mRNA_H-paniculata_contig22733.6057.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.280e-37 Identity = 72/200 (36.00%), Postives = 118/200 (59.00%), Query Frame = 3
Query: 132 PVRKRLPKGVGLELAEKFGVGAQYPRQLWARVREKLDHCNTLWPRSASRSGRLSEFTPTKHVTIRKVSPTNRTLTLDQLSSKIAKVSFVAGSSQVQRWLKEMGVTSVKRRITSSLLLTHRKNRVDFIPDQAARNGINFRSGFQTIHIDEAWFYLIRDRDRVRILPEEERVASTKVQHKSHIPKVMFICAVSRPDLSRDFE 731
P R+PKGV + E++GVG +YP +LW RV+ ++D+ L + RSGR S TP+K ++ V+ NR+ TL Q+S ++ + G V+RW ++G RI SL +++R+DFI D+ + +H+DE+WFYL+R++++VR+ E+ +V H+SH+PK+M I A +RPD + DF+
Sbjct: 11 PGFSRIPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFD 210
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Match: UPI001C27814C (uncharacterized protein LOC121774357 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27814C) HSP 1 Score: 70.5 bits (171), Expect = 2.210e-10 Identity = 55/200 (27.50%), Postives = 95/200 (47.50%), Query Frame = 3
Query: 147 LPKGVGLELAEKFGVGAQYPRQLWARVREKLDHCNTLWPRSASRSGRLSEFTPTKHVTIRKVSPT-NRTL-TLDQLSSKIAKVSFVAGSSQVQRWLKEMGV----TSVKRRITSSLLLTHRKNRVDFIPDQAARNGINFRSGFQTIHIDEAWFYLIRDRDRVRILP-EEERVASTKVQHKSHIPKVMFICAVSRPDLSRD 725
L +G +E AE F + +LW +E++ A G++ + HV I ++ +R L TL++ S + V S + +W+K+ + ++K +T+ + + + + Q + + F+S +HIDE WFY+ + DR +LP E+E S K K +I K+MF+CAVSRP D
Sbjct: 32 LARGAVMETAETFSISRNTVYRLWKAAKEQMQRGEP-----AMMEGKVRGY---HHVDILELDQEKDRNLSTLERSSLRKMTVKLNVSKSTLGQWVKQGKLRPYTNAIKPALTNMNKIARSRWSLSQLQPQITQGRVQFQSMHNVVHIDENWFYMTKVSDRYYLLPNEDEPYRSCK--SKRYITKLMFMCAVSRPQFGMD 221
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Match: A0A1R3I5M9_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3I5M9_9ROSI) HSP 1 Score: 67.8 bits (164), Expect = 1.910e-9 Identity = 60/196 (30.61%), Postives = 88/196 (44.90%), Query Frame = 3
Query: 144 RLPKGVGLELAEKFGVGAQYPRQLWARVRE-------KLDHCNTLWPRSASRSGRLSEFTPTKHVTIRKVSPTNRTLTLDQLSSKIAKVSFVAGSSQVQRWLKEMGVTSVKRRITSSLLLTHRKNRVDFIPDQAARNGINFRSGFQTIHIDEAWFYLIRDRDRVRILPEEERVASTKVQHKSHIPKVMFICAVSRP 710
+L G LA FGV + ++LW R +E K +C R S + E ++ T+R ++ D L KI+K S + R LK + + +L ++ R+ F N F+ + TIHIDE WFYLIR +LP+EE T + K+ IPKVMF+ AV+RP
Sbjct: 45 KLKDGTKKMLASSFGVCTKSIQRLWKRAKETGNVYHMKTKNCGR--KRIQLDSDQFCEIPLSRRSTLRSMA--------DAL--KISK-------STLHRLLKIGAILRHSSPLRPNLTFENKIARLRFCLKMLESNDSTFKGMYDTIHIDEKWFYLIRKSVNYYLLPDEEEPHRT-CKSKNFIPKVMFLAAVARP 220
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Match: UPI001C26DEAA (uncharacterized protein LOC121803497 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C26DEAA) HSP 1 Score: 65.1 bits (157), Expect = 9.810e-9 Identity = 36/123 (29.27%), Postives = 65/123 (52.85%), Query Frame = 3
Query: 354 TLDQLSSKIAKVSFVAGSSQVQRWLKEMGV----TSVKRRITSSLLLTHRKNRVDFIPDQAARNGINFRSGFQTIHIDEAWFYLIRDRDRVRILPEEERVASTKVQHKSHIPKVMFICAVSRP 710
TL++ S + V S + +W+K+ + ++K +T+ + + + + Q + G+ F+ +HIDE WFY+ + DR +LP+E+ + + K +I KVMF+CAVSRP
Sbjct: 68 TLERSSLRKMAVKLNVSKSTLGQWVKQGKLRPHTNAIKPALTNMNKIARARWSLSQLQPQITQGGVQFQGMHNVVHIDEKWFYMTKVSDRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRP 189
