prot_H-paniculata_contig22704.6046.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22704.6046.1
Unique Nameprot_H-paniculata_contig22704.6046.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length129
Homology
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Match: A0A6H5L0C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C0_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 1.300e-55
Identity = 93/122 (76.23%), Postives = 108/122 (88.52%), Query Frame = 0
Query:    1 RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVTAVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGAVVVAAILKTVGDIATNAVEELE 122
            R+QVE +L++NPKF A+DKAI KEGFK+ILLLRLSPIFPFALSNYLYGVT+V F EYMMGT+LGFFPGTLAYVYGG +GK +TDGGG+  LPWYGY AGA + A +LKTVG+IAT AVEE+E
Sbjct:  298 RQQVEGLLEENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGGT-GLPWYGYVAGAALTAYLLKTVGEIATAAVEEME 418          
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Match: A0A835ZF34_9STRA (Snare associated Golgi protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF34_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.060e-50
Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 0
Query:    1 RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVTAVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGAVVVAAILKTVGDIATNAVEELEPGIKED 128
            R+ VE +L DN KF AID AIG+EGFKIILLLRLSPIFPFA+SNYLYG+T+V F EY+  +MLGF PGT+AYVYGG    +L DGG    LPWYGYA G V VAA +K VGDIAT AV E+EPGI E+
Sbjct:   67 RKWVEELLGDNAKFKAIDSAIGREGFKIILLLRLSPIFPFAISNYLYGITSVPFWEYLGASMLGFLPGTIAYVYGGGQLGSLVDGGDGGGLPWYGYALGLVAVAATIKLVGDIATKAVAEIEPGIMEE 194          
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Match: A0A7S1FUG6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUG6_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.030e-42
Identity = 79/122 (64.75%), Postives = 92/122 (75.41%), Query Frame = 0
Query:    1 RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVTAVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGAVVVAAILKTVGDIATNAVEELE 122
            R  VE IL+DNP+F A+D AIGKEGFK++LLLRLSPIFPFALSNYLYGVT+V F  Y  GTMLGF PGTLAYVY G  GKALT   G M+ PWY YA G  + A  +K + DIAT  +E++E
Sbjct:  100 RGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAG-MAAPWYIYAGGLALGACGIKIIADIATRTIEDME 220          
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Match: K0R4C6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4C6_THAOC)

HSP 1 Score: 151 bits (382), Expect = 2.440e-42
Identity = 71/122 (58.20%), Postives = 94/122 (77.05%), Query Frame = 0
Query:    1 RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVTAVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGAVVVAAILKTVGDIATNAVEELE 122
            R  VE +L +NPKF ++D+AI KEGFK+++LLRLSP+FPFALSNYLYG +++ FP Y  GT+LGF PGT AYVYGG+IGK LT GG S   PWY YA G  V+  ++K +GD+AT+ ++ +E
Sbjct:  223 RGYVEDVLDENPKFRSMDRAIEKEGFKLMVLLRLSPLFPFALSNYLYGASSIRFPSYFFGTILGFAPGTFAYVYGGVIGKELTVGGDSAQ-PWYVYAGGMAVIVGLIKVIGDVATSVIDAME 343          
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Match: A0A7S4I716_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I716_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.750e-41
Identity = 77/122 (63.11%), Postives = 91/122 (74.59%), Query Frame = 0
Query:    1 RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVTAVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGAVVVAAILKTVGDIATNAVEELE 122
            R  VES+L+D PKF  IDKAIG+EGFK++LLLRLSPIFPFALSNYLYG T++GF  Y  GTMLGF PGT+AYVY G IGKALT    +   PWY YA G  ++A  LK V D+AT  +E L+
Sbjct:  255 RTYVESVLEDYPKFKKIDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSIGFWPYFFGTMLGFTPGTIAYVYTGEIGKALTLDSATAE-PWYVYAGGMTLLAGCLKVVADVATGIIENLD 375          
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Match: A0A7S1FUT1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUT1_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.080e-41
Identity = 79/122 (64.75%), Postives = 92/122 (75.41%), Query Frame = 0
Query:    1 RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVTAVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGAVVVAAILKTVGDIATNAVEELE 122
            R  VE IL+DNP+F A+D AIGKEGFK++LLLRLSPIFPFALSNYLYGVT+V F  Y  GTMLGF PGTLAYVY G  GKALT   G M+ PWY YA G  + A  +K + DIAT  +E++E
Sbjct:  238 RGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAG-MAAPWYIYAGGLALGACGIKIIADIATRTIEDME 358          
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Match: A0A7R9WSQ0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSQ0_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.050e-40
