mRNA_H-paniculata_contig22728.6054.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22728.6054.1
Unique NamemRNA_H-paniculata_contig22728.6054.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Match: A0A6H5JPB9_9PHAE (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPB9_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 1.950e-93
Identity = 150/168 (89.29%), Postives = 162/168 (96.43%), Query Frame = 1 
Query:    1 GAVKQYVVSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKALDRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRAKLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKVAREELGQECDYEKEAANQ 504
            G+VKQYV SDANAERLAETLCRMRGAALKLGQMLSIQDESVIP SLAKALDRVRQGAD+MP +QLH+QLEK+LG +WRSK+A+FDETPIAAASIGQVHRAKL DGT+VAMKIQYPGVADSVESDL NLQRLVQLTNILPPGLYIEEII+VAREELG+ECDYE+EAANQ
Sbjct:  282 GSVKQYVASDANAERLAETLCRMRGAALKLGQMLSIQDESVIPPSLAKALDRVRQGADVMPLKQLHRQLEKNLGMDWRSKLAAFDETPIAAASIGQVHRAKLPDGTDVAMKIQYPGVADSVESDLKNLQRLVQLTNILPPGLYIEEIIRVAREELGEECDYEREAANQ 449
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BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Match: A0A835YMK7_9STRA (Protein required for ubiquinone biosynthesis and for respiratory growth n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK7_9STRA)

HSP 1 Score: 254 bits (649), Expect = 5.500e-78
Identity = 127/167 (76.05%), Postives = 147/167 (88.02%), Query Frame = 1 
Query:    4 AVKQYVVSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKALDRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRAKLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKVAREELGQECDYEKEAANQ 504
            +VKQ + SDANAERLAE LCRMRGAALKLGQMLSIQDE VIP  LAKAL+RVR GAD MP++QLH QL  +LG  WR+++A FDE P+AAASIGQVHRAKL+DGTEVAMKIQYPGVADS+ESDL+NL+RLV +TN+LPPGL++EEI++VAREEL  ECDY  EAANQ
Sbjct:  290 SVKQLMASDANAERLAEALCRMRGAALKLGQMLSIQDEGVIPPQLAKALERVRAGADTMPAKQLHAQLRAALGDGWRARLAEFDEAPLAAASIGQVHRAKLLDGTEVAMKIQYPGVADSIESDLSNLERLVTMTNLLPPGLFVEEIVEVAREELKLECDYTLEAANQ 456
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BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Match: A0A7S0SUJ9_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUJ9_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.610e-69
Identity = 116/161 (72.05%), Postives = 136/161 (84.47%), Query Frame = 1 
Query:   22 VSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKALDRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRAKLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKVAREELGQECDYEKEAANQ 504
            +SDANAERLAE LCRMRGAALKLGQMLSIQD+ V+P +L+KAL+RVRQ AD MP  QL +QL   LG +WRSK   F++ PIAAASIGQVHRAKL+D T VA+KIQYPGVADS+ESDL NL+RLV +TN+LPPGLYI++IIKVA EEL QEC+Y  EA +Q
Sbjct:  135 LSDANAERLAEALCRMRGAALKLGQMLSIQDDGVLPPALSKALERVRQSADYMPKNQLEQQLVLQLGESWRSKFLEFEDIPIAAASIGQVHRAKLLDDTIVAVKIQYPGVADSIESDLQNLKRLVNITNLLPPGLYIDQIIKVATEELAQECNYVSEAQSQ 295
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BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Match: A0A1V9Z8E2_9STRA (ABC1 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8E2_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.190e-68
Identity = 117/166 (70.48%), Postives = 134/166 (80.72%), Query Frame = 1 
Query:    7 VKQYVVSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKALDRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRAKLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKVAREELGQECDYEKEAANQ 504
            +K  ++SDANAERLA+ LC MRGAALKLGQMLSIQDES IP  LA ALDRVRQGA +MP  QLH QL K+ G +WRSK  SFDETP+AAASIGQVH+A L+ G  VA+KIQYPGVA+S+ SDL NL+RLV   NI P GLYI+EII+V +EEL  ECDYE EAANQ
Sbjct:  175 LKNALISDANAERLADALCTMRGAALKLGQMLSIQDESTIPPQLALALDRVRQGAHIMPKAQLHAQLTKAWGDDWRSKFESFDETPVAAASIGQVHQAVLLSGERVAVKIQYPGVAESIASDLLNLKRLVTYMNIFPKGLYIDEIIRVGQEELTVECDYENEAANQ 340
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BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Match: A0A067CE53_SAPPC (Atypical/ABC1/ABC1-A protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CE53_SAPPC)

HSP 1 Score: 224 bits (570), Expect = 2.560e-67
Identity = 115/166 (69.28%), Postives = 133/166 (80.12%), Query Frame = 1 
Query:    7 VKQYVVSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKALDRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRAKLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKVAREELGQECDYEKEAANQ 504
            +K  ++SDANAERLA+ LC MRGAALKLGQMLSIQDES IP  LA ALDRVRQGA +MP  QLH QL K+ G +WR+K  SFDE P+AAASIGQVH+A L+ G  VA+KIQYPGVADS+ SDL NL+RLV   NI P GLYI+EII+V ++EL  ECDYE EAANQ
Sbjct:  195 LKNALISDANAERLADALCTMRGAALKLGQMLSIQDESTIPPQLALALDRVRQGAHIMPKAQLHAQLTKAWGDDWRAKFESFDENPVAAASIGQVHQAVLLSGERVAVKIQYPGVADSIASDLLNLKRLVTYMNIFPKGLYIDEIIRVGQDELTAECDYENEAANQ 360
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BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Match: A0A4D9DI78_9STRA (ABC1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DI78_9STRA)

HSP 1 Score: 224 bits (571), Expect = 3.960e-67
Identity = 110/168 (65.48%), Postives = 137/168 (81.55%), Query Frame = 1 
Query:    1 GAVKQYVVSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKALDRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRAKLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKVAREELGQECDYEKEAANQ 504
            GA  + ++SD +AE +AETLC+MRGAALKLGQMLS+QDE ++P  L KAL+RVRQGAD+MP  QLH QLE  LGA WR++  +F E P+AAASIGQVHRA+ +DG +VA+K+QYPGV DS+ESDL NL+RLV   N+LPPGLY++EI+ VAREEL  ECDY+ EA NQ
Sbjct:  224 GARPRTLLSDRSAEHIAETLCKMRGAALKLGQMLSLQDEGILPEPLTKALERVRQGADVMPRAQLHAQLEAELGAGWRARFRTFGEKPVAAASIGQVHRARTIDGRDVAVKVQYPGVGDSIESDLKNLKRLVTYLNVLPPGLYVDEILDVAREELILECDYKLEAQNQ 391