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25) HSP 1 Score: 65.5 bits (158), Expect = 1.110e-8 Identity = 45/186 (24.19%), Postives = 88/186 (47.31%), Query Frame = 3
Query: 165 LELAEKFGVGAQYPRQLWARVREKLDHCNTLWPRSASRSGRLSEFTPTKHVTIRKVSPTNRTLTLDQLSSKIAKVSFVAGSSQVQRWLKEMGV----TSVKRRITSSLLLTHRKNRVDFIPDQAARNGINFRSGFQTIHIDEAWFYLIRDRDRVRILPEEERVASTKVQHKSHIPKVMFICAVSRP 710
+E AE + + +LW +E++ A G++ + + + + N + TL++ S + V S + +W+K+ + ++K +T+ + + + + Q + G+ F+ +HIDE WFY+ + DR +LP+E+ + + K +I KVMF+CAVSRP
Sbjct: 1 MEAAETHSISRKTVYRLWKAAKEQMQRGEP-----AMMEGKVRGYHHVDRLELDQDKVRNLS-TLERSSLRKMAVKLNVSKSTLGQWVKQGKLRPHTNAIKPALTNMNKIARARWSLSQLQPQITQGGVQFQGMHNVVHIDEKWFYMTKVSDRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRP 179
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Match: F0WV30_9STRA (Transposase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WV30_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.420e-8 Identity = 57/206 (27.67%), Postives = 89/206 (43.20%), Query Frame = 3
Query: 144 RLPKGVGLELAEKFGVGAQYPRQLWARV-REKLDH-----------CNTLWPRSASRSGRLSEFTPTKHVTIRKVSPTNRTLTLDQLSSKIAKVSFVAGSSQVQRWLKEMGVTSVKRRITSSLLLTHRKNRVDFIPD--QAARNGINFRSGFQTIHIDEAWFYLIRDRDRVRILPEEERVASTKVQHKSHIPKVMFICAVSRPDLS 719
RL G E +EK+ V ++W R ++ D CN R G E+ H I K+ +R D L S A ++ S+ +QR++K + + +L RV FI G F + +H+DE WF++ + + RV + P E +HKSHIPK+MF+CAV+RP ++
Sbjct: 67 RLQHGALKEASEKWNVNVHTVYRVWKRYCSQRADSATRGITFEGNACNI------GRKGVSEEYIKDLHERISKLKLEHR----DDLRSLSAALAIP--STTLQRYVKSKVLRVHTVTLKPTLSEDQNAERVRFISSFITLIPRGATFSPMYDRVHLDEKWFFMKKTKRRVYLTPTEP-TPYLHTRHKSHIPKIMFLCAVARPRIN 259
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Match: UPI001C27ABF3 (uncharacterized protein LOC121745765 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27ABF3) HSP 1 Score: 64.7 bits (156), Expect = 2.130e-8 Identity = 45/197 (22.84%), Postives = 89/197 (45.18%), Query Frame = 3
Query: 147 LPKGVGLELAEKFGVGAQYPRQLWARVREKLDHCNTLWPRSASRSGRLSEFTPTKHVTIRKVSPTNRTLTLDQLSSKIAKVSFVAGSSQVQRWLKEMGV----TSVKRRITSSLLLTHRKNRVDFIPDQAARNGINFRSGFQTIHIDEAWFYLIRDRDRVRILPEEERVASTKVQHKSHIPKVMFICAVSRPDLSRD 725
L +G +E A+ F + + +LW +E++ A G++ + + + + N + T ++ S + V S + W+K+ + ++K +T+ + + + Q + + ++S +HIDE WFY+ + D +LP+E+ + + K +I KVMF+CAVSRP D
Sbjct: 32 LARGAVMEAADTFSISRKTVYRLWKATKEQMQRGEP-----AIMEGKIRGYHHVDRLDLDEEKVRNLS-TFERSSLRKMTVKLNVSKSTLDHWVKQGKLRPHTNAIKHALTNMNKVARARWSRSQLQPQITQGRVQYQSMHNVVHIDEKWFYMTKVSDIYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPQFGMD 221
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Match: UPI001C2558BC (uncharacterized protein LOC121796902 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2558BC) HSP 1 Score: 64.3 bits (155), Expect = 2.840e-8 Identity = 47/147 (31.97%), Postives = 73/147 (49.66%), Query Frame = 3
Query: 315 VTIRKVSPTNRTLTLD-------QLSSKIAKVSFVAG----SSQVQRWLK----EMGVTSVKRRITSSLLLTHRKNRVDFIPDQAARNGINFRSGFQTIHIDEAWFYLIRDRDRVRILPEEERVASTKVQHKSHIPKVMFICAVSRP 710