Identity = 69/122 (56.56%), Postives = 89/122 (72.95%), Query Frame = 0
Query:    1 RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVTAVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGAVVVAAILKTVGDIATNAVEELE 122
            R  VE +LQD PKF  IDKAIGKEGFK++ LLRLSP+FPFALSNYLYG +++ F  +  GT+LGF PGT+AYVY G +GKALT  G  +  PWY Y  G  +++ ++K + D AT  V+EL+
Sbjct:   34 RDYVEGVLQDFPKFAKIDKAIGKEGFKLMFLLRLSPVFPFALSNYLYGASSINFSAFFWGTLLGFAPGTMAYVYTGYVGKALTTEGSEV-YPWYFYVGGLALLSGLIKVLADTATRIVDELD 154          
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Match: A0A448YYH2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYH2_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.530e-40
Identity = 72/122 (59.02%), Postives = 89/122 (72.95%), Query Frame = 0
Query:    1 RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVTAVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGAVVVAAILKTVGDIATNAVEELE 122
            R  VE +L++NP+F  +DKAIG+EGFK++LLLRLSPIFPFALSNYLYG T++ F  +  GT+LGF PGT+AYVY G +GKALT   G  + PWY Y  G  + AA LK V D AT  V E+E
Sbjct:  270 REYVEGLLEENPRFGKLDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSINFSAFFGGTLLGFAPGTIAYVYTGYVGKALTGDAGGDAYPWYVYGGGLALFAAFLKVVADEATRVVREIE 391          
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Match: A0A7R9WRQ5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRQ5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.460e-39
Identity = 69/122 (56.56%), Postives = 89/122 (72.95%), Query Frame = 0
Query:    1 RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVTAVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGAVVVAAILKTVGDIATNAVEELE 122
            R  VE +LQD PKF  IDKAIGKEGFK++ LLRLSP+FPFALSNYLYG +++ F  +  GT+LGF PGT+AYVY G +GKALT  G  +  PWY Y  G  +++ ++K + D AT  V+EL+
Sbjct:  145 RDYVEGVLQDFPKFAKIDKAIGKEGFKLMFLLRLSPVFPFALSNYLYGASSINFSAFFWGTLLGFAPGTMAYVYTGYVGKALTTEGSEV-YPWYFYVGGLALLSGLIKVLADTATRIVDELD 265          
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Match: A0A7S3P4C7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4C7_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.240e-37
Identity = 63/127 (49.61%), Postives = 92/127 (72.44%), Query Frame = 0
Query:    1 RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVTAVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGAVVVAAILKTVGDIATNAVEELEPGIKE 127
            R  VE +L++NP+F  +DKAIGKEGFK+++L+RL+PIFPF++SNY+YG +A+ F  Y  GT+LGF PG++AYVY GM+G+A+  G G    PWY YA G + +  +LK + D AT  V  +E  +++
Sbjct:    6 RGAVEGLLEENPEFRKLDKAIGKEGFKLLVLVRLTPIFPFSISNYIYGASAIKFWPYFWGTVLGFAPGSVAYVYTGMVGQAVMTGKGDQ--PWYFYAGGLLALGTLLKMITDTATGIVRSMEDDMED 130          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22704.6046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0C0_9PHAE1.300e-5576.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZF34_9STRA1.060e-5067.97Snare associated Golgi protein-domain-containing p... [more]
A0A7S1FUG6_9STRA1.030e-4264.75Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
K0R4C6_THAOC2.440e-4258.20Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4I716_9STRA2.750e-4163.11Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S1FUT1_9STRA3.080e-4164.75Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7R9WSQ0_9STRA2.050e-4056.56Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A448YYH2_9STRA3.530e-4059.02Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7R9WRQ5_9STRA4.460e-3956.56Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S3P4C7_9STRA1.240e-3749.61Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032816SNARE associated Golgi proteinPFAMPF09335SNARE_assoccoord: 3..76
e-value: 1.6E-14
score: 54.4
NoneNo IPR availablePANTHERPTHR46826:SF1coord: 1..125
NoneNo IPR availablePANTHERPTHR46826FAMILY NOT NAMEDcoord: 1..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 29..51
NoneNo IPR availableTMHMMTMhelixcoord: 85..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22704contigH-paniculata_contig22704:220..2201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22704.6046.1mRNA_H-paniculata_contig22704.6046.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22704 220..2201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22704.6046.1 ID=prot_H-paniculata_contig22704.6046.1|Name=mRNA_H-paniculata_contig22704.6046.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp
RRQVESILQDNPKFMAIDKAIGKEGFKIILLLRLSPIFPFALSNYLYGVT
AVGFPEYMMGTMLGFFPGTLAYVYGGMIGKALTDGGGSMSLPWYGYAAGA
VVVAAILKTVGDIATNAVEELEPGIKED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032816SNARE_assoc