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BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Match: H3GJS1_PHYRM (ABC1 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GJS1_PHYRM)

HSP 1 Score: 221 bits (564), Expect = 9.980e-67
Identity = 114/162 (70.37%), Postives = 133/162 (82.10%), Query Frame = 1 
Query:   19 VVSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKALDRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRAKLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKVAREELGQECDYEKEAANQ 504
            +VSDANAE+LAETLC MRGAALKLGQMLSIQDE++IP  LA ALDRVR+ A +MP  QLH+QLE  LG +WRSK   FD+ PIAAASIGQVHRA L++G  VA+KIQYPGVA+S+ SDL NL+RLV  TNILP GLYI+EII+V +EEL  EC+Y  EA NQ
Sbjct:  166 LVSDANAEKLAETLCTMRGAALKLGQMLSIQDEAMIPSKLAVALDRVRENAHVMPKDQLHQQLESELGEDWRSKFQEFDDVPIAAASIGQVHRATLLNGDRVAIKIQYPGVAESIGSDLLNLKRLVTYTNILPRGLYIDEIIRVGKEELTAECNYANEAENQ 327
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BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Match: A0A1V9ZC44_9STRA (ABC1 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC44_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.160e-66
Identity = 117/167 (70.06%), Postives = 131/167 (78.44%), Query Frame = 1 
Query:    4 AVKQYVVSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKALDRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRAKLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKVAREELGQECDYEKEAANQ 504
            A+K   VSDANAERLA+ LC MRGAALKLGQMLSIQDES IP  LA ALDRVRQGA +MP  QLH QL K+ G +WRS+   FDE P+AAASIGQVHRA L  G  VA+KIQYPGVA+S+ SDL NL+RLV   NI P GLYI+EII+V +EEL  ECDYE EAANQ
Sbjct:  219 ALKNAFVSDANAERLADALCTMRGAALKLGQMLSIQDESTIPPQLALALDRVRQGAHIMPKAQLHSQLTKAWGDDWRSQFEEFDENPVAAASIGQVHRATLKSGEVVAVKIQYPGVAESIASDLLNLKRLVTYMNIFPKGLYIDEIIRVGQEELTVECDYENEAANQ 385
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BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Match: A0A662XG01_9STRA (ABC1 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XG01_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.810e-66
Identity = 114/162 (70.37%), Postives = 133/162 (82.10%), Query Frame = 1 
Query:   19 VVSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKALDRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRAKLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKVAREELGQECDYEKEAANQ 504
            +VSD+NAE+LAETLC MRGAALKLGQMLSIQDES+IP  LA AL+RVR+ A +MP  QLHKQLE  LG +WRS    FD+ PIAAASIGQVHRA L++G  VA+KIQYPGVA+S+ SDL NL+RLV  TNILP GLYI+EII+V +EEL  ECDY +EA NQ
Sbjct:  195 LVSDSNAEKLAETLCTMRGAALKLGQMLSIQDESMIPSKLAVALNRVRENAHVMPKDQLHKQLESELGKDWRSNFQEFDDVPIAAASIGQVHRATLLNGDRVAIKIQYPGVAESISSDLLNLKRLVTYTNILPRGLYIDEIIRVGKEELTAECDYVQEADNQ 356
[Close]
BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Match: A0A0P1AZD8_PLAHL (Atypical abc1 abc1-a protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZD8_PLAHL)

HSP 1 Score: 220 bits (561), Expect = 4.550e-66
Identity = 113/162 (69.75%), Postives = 131/162 (80.86%), Query Frame = 1 
Query:   19 VVSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKALDRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRAKLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKVAREELGQECDYEKEAANQ 504
            +VSDAN E+LAETLC MRGAALKLGQMLSIQDE++IP  LA ALDRVR+ A +MP  QLH+QLE  LG  WRS+   FD+ PIAAASIGQVHRA L++G  VA+KIQYPGVA+S+ SDL NL+RLV  TNILP GLYI+EII+V +EEL  ECDY  EA NQ
Sbjct:  189 LVSDANVEKLAETLCTMRGAALKLGQMLSIQDEAMIPSKLAVALDRVRENAHVMPKDQLHRQLENELGHEWRSRFQEFDDVPIAAASIGQVHRATLLNGDRVAIKIQYPGVAESISSDLLNLKRLVTYTNILPRGLYIDEIIRVGKEELTAECDYVSEAHNQ 350
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22728.6054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPB9_9PHAE1.950e-9389.29ABC1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YMK7_9STRA5.500e-7876.05Protein required for ubiquinone biosynthesis and f... [more]
A0A7S0SUJ9_9STRA1.610e-6972.05Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A1V9Z8E2_9STRA2.190e-6870.48ABC1 domain-containing protein n=1 Tax=Achlya hypo... [more]
A0A067CE53_SAPPC2.560e-6769.28Atypical/ABC1/ABC1-A protein kinase n=2 Tax=Saprol... [more]
A0A4D9DI78_9STRA3.960e-6765.48ABC1 domain-containing protein n=2 Tax=Monodopsida... [more]
H3GJS1_PHYRM9.980e-6770.37ABC1 domain-containing protein n=6 Tax=Phytophthor... [more]
A0A1V9ZC44_9STRA1.160e-6670.06ABC1 domain-containing protein n=1 Tax=Thraustothe... [more]
A0A662XG01_9STRA1.810e-6670.37ABC1 domain-containing protein n=1 Tax=Nothophytop... [more]
A0A0P1AZD8_PLAHL4.550e-6669.75Atypical abc1 abc1-a protein kinase n=1 Tax=Plasmo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22728contigH-paniculata_contig22728:252..3842 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score296.2
Seed ortholog evalue9.6e-78
Seed eggNOG ortholog2880.D8LRI9
Preferred nameADCK3
KEGG koko:K08869
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001655,GO:0001822,GO:0002064,GO:0003674,GO:0003824,GO:0004672,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0006119,GO:0006122,GO:0006139,GO:0006163,GO:0006464,GO:0006468,GO:0006725,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006753,GO:0006778,GO:0006787,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009653,GO:0009888,GO:0009987,GO:0010224,GO:0015980,GO:0015994,GO:0015996,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0019866,GO:0019898,GO:0021549,GO:0021575,GO:0021587,GO:0021680,GO:0021692,GO:0021695,GO:0021696,GO:0022037,GO:0022900,GO:0022904,GO:0030154,GO:0030198,GO:0030554,GO:0030855,GO:0030902,GO:0031090,GO:0031312,GO:0031314,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032194,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032835,GO:0032836,GO:0033013,GO:0033015,GO:0034641,GO:0035850,GO:0036094,GO:0036211,GO:0042180,GO:0042181,GO:0042440,GO:0042773,GO:0042775,GO:0043062,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043531,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045333,GO:0046034,GO:0046149,GO:0046483,GO:0046700,GO:0046777,GO:0048468,GO:0048513,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0051186,GO:0051187,GO:0051188,GO:0055086,GO:0055114,GO:0060322,GO:0060429,GO:0061005,GO:0061318,GO:0070013,GO:0071704,GO:0071840,GO:0072001,GO:0072006,GO:0072009,GO:0072010,GO:0072015,GO:0072073,GO:0072112,GO:0072310,GO:0072311,GO:0072521,GO:0097159,GO:0097367,GO:0140096,GO:1901004,GO:1901006,GO:1901135,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.ubiquinone biosynthetic process
EggNOG OGsCOG0661@1,KOG1234@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001
Exons4
Model size504
Cds size504
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22728.6054.1prot_H-paniculata_contig22728.6054.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22728 252..3842 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929632.1866934-CDS-H-paniculata_contig22728:251..3621622929632.1866934-CDS-H-paniculata_contig22728:251..362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22728 252..362 +
1691480944.008174-CDS-H-paniculata_contig22728:251..3621691480944.008174-CDS-H-paniculata_contig22728:251..362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22728 252..362 +
1622929632.2061577-CDS-H-paniculata_contig22728:1000..11771622929632.2061577-CDS-H-paniculata_contig22728:1000..1177Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22728 1001..1177 +
1691480944.0227654-CDS-H-paniculata_contig22728:1000..11771691480944.0227654-CDS-H-paniculata_contig22728:1000..1177Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22728 1001..1177 +
1622929632.2294989-CDS-H-paniculata_contig22728:1609..17681622929632.2294989-CDS-H-paniculata_contig22728:1609..1768Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22728 1610..1768 +
1691480944.0341635-CDS-H-paniculata_contig22728:1609..17681691480944.0341635-CDS-H-paniculata_contig22728:1609..1768Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22728 1610..1768 +
1622929632.244183-CDS-H-paniculata_contig22728:3785..38421622929632.244183-CDS-H-paniculata_contig22728:3785..3842Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22728 3786..3842 +
1691480944.0478384-CDS-H-paniculata_contig22728:3785..38421691480944.0478384-CDS-H-paniculata_contig22728:3785..3842Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22728 3786..3842 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22728.6054.1

>prot_H-paniculata_contig22728.6054.1 ID=prot_H-paniculata_contig22728.6054.1|Name=mRNA_H-paniculata_contig22728.6054.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp
GAVKQYVVSDANAERLAETLCRMRGAALKLGQMLSIQDESVIPLSLAKAL
DRVRQGADMMPSRQLHKQLEKSLGANWRSKVASFDETPIAAASIGQVHRA
KLMDGTEVAMKIQYPGVADSVESDLTNLQRLVQLTNILPPGLYIEEIIKV
AREELGQECDYEKEAANQ
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mRNA from alignment at H-paniculata_contig22728:252..3842+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22728.6054.1 ID=mRNA_H-paniculata_contig22728.6054.1|Name=mRNA_H-paniculata_contig22728.6054.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3591bp|location=Sequence derived from alignment at H-paniculata_contig22728:252..3842+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGCGGTAAAGCAGTACGTCGTTTCGGACGCAAACGCGGAGCGATTGGC
AGAGACGTTGTGCCGCATGAGGGGTGCCGCGCTGAAGCTGGGTCAAATGT
TGTCCATACAGGTATTGCCTCCTAGTACTTGGATCATATTGCCAACTTTC
CGATCCTAGTTGTGAATTCGAAAGGACCGAGATGTCGGGTAGTTTTGATT
ATTATTTTTTTTTTCAGCCGTTTTTTTTTTTTTTTTTTTTTTTGCAAAAT
TGCAGGCACTCGCGATAAGGGGTCAGATGTTTCGCCGCACTTGGTGTGCG
ATGTCAAAAAAGATGAAATGTCACTTTCTCTCGAACGATTTTTGTATCGC
GATAAGGTGGTTCGGACTCATCCTTCAGTAGGGGGGGGGGAGTATTTGGA
TCGCTTCGTTGAACGAAGGAATCGCTTTGAGAGGGGACCGGGCATCTGTA
TTTTTTGTTGTTGTAAATTTGTTGCTCCCCTTGAGCAGAAACACCGCTTC
AACTGGCGGACTGGGCACTTTTCGGGACCCAGAAACATATGCAATTGACA
TGAATTCGAATCGCGTATTTTTTTCACCGGTTTTGTGAAGCGCCCATCGC
TAAACAATTGACTTCCCCCTCTCCCCCCCCCAAACCTGGGATGACTCTTC
GAGGTATACCACTTCACACTGCTCGCACCTGAAGTAATCGCGTGCTCTAC
CCTCGTCGTACTGTACATGCACATGCCCTGTCTGTTGCTGTTCGGGTAGG
ACGAGAGCGTTATCCCACTTTCGTTGGCCAAGGCGCTTGACCGAGTACGA
CAGGGCGCCGATATGATGCCCTCTAGACAGTTGCACAAGCAGCTGGAGAA
AAGCCTCGGTGCTAACTGGAGGAGCAAGGTGGCTTCATTCGACGAGACTC
CGATTGCTGCTGCCAGCATTGGACAGGTATATTATGCAAAGGGCTGATGT
TCTTCGCTAAGATTCCCCCACCATTTGCGTTGTACCTTTTATTGATGGGG
TTTAAGGGTTTTACTGTACCCGAGATGACACACTTTCGTGCGGTAAGAGA
TTCGCAGCAGATTTTTTCGGGAATTTCCAGGTGTGGTGTACTGCAAACCT
TGCGAGACACCGTTGACATGAATAATCTGCCTTCCTTCTGAGGTCAAAAT
GTCCAGCTTGTTTTCCTACTGTTCTATACTCAAGTAGTCCTACAACACTG
GCCATGGGTTCCGTGTGTCTGCAGCAATGGTGCCATCCTAGCCTCCACTA
GGCACAGCGTTTGTCGATTCCACTGTATGGCTTCGCATAGATGACACGCG
TGAACACTCGCGCGTGCATTGTACATCTTCCTTGTGTTTTACCTGGATCT
CTCGTCAGGTACACCGAGCGAAATTGATGGACGGGACGGAGGTTGCCATG
AAGATCCAGTACCCAGGGGTGGCAGACAGCGTGGAGTCGGACCTGACGAA
CTTACAGCGACTGGTACAGTTGACTAATATTCTACCGCCTGGTCTTTACA
TCGAGGAAATCATAAAGGTGCGTCACCTGTAGCATTTAACTAAAGATACA
TAAATAGCATAACGATACTGCGTGTTTCTTATTCGAACATGATCGAAAAT
CGTTAGGGTGCGAACGGTCCAATATGTCGAAAGAGGTATTGAGAAGCAAG
CCTGTTGCAGTGTGTCATTCCCTCCGACAAATACGAATAATTGGCATACT
CGCCTCGAAAATAGAAAATTATTCGCTTAAGTTTCATGATGAGCGGACAC
ATGAAATGAAGTACCTACCCCTTTCCTTTCGATTTACGAGTGGTATTATT
AGTCGTGGATGTTGCGAGGAACATCGAATATATGACTTCATTCTGAAACT
CAGGCAATTATGTGGTAATTTTCGTGACGAATATTCCAATTCTCCAAATA
TTCGTATTCGTATTCGTCCGGGGGTGCATGCAGCGTTTGCGGGGAAGTGA
TTGATCTTTCTGATTTCGTATTTTCTATTGAAAGATGGCTAATTTAAGTT
TGGCTGTCAAATTTAGCCATAAGGAATACCTTTTGAAAAAACTATGTTTC
TCGGGAAATGCTGCACTCACCGTCATTGTATGGAAGACTCTTGAGATATA
TCTTGTACAGCATCAAAGCGAGCGGCCAATGATAGGGTTTAGGTTACGGG
TTAGCGAGAAATATTTTTATTTACTGTTAGGGGTGCGCCTAACCCTCATT
TGTAGCCAAATTCTGGCGATAGCGACCACATCGATAAAGCGCCGAATAAA