V+I+KV P + L LD S + +S AG + V RW+K +++K +T++ L + V+ + N I FR+ + TIHIDE WFY+ + R + P E+ T ++K IPK+MF+ AV RP
Sbjct: 66 VSIKKVRPYPKKLHLDVEVLKSMHFSKRCNLLSVAAGLGCSKATVWRWVKAGLIRPHTSAIKPNLTAANKLLRLRFTVESLELDRILNKIRFRNMYNTIHIDEKWFYMTKGAQRFYLAPGEQEPHRT-CKNKQFIPKIMFMYAVCRP 211
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Match: A0A1R3G118_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3G118_9ROSI) HSP 1 Score: 62.8 bits (151), Expect = 8.490e-8 Identity = 54/191 (28.27%), Postives = 86/191 (45.03%), Query Frame = 3
Query: 144 RLPKGVGLELAEKFGVGAQYPRQLWARVRE--KLDHCNTLWPRSASRSGRLSEFTPTKHVTIRKVSPTNRTLTLDQLSSKIAKVSFVAGSSQVQRWLKEMGVTSVKRRITSSLLLTHRKNRVDFIPDQAARNGINFRSGFQTIHIDEAWFYLIRDRDRVRILPEEERVASTKVQHKSHIPKVMFICAVSRP 710
+L G LA FGV + + LW R +E + H T ++ R + + + P +R TL ++ + K+S S + R LK + + +L L + R+ F + N F+ + TIHIDE WFYL + +LP+EE + K+ IPKVMF+ A++RP
Sbjct: 137 KLKDGTKKILASSFGVCTKSIQCLWKRAKETGNVYHMKT---KNCGRKRIQLDSDQFREI------PLSRRSTLRSMADAL-KIS----KSTLHRLLKIGAILRHSSPLRPNLTLEKKITRLRFCLKKLESNDSTFKDMYDTIHIDEKWFYLTKKSVNYYLLPDEEE-PHRNCKSKNFIPKVMFLAALARP 312
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 62.8 bits (151), Expect = 9.500e-8 Identity = 44/197 (22.34%), Postives = 88/197 (44.67%), Query Frame = 3
Query: 147 LPKGVGLELAEKFGVGAQYPRQLWARVREKLDHCNTLWPRSASRSGRLSEFTPTKHVTIRKVSPTNRTLTLDQLSSKIAKVSFVAGSSQVQRWLKEMGV----TSVKRRITSSLLLTHRKNRVDFIPDQAARNGINFRSGFQTIHIDEAWFYLIRDRDRVRILPEEERVASTKVQHKSHIPKVMFICAVSRPDLSRD 725
L +G +E A +F + + +LW ++++ A G+L + + + + N ++ L + S + + + + W+K+ + ++K +T L K + + + ++F +HIDE WFY+ + DR +LP+E+ + + K +I KVMF+CAVSRP +
Sbjct: 33 LRRGTVMEAAGEFSISRKTVYRLWKVAKDQMQQGEP-----AIMEGKLKGYQHADKLNLDEDKVRNLSI-LQRSSIRTMACNLSVSKTTIHNWIKQDKLRPHTNAIKPALTELNKLARLKWCLTQLQPSITQGKVHFHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPQFDSE 222 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22733.6057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22733.6057.1 >prot_H-paniculata_contig22733.6057.1 ID=prot_H-paniculata_contig22733.6057.1|Name=mRNA_H-paniculata_contig22733.6057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp MGVTSVKRRITSSLLLTHRKNRVDFIPDQAARNGINFRSGFQTIHIDEAWback to top mRNA from alignment at H-paniculata_contig22733:1492..2225+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22733.6057.1 ID=mRNA_H-paniculata_contig22733.6057.1|Name=mRNA_H-paniculata_contig22733.6057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=734bp|location=Sequence derived from alignment at H-paniculata_contig22733:1492..2225+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22733:1492..2225+ >mRNA_H-paniculata_contig22733.6057.1 ID=mRNA_H-paniculata_contig22733.6057.1|Name=mRNA_H-paniculata_contig22733.6057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at H-paniculata_contig22733:1492..2225+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |