.10%), Query Frame = 1
Query: 1 VNVKESAVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVLSLLKEFPNLAPVVAVTKIDRPGVDAKEATDRISRELMHHDVMTEEYGGEVPIVPVSAVTQKGFDDLLEILLLQAEIMELRADAKAPGEGVVVESSVVKGRGIVTDMLVSWGKLKVGDIVLSGMEFGKVKSMTGSDGSTLKEAETAEPVRVIGFKGLPKMGDDVVVVESEEQARTIIGERERERQRAQMEDQGEFIAAKRAKEEAAQAIKMEAKNAVRRREKAIYDARIALGLSKEKPDDEKAKRTAEAARVRAEDCIVQATAAEARAKNPYEEVDEGGPKSCNAVFKAEGFGMLEAMTQVLDGVPQDEVKLNVIRSGVGPVTQSDVDAAATAGAPIFAFNVGVERPDVKNMAKRNGVQLFTHKVIYRFLDDVKVLMSDLLPPDMKETLMGEGGILEVFDTKGKQGERVYIAGTNVTSGKLTRTHLFRVIRDGQVLKDGLKVSSMRRFKDRVN-----EECGLALDGFADLQEGDLIQCYSLNEVKRSL 1602
V + + +TF DTPGHAAF MR ++ TDIV++V+AADDGV QT E ++ K N+ +VA+ K+D+P D + R+ EL+ +++ E GG+V V VSA+ + D LLE++LLQ+E++EL+A+ EG+V+E+ + KGRG V +LV G LKVGDI+++G E+G+V++M + +KEA ++PV V+GF+G P+ GD V VVE+E +AR I+ R+R++ REKA V AT + + + E G + + K + G +EA+ LD + DEVK ++ +GVG +T+SDV AA +GAPI FNV + ++ A+R G+++ + +IY +DDVK MS LL P+ +ET +G ILE+F+ K G+ +AG VT G + R R+IRD V+ +G K+ +++RFKD V +ECG+ + + D++ GD+I+CY + EV R+L
Sbjct: 436 VELDGNKITFIDTPGHAAFTQMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAA-NVPIIVAINKMDKPSADPQ----RVRTELLQDEIVVESMGGDVIEVEVSALKEMNLDKLLEMILLQSEVLELKANPNRTAEGIVIEAQLDKGRGPVATVLVQKGTLKVGDILVAGSEWGRVRAMLDEESQQVKEAGPSKPVEVLGFQGTPEAGDMVAVVENEARAREIVEYRQRQK-----------------------------------REKAS----------------------------------VVATGSRGSLEQMMNRLQESGHQEFPLLIKGDVQGSVEAIGGALDKLGTDEVKARILHAGVGGITESDVTLAAASGAPIIGFNVRANK-QARDAAEREGIEIRYYNIIYNLVDDVKAAMSGLLSPERRETFLGNAEILEIFNIT-KVGK---VAGCRVTEGTVERGAEVRLIRDDVVIHEG-KLGTLKRFKDEVKVVQSGQECGMNFENYQDMRPGDVIECYRVEEVARTL 894
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Match: U2WT08_9PROT (Translation initiation factor IF-2 n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=U2WT08_9PROT) HSP 1 Score: 309 bits (792), Expect = 2.140e-92 Identity = 201/532 (37.78%), Postives = 288/532 (54.14%), Query Frame = 1
Query: 22 VTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVLSLLKEFPNLAPVVAVTKIDRPGVDAKEATDRISRELMHHDVMTEEYGGEVPIVPVSAVTQKGFDDLLEILLLQAEIMELRADAKAPGEGVVVESSVVKGRGIVTDMLVSWGKLKVGDIVLSGMEFGKVKSMTGSDGSTLKEAETAEPVRVIGFKGLPKMGDDVVVVESEEQARTIIGERERERQRAQMEDQGEFIAAKRAKEEAAQAIKMEAKNAVRRREKAIYDARIALGLSKEKPDDEKAKRTAEAARVRAEDCIVQATAAEARAKNPYEEVDEGGPKSCNAVFKAEGFGMLEAMTQVLDGVPQDEVKLNVIRSGVGPVTQSDVDAAATAGAPIFAFNVGVERPDVKNMAKRNGVQLFTHKVIYRFLDDVKVLMSDLLPPDMKETLMGEGGILEVFDTKGKQGERVYIAGTNVTSGKLTRTHLFRVIRDGQVLKDGLKVSSMRRFKDRVNE-----ECGLALDGFADLQEGDLIQCYSLNEVKRSL 1602
VTF DTPGHAAF SMR +++TDIV++V+AADDGV QT+E +S K + VVAV KID+P D R+ EL+ H++++E+ GG+V V VSA+ G DDLLE +LLQAE+++L+A+ EG+V+ES + KGRG V +LV G L VGDI + G E G+V+++ G ++K A A PV V+G G P GD VVE+E +AR I A Y ARI+ + KRTA R + + Q E K V KA+ G EA++Q +D + DEV V+ + VG +T+SD+ AA + A I FNV +N+A GV++ + VIY +DD+K MS +L PD++ET++G ILE+F+ K G+ +AG VT G + R R+IRD V+ +G ++SS+RRFKD V E ECG+A + + DL++GD+I+CY + E+ R+L
Sbjct: 376 VTFIDTPGHAAFTSMRARGAKVTDIVILVVAADDGVMPQTVEAISHAKAA-EVPIVVAVNKIDKPEADPT----RVKNELLQHEIISEDMGGDVQFVEVSALAGTGLDDLLESVLLQAELLDLKANPYRAAEGIVIESKLEKGRGAVATVLVQRGTLSVGDIFVVGEESGRVRALLDDQGESIKSALPASPVEVLGAGGSPSAGDMFNVVETEAKAREI----------------------------------------------AEYRARIS-----------REKRTASGNRTTLDQMMQQLKDTEL--------------KELPIVVKADVQGSAEAISQAVDKLGTDEVCGRVVHTAVGGITESDITLAAASNASILGFNVRANS-QARNLADEQGVEIRYYNVIYDLVDDMKAAMSGMLSPDLRETMLGNAEILEIFNVS-KSGK---VAGCKVTDGLVRRGARVRLIRDSVVIHEG-ELSSLRRFKDEVKEVNAGQECGMAFENYEDLKQGDVIECYEVEEIARTL 825
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Match: A0A7Y8MSM2_9PROT (Translation initiation factor IF-2 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y8MSM2_9PROT) HSP 1 Score: 311 bits (796), Expect = 2.170e-92 Identity = 192/532 (36.09%), Postives = 296/532 (55.64%), Query Frame = 1
Query: 22 VTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVLSLLKEFPNLAPVVAVTKIDRPGVDAKEATDRISRELMHHDVMTEEYGGEVPIVPVSAVTQKGFDDLLEILLLQAEIMELRADAKAPGEGVVVESSVVKGRGIVTDMLVSWGKLKVGDIVLSGMEFGKVKSMTGSDGSTLKEAETAEPVRVIGFKGLPKMGDDVVVVESEEQARTIIGERERERQRAQMEDQGEFIAAKRAKEEAAQAIKMEAKNAVRRREKAIYDARIALGLSKEKPDDEKAKRTAEAARVRAEDCIVQATAAEARAKNPYEEVDEGGPKSCNAVFKAEGFGMLEAMTQVLDGVPQDEVKLNVIRSGVGPVTQSDVDAAATAGAPIFAFNVGVERPDVKNMAKRNGVQLFTHKVIYRFLDDVKVLMSDLLPPDMKETLMGEGGILEVFDTKGKQGERVYIAGTNVTSGKLTRTHLFRVIRDGQVLKDGLKVSSMRRFKDRVNE-----ECGLALDGFADLQEGDLIQCYSLNEVKRSL 1602
+TF DTPGHAAF +MR +++TDIV++V+AADDGV QT+E ++ K + +VAV KIDRP + + R+ EL+ H+++ E+ GG+ +V VSA+ + D L E +LLQAE+++L+A+ P +G V+E+ + KGRG V +LV G L+VGDIV++G E+G+V+++ G LKEA A PV ++G G+P+ GD++VVVE+E +AR + R R +RR ++A AR +L D +VQ EG K V K + G +EA+ L+ + EV V++ GVG +T+SDV A +GA I AFNV + + AKR+GV + + +IY +DDVK +S LL P ++ET +G ILE+F+ K G+ +AG VT G + R R+IRD V+ +G K+S+++RFKD V E ECG+A + + D+++GD+I+C+ + E++R+L
Sbjct: 452 ITFLDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAIAHAKAA-GVPLIVAVNKIDRPDANPQ----RVKSELLQHEIVVEDLGGDTQVVEVSAIKKTNLDKLEEAILLQAEVLDLKANPNRPADGAVIEAKLDKGRGPVATVLVQRGTLRVGDIVVAGTEWGRVRALQNERGEALKEAGPATPVEILGLTGVPEAGDELVVVEAESRAREVTEYRAR----------------------------------MRREKRAKAVARTSL------------------------DQLVQQK--------------EGERKVLPVVIKGDVQGSVEAIAGALNQLATGEVAAQVLQQGVGGITESDVTLAQASGAAIIAFNVRAHA-EARERAKRDGVDIRYYSIIYNIIDDVKAALSGLLSPTLRETFLGNAEILEIFNIS-KVGK---VAGCRVTEGVVRRGAKVRLIRDKIVIHEG-KLSTLKRFKDEVKEVQAGMECGMAFEDYQDMRQGDIIECFDVEEIQRTL 900 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2277.6065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2277.6065.1 >prot_H-paniculata_contig2277.6065.1 ID=prot_H-paniculata_contig2277.6065.1|Name=mRNA_H-paniculata_contig2277.6065.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=535bp VNVKESAVTFFDTPGHAAFKSMRHSTSRLTDIVLVVIAADDGVKAQTLEVback to top mRNA from alignment at H-paniculata_contig2277:555..16734+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2277.6065.1 ID=mRNA_H-paniculata_contig2277.6065.1|Name=mRNA_H-paniculata_contig2277.6065.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=16180bp|location=Sequence derived from alignment at H-paniculata_contig2277:555..16734+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2277:555..16734+ >mRNA_H-paniculata_contig2277.6065.1 ID=mRNA_H-paniculata_contig2277.6065.1|Name=mRNA_H-paniculata_contig2277.6065.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3210bp|location=Sequence derived from alignment at H-paniculata_contig2277:555..16734+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |