prot_H-paniculata_contig22711.6051.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22711.6051.1
Unique Nameprot_H-paniculata_contig22711.6051.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length720
Homology
BLAST of mRNA_H-paniculata_contig22711.6051.1 vs. uniprot
Match: A0A6H5KQW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQW2_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 1.560e-65
Identity = 331/790 (41.90%), Postives = 404/790 (51.14%), Query Frame = 0
Query:    2 GTVQEREEREQQCRDKVDRGLMRMERLKEENAFAAAAAV-----VSPSMSFGGSSIRPPPSRRIQAPDLASYKYQVEQQSLCRQIEDLQWELQNLKRRLEERERXXXXARTDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARESAA-------KEGGDHRAVLETEVRGREEAKAAVAAVEAAARDREATLTVALEKSIEELERXXXXXXXRRELSPNCRGMDKRSPEDTINIEEVQNRAKELESVKCSLAARDVELAAIADATAGFARQEVREPRGRGSGVGQVYGGGGPALRGALAAATDARCARRLVADLEEECSSLKDASTRARGDISRLRGELKVVK--EEAVGAAEXXXXXXXXXTSR---------------NVALSSSASAVGEQMGKTRDRALAAEEALEKALTGAQQAWRLMTSCLITESGDDDIDADASISSTWYRQPRPA------IW-HPG--VDPYLWELVAGAEALTSAHRRRGCSLRRAQVTVRAKTACAREARRREXXXXXXXXXXXSRLRDAVAALDEC----EQHQ------------DGGGSNEGRRHGGDESNGRFCGPSPGQQEHLRQIRREVDRLEGQNQHLRLSLVGDRL-----MRE--RSTSRGGGGRKAPPQRTFFPK---LGSDTSADPG------VGRWECRPGERLSGSEGAVSLGSRSPTRSWNAGAKARCGAGQWSPVEDVDFAGREGPQGAASDTGGDRGFVESHATGLYDR------TPQDDGSGGTVVPGW 715
            G+V+EREEREQQCRD+VD GL+RMERLK                 SP +S   S+  P   R I A     ++ + E Q L RQ+EDLQW+ + LKRR+EER+     AR +A                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  R+ AA       +   + R+ LE E  GR+    A AA EA ARDR A L+ +L  +  E +          E +       K+  + T+  E+V  RA+E+ES++C+LAARDVEL +I DATAGF    V        G+     GG  ALRGALAAAT+AR A RLVA+LEEECSSLK        D  RLR  L+ V+  E+   AA XXXXXXXXX                  N      ++A  + M K   R   AE+AL+KAL GAQ+AW +++SCL ++ G   +D D    ST      P       +W HP   VDP L  L+ G EAL +A+RRRG + R+A V  RAK  CAREARRRE   XXXXXXXX RL +A+ ALD+C    EQ Q            DG G   G    GD   GR    S  Q+EHLRQIR EVDRLEGQN+ LR SL G  +     M E  R T  G  G   P QR  FP     G D + + G        RWE   G  LSG   + S  S SP RSW A +       + SP        R G  G                  + +        PQDDGSGGT+VP W
Sbjct: 1141 GSVEEREEREQQCRDQVDLGLLRMERLKXXXXXXXXXXXXXXXXASPPVS---SAWLPGAPRPISA-QADPWRGRAELQRLRRQLEDLQWDTRTLKRRIEERDNQVRDARAEADGLNSRSRTAERELAGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDRAANAAAAAERSAQEQRSRLEQE--GRDRLSVATAA-EARARDRVAELSASLGAATAERDALLLSAKAAGEEATLAAAA-KQGFDPTV--EDVTARAREVESLRCALAARDVELESIIDATAGFGHHAV--------GL-----GGSGALRGALAAATEARRAGRLVAELEEECSSLKAKVKEEHADAHRLREALEQVRLAEQRATAAXXXXXXXXXXXXXXXXXXXXXXQDTGGGNDREGGHSAAEAQAMSK---RVQEAEDALQKALAGAQRAWGVVSSCL-SDDGSSRVDNDDGAVSTSTPPALPPAMASFLLWQHPASPVDPSLGALICGVEALAAAYRRRGHAARQATVAARAKAVCAREARRREEAEXXXXXXXXGRLEEAMIALDDCRRCHEQQQQQQTCWGVGRAADGPGPGGGMP--GDGGGGRSF-LSHEQEEHLRQIRSEVDRLEGQNRTLRRSLEGGSVGLIGKMTELYRETGDGNHG-DLPTQRLLFPPSLATGGDNTEEGGPRANLRASRWERAEG--LSGRGASASTPSPSPGRSWTAPSNIHA---RGSPCY------RRGGDGXXXXXXXXXXXXXXXXARVLEEFASCCAAPQDDGSGGTLVPVW 1888          
BLAST of mRNA_H-paniculata_contig22711.6051.1 vs. uniprot
Match: D8LQ82_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ82_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 8.770e-57
Identity = 276/703 (39.26%), Postives = 345/703 (49.08%), Query Frame = 0
Query:   71 QVEQQSLCRQIEDLQWELQNLKRRLEERERXXXXARTDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARESAA-------KEGGDHRAVLETEVRGREEAKAAVAAVEAAARDREATLTVALEKSIEELERXXXXXXXRRELSPNCRGMDKRSPEDTINIEEVQNRAKELESVKCSLAARDVELAAIADATAGFARQEVREPRGRGSGVGQVYGGGGPALRGALAAATDARCARRLVADLEEECSSLKDASTRARGDISRLRGELKVVKEEAVGAAEXXXXXXXXXTSRNVALSSSASAVGEQMGKTRDRALAAEEALEKALTGAQQAWRLMTSCLITES--GDDDIDADASISSTWYRQPRPA---IW-HPG--VDPYLWELVAGAEALTSAHRRRGCSLRRAQVTVRAKTACAREARRREXXXXXXXXXXXSRLRDAVAALDECEQ-HQD----------------------GGGSNEGRRHGGDESNGRFCGPSPGQQEHLRQIRREVDRLEGQNQHLRLSLVGDRL-----MRERSTSRGGGGR-KAPPQRTFFPK---LGSDTSADPG------VGRWECRPGERLSGSEGAVSLGSRSPTRSWNAGAKARCGAGQWSPVEDVDFAGREGPQGAASDTGGDRGFVESHATGLYD-----RTPQDDGSGGTVVPGW 715
            Q E Q L RQ+EDLQW+ + LKRR+EER+     AR +A                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  R+ AA       +  G+ R+ LE E R R    +A A  EA ARDR   L+ +L  +  E +          E +           +    +E+   RA+E+ES++C+LAARDVE+ +I DATAGF+   V        G+     GG  ALRGALAAAT+AR A RLVA+LEEECSSLK      R +  RLR  L    E+  G  +            +VA    A A+ +++ +T       E+AL+KAL G Q+AW +++SCL  +   G DD D   S ++     P  A   +W HP   VDP+L  L+ G EAL +A+RRRG + RRA V  RAK  CAREARRRE            RL +A+ ALD+C + H+                       GGG        GD   GR    S  Q+EHLRQIR EVDRLEGQNQ LR SL G  +     M E     GGG R   P QR  FP     G + + + G       GRWE   G  L G   + S  S SP RSW A +       + SP        R G                  A  L +       PQDDGSGGT+VPGW
Sbjct: 1107 QAELQRLRRQLEDLQWDTRTLKRRIEERDNQVRDARAEADGLKARSRTAERELGGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRDRAASAAAAAERSAGEQRSRLEQEGRDR---LSAAAXXEARARDRVTELSASLRAATAERDALLLSAKAAGEEAALAAAA---KQDFDPAVEDGTARAREVESLRCALAARDVEVESIIDATAGFSHHTV--------GL-----GGSGALRGALAAATEARRAGRLVAELEEECSSLKAKVKEERAESHRLREAL----EQDTGGGKDREGG------HSVA---EAQAMSKRVQET-------EDALQKALAGVQRAWGVVSSCLSDDDSRGVDDDDGAVSTATPPALPPAMASFLLWQHPASPVDPFLGALICGVEALAAAYRRRGHAARRATVAARAKAVCAREARRREEAAIRAREDAEGRLDEAMIALDDCRRCHEQXXXXXXXXXCWGVGRAADVPGPGGGMP------GDGGGGRSL-LSHEQEEHLRQIRSEVDRLEGQNQTLRRSLEGGSVRFIGKMTELYRETGGGNRGDLPTQRLLFPPSSATGGNNTEEGGPRANLRAGRWERADG--LCGRGASASTPSPSPGRSWTAPSNIHA---RGSPCYR-----RGGDXXXXXXXXXXXXXXXXXARVLKEFAGCCAAPQDDGSGGTLVPGW 1753          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22711.6051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQW2_9PHAE1.560e-6541.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ82_ECTSI8.770e-5739.26PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 559..579
NoneNo IPR availableCOILSCoilCoilcoord: 316..343
NoneNo IPR availableCOILSCoilCoilcoord: 205..225
NoneNo IPR availableCOILSCoilCoilcoord: 507..527
NoneNo IPR availableCOILSCoilCoilcoord: 74..122
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 73..569

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22711contigH-paniculata_contig22711:508..3502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22711.6051.1mRNA_H-paniculata_contig22711.6051.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22711 508..3502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22711.6051.1 ID=prot_H-paniculata_contig22711.6051.1|Name=mRNA_H-paniculata_contig22711.6051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=720bp
QGTVQEREEREQQCRDKVDRGLMRMERLKEENAFAAAAAVVSPSMSFGGS
SIRPPPSRRIQAPDLASYKYQVEQQSLCRQIEDLQWELQNLKRRLEERER
QLQEARTDADSLKTRSRGAERTLTAVRGEAEVAATEMAAEQRRAGVYRAE
VQVLRAELRAARESAAKEGGDHRAVLETEVRGREEAKAAVAAVEAAARDR
EATLTVALEKSIEELERRRRRERQRRELSPNCRGMDKRSPEDTINIEEVQ
NRAKELESVKCSLAARDVELAAIADATAGFARQEVREPRGRGSGVGQVYG
GGGPALRGALAAATDARCARRLVADLEEECSSLKDASTRARGDISRLRGE
LKVVKEEAVGAAETAAAAAASATSRNVALSSSASAVGEQMGKTRDRALAA
EEALEKALTGAQQAWRLMTSCLITESGDDDIDADASISSTWYRQPRPAIW
HPGVDPYLWELVAGAEALTSAHRRRGCSLRRAQVTVRAKTACAREARRRE
AREVRAREGAESRLRDAVAALDECEQHQDGGGSNEGRRHGGDESNGRFCG
PSPGQQEHLRQIRREVDRLEGQNQHLRLSLVGDRLMRERSTSRGGGGRKA
PPQRTFFPKLGSDTSADPGVGRWECRPGERLSGSEGAVSLGSRSPTRSWN
AGAKARCGAGQWSPVEDVDFAGREGPQGAASDTGGDRGFVESHATGLYDR
TPQDDGSGGTVVPGWHTGA*
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