prot_H-paniculata_contig22732.6056.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22732.6056.1
Unique Nameprot_H-paniculata_contig22732.6056.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length102
Homology
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Match: A0A2P6UYX8_9CHLO (Retrotransposon Ty1-copia subclass n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYX8_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 3.670e-15
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 0
Query:   15 YRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCREDYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTTG 101
            Y  +VGSLMY S  TRPDIA  V   ARHM +P  + ++  K +  Y +  PD+G+TFGA S G  L+ F DAD   DI+  +STTG
Sbjct:  184 YSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTG 268          
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Match: A0A2P6UYV9_9CHLO (Retrovirus-related Pol poly from transposon TNT 1-94 n=3 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYV9_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 4.220e-15
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 0
Query:   15 YRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCREDYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTTG 101
            Y  +VGSLMY S  TRPDIA  V   ARHM +P  + ++  K +  Y +  PD+G+TFGA S G  L+ F DAD   DI+  +STTG
Sbjct:  736 YSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTG 820          
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Match: A0A2P6UYV5_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYV5_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 4.300e-15
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 0
Query:   15 YRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCREDYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTTG 101
            Y  +VGSLMY S  TRPDIA  V   ARHM +P  + ++  K +  Y +  PD+G+TFGA S G  L+ F DAD   DI+  +STTG
Sbjct:  840 YSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTG 924          
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Match: A0A2P6UZ08_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZ08_9CHLO)

HSP 1 Score: 79.3 bits (194), Expect = 4.340e-15
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 0
Query:   15 YRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCREDYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTTG 101
            Y  +VGSLMY S  TRPDIA  V   ARHM +P  + ++  K +  Y +  PD+G+TFGA S G  L+ F DAD   DI+  +STTG
Sbjct: 1002 YSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTG 1086          
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Match: A0A0J7KE17_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KE17_LASNI)

HSP 1 Score: 77.8 bits (190), Expect = 5.250e-15
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 0
Query:   14 EYRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCREDYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTTG 101
            +YR +VG L YAS GTRPDI + V+  +R++ +P +E +   KRI  Y     ++ + F    NG  L GF DADW  D +  +STTG
Sbjct:   76 QYREVVGKLQYASQGTRPDITFAVNSVSRYLPNPGKEHWMATKRILRYLKETQNMALEFNCNQNGR-LIGFCDADWGNDSDTRRSTTG 162          
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Match: A0A0J7JUQ8_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7JUQ8_LASNI)

HSP 1 Score: 76.3 bits (186), Expect = 6.250e-15
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 0
Query:   15 YRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCREDYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTTG 101
            YR  +GSLMY S  TRPDI + V++A+RHME P +  ++  KRI  Y     + G+ FG   + H L+ + D+D+  ++E  +STTG
Sbjct:   34 YREAIGSLMYLSIATRPDITFAVNRASRHMEKPSKLHWNAVKRILKYLKGTLNYGLRFGISQDRH-LQAYSDSDYAGELETRRSTTG 119          
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Match: A0A2P6UZ01_9CHLO (Gag-Pol poly n=4 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZ01_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 7.980e-15
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 0
Query:   15 YRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCREDYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTTG 101
            Y  +VGSLMY S  TRPDIA  V   ARHM +P  + ++  K +  Y +  PD+G+TFGA S G  L+ F DAD   DI+  +STTG
Sbjct: 1187 YSALVGSLMYLSICTRPDIAQAVGALARHMANPTIDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTG 1271          
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Match: A0A1X1QS81_9GAMM (Uncharacterized protein n=1 Tax=Cycloclasticus sp. symbiont of Poecilosclerida sp. M TaxID=1840537 RepID=A0A1X1QS81_9GAMM)

HSP 1 Score: 75.1 bits (183), Expect = 8.070e-15
Identity = 34/87 (39.08%), Postives = 49/87 (56.32%), Query Frame = 0
Query:   15 YRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCREDYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTTG 101
            Y+  +GSL+Y STGTRPDI + V   A+   DP +  +   KRI  Y     DLG+ +    +     G+ D+DW  D++D KST+G
Sbjct:   60 YQSCIGSLLYLSTGTRPDITFAVSNVAKFCSDPTKRHWIGVKRILRYLKGTSDLGLLYNEGGDLQECFGYSDSDWAGDLDDRKSTSG 146          
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Match: F0WZC0_9STRA (Putative polyprotein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WZC0_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 8.190e-15
Identity = 34/87 (39.08%), Postives = 50/87 (57.47%), Query Frame = 0
Query:   15 YRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCREDYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTTG 101
            YR +V SL+Y STGTRPDIA++V Q +RH+E P  E ++   R+  Y  T    G+ +  + N      + DADW  + +  KS +G
Sbjct:   13 YRSLVNSLLYISTGTRPDIAFSVCQLSRHLEKPSEEHWNAAIRVLRYLKTTASNGIIYQGRKNWIRTSAYSDADWASNNDSRKSISG 99          
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Match: F0X2M1_9STRA (Putative polyprotein n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0X2M1_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 8.980e-15
Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 0
Query:   15 YRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCREDYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTTG 101
            YR +VGSL+Y STGTRPDIA++V Q  RH+E P  E ++   R+  Y  T    G+ +    N      + DADW  + +  KS +G
Sbjct:   38 YRSLVGSLLYISTGTRPDIAFSVCQLIRHLEKPSEEHWNVAIRVLRYLKTTASNGIIYQEGKNWIQTSAYSDADWASNKDSRKSMSG 124          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22732.6056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6UYX8_9CHLO3.670e-1548.28Retrotransposon Ty1-copia subclass n=1 Tax=Micract... [more]
A0A2P6UYV9_9CHLO4.220e-1548.28Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2P6UYV5_9CHLO4.300e-1548.28Gag-Pol poly (Fragment) n=1 Tax=Micractinium condu... [more]
A0A2P6UZ08_9CHLO4.340e-1548.28Gag-Pol poly (Fragment) n=1 Tax=Micractinium condu... [more]
A0A0J7KE17_LASNI5.250e-1542.05Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]
A0A0J7JUQ8_LASNI6.250e-1541.38Integrase core domain protein n=1 Tax=Lasius niger... [more]
A0A2P6UZ01_9CHLO7.980e-1548.28Gag-Pol poly n=4 Tax=Micractinium conductrix TaxID... [more]
A0A1X1QS81_9GAMM8.070e-1539.08Uncharacterized protein n=1 Tax=Cycloclasticus sp.... [more]
F0WZC0_9STRA8.190e-1539.08Putative polyprotein n=1 Tax=Albugo laibachii Nc14... [more]
F0X2M1_9STRA8.980e-1540.23Putative polyprotein n=1 Tax=Albugo laibachii Nc14... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 12..101
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 12..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22732contigH-paniculata_contig22732:1829..2212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22732.6056.1mRNA_H-paniculata_contig22732.6056.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22732 1694..2472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22732.6056.1 ID=prot_H-paniculata_contig22732.6056.1|Name=mRNA_H-paniculata_contig22732.6056.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp
MSAPGRGRSGNSTEYRGMVGSLMYASTGTRPDIAYTVHQAARHMEDPCRE
DYSTCKRIFCYFSTVPDLGMTFGAKSNGHGLEGFGDADWPEDIEDLKSTT
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like