GAAAAAAAACCTGTTTATCCCCTGATAGATAATGCTATCTACATCCCACA
TAGTATTTGTATTTAGTGTCGGGTATCCACGCACTTGTAAGCTGAATTAC
TCGATACAGGTTAGGAGTTGGCTCGTGAGACTCGACACACACTGGGGTAT
GTGCCTAGTCTAGAGCCTGTTCTTATGGGACGTTTCATTCGCGCTATAAG
AATTCCAAACACCCCAATAAATAGTGTGTTTTTTTCCTACTTTCTCTGTG
AAGATGCTTCGTCGTCATGACTTGATAAATCCATAAAAAAAATACATAGC
TGTGGTTTTTCGTGCACACGACGCAAAAAACCGCATCCCAATCGACGACC
TTGCTGGAGTGTATTTATTGACAACATCGTCTATCAACACAAACAAGTAC
CCAAAATACTCGAATTTAGAGTGTGGGAGAGGGCATCCTTTTCGGACGTG
AATATTCCACACATCTGGTCGTAGGGGCATATTTCGCCTGGCATATTGCG
ATGGATGTAGCTCGTTATTGTAGCCAGCATTCTTAGGGCCCCAAAGCACT
CAAAACTTAGCTTTGCTCGACCTTTTCACCGTGTAGCTGCCCTGCGCCAG
TACATGATAAAGGGGGACAACGTGGTTAACATAAAGCCAGCAGCAGCAGT
AGCCGCAGCAGCGCTTCTTCGCGCATCCTACACCAAACCACCCTTTAATA
TAATCAGGTGACGTTGGGTCTCTCCATGGTTGTATGTGTGTGCTTTTTTG
GGGTGACGTCAACTACATGTTTTTTATTATTTGGCTCAAACCCTCTAAAG
AGCCGGCAAAAATGCGTGGTCGATACGAAATTTCAGGACACAATTACCGC
CTTATTCAGAACAATTCATGACTTAGGCGCACCCCTAACTGTTTATAGGC
GATACTGAGACAACCCGCGTCGTATGTTCTCCAGCGGGGTACTTTCGCCC
CGCTACGCTCGCTCGGCGCATTGTGTGCTTCGTTGATTGCACAGGCGCTT
GAGAGAGCGTCCACAATCGTTGAAGATCCCCCGCAAGACCACTTGCGTAA
TACGTTATGTTGTCGTACAATGGTAGTGCCGTTACATTTGTTTCTGGCGC
TGCGGCTGTCATTGTTTCTGGCGATGGGCGTGTGTATTGTACTTTTTTTC
AAGTATTCCATCTCACATGAGATGTGTTAGGCGGAGCCTGGTATTTGTGT
CCTGTTGCTTAGATTTGCCCCCAAGTATTTCCGACTCATGCCGTTTGTGT
GTTAAATGCCTCAACGTCTCTGTGACCAAGCAAGGTGGCGCGAGAAGAAC
TGGGCCAGGAGTGCGATTACGAGAAGGAAGCTGCGAACCAG
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Coding sequence (CDS) from alignment at H-paniculata_contig22728:252..3842+

>mRNA_H-paniculata_contig22728.6054.1 ID=mRNA_H-paniculata_contig22728.6054.1|Name=mRNA_H-paniculata_contig22728.6054.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at H-paniculata_contig22728:252..3842+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGCGGTAAAGCAGTACGTCGTTTCGGACGCAAACGCGGAGCGATTGGC
AGAGACGTTGTGCCGCATGAGGGGTGCCGCGCTGAAGCTGGGTCAAATGT
TGTCCATACAGGGGGCGGTAAAGCAGTACGTCGTTTCGGACGCAAACGCG
GAGCGATTGGCAGAGACGTTGTGCCGCATGAGGGGTGCCGCGCTGAAGCT
GGGTCAAATGTTGTCCATACAGGACGAGAGCGTTATCCCACTTTCGTTGG
CCAAGGCGCTTGACCGAGTACGACAGGGCGCCGATATGATGCCCTCTAGA
CAGTTGCACAAGCAGCTGGAGAAAAGCCTCGGTGCTAACTGGAGGAGCAA
GGTGGCTTCATTCGACGAGACTCCGATTGCTGCTGCCAGCATTGGACAGG
ACGAGAGCGTTATCCCACTTTCGTTGGCCAAGGCGCTTGACCGAGTACGA
CAGGGCGCCGATATGATGCCCTCTAGACAGTTGCACAAGCAGCTGGAGAA
AAGCCTCGGTGCTAACTGGAGGAGCAAGGTGGCTTCATTCGACGAGACTC
CGATTGCTGCTGCCAGCATTGGACAGGTACACCGAGCGAAATTGATGGAC
GGGACGGAGGTTGCCATGAAGATCCAGTACCCAGGGGTGGCAGACAGCGT
GGAGTCGGACCTGACGAACTTACAGCGACTGGTACAGTTGACTAATATTC
TACCGCCTGGTCTTTACATCGAGGAAATCATAAAGGTACACCGAGCGAAA
TTGATGGACGGGACGGAGGTTGCCATGAAGATCCAGTACCCAGGGGTGGC
AGACAGCGTGGAGTCGGACCTGACGAACTTACAGCGACTGGTACAGTTGA
CTAATATTCTACCGCCTGGTCTTTACATCGAGGAAATCATAAAGGTGGCG
CGAGAAGAACTGGGCCAGGAGTGCGATTACGAGAAGGAAGCTGCGAACCA
GGTGGCGCGAGAAGAACTGGGCCAGGAGTGCGATTACGAGAAGGAAGCTG
CGAACCAG
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