mRNA_H-paniculata_contig2270.6044.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2270.6044.1
Unique NamemRNA_H-paniculata_contig2270.6044.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Match: D8LCR7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCR7_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 1.060e-108
Identity = 187/246 (76.02%), Postives = 199/246 (80.89%), Query Frame = 1 
Query:  115 MKVLSTVSAMTACASCATAFVTPS-FSQNALRMQQQAVSQSRAATP-LRMAEGPPAEVAEEVAEDPEPTPVVPKVEMSASIPFLTRPKNLDGMVGDIGFDPLGLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDAMAAVGPSPMLQIFCFCGFLEWRFHKGKMTMDNMHEDGAEPGAFGFDPLKLDNKDAAVREKYQLQEIKNGRLAMSAIGGLIHQSLLLHGGVPFHA 846
            MKV+STV A  ACASCA+AFV PS FS+         +S S AA+  LRMAE   AE   E A +PEP P  P   MSASIPFL +PKNL+GMVGDIGFDP G ATIFPVKFMREAE+KHGRVAMLAVVGWLVSEVVH+PG AYMSENPVDAMAAVGP PMLQIF FCGFLEW+FH GKMTMDNMHEDG EPG FGFDP+ L  K A VREKYQLQEIKNGRLAMSAIGGLIHQSLLL GGVPFHA
Sbjct:    1 MKVISTVGAGLACASCASAFVAPSSFSR--------VISSSPAASKALRMAEEVAAEP--EAAVEPEPVPAGPA--MSASIPFLEQPKNLEGMVGDIGFDPFGFATIFPVKFMREAELKHGRVAMLAVVGWLVSEVVHVPGAAYMSENPVDAMAAVGPGPMLQIFLFCGFLEWKFHNGKMTMDNMHEDGNEPGDFGFDPMMLAKKPADVREKYQLQEIKNGRLAMSAIGGLIHQSLLLGGGVPFHA 234
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BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Match: A0A835Z4D2_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D2_9STRA)

HSP 1 Score: 223 bits (567), Expect = 7.750e-66
Identity = 107/169 (63.31%), Postives = 131/169 (77.51%), Query Frame = 1 
Query:  337 MSASIPFLTRPKNLDGMVGDIGFDPLGLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDAMAAVGPSPMLQIFCFCGFLEWRFHKGKMTMDNMHEDGAEPGAFGFDPLKLDNKDAAVREKYQLQEIKNGRLAMSAIGGLIHQSLLLHGGVPFH 843
            MS S+PFL +PK LDG VG+  FDP  L+ + P+ F+RE+E+KHGR+AMLAVVG++VSE++H+PG AY + NPVDA+  VG  PMLQIF FCGFLE  FHKGKMTM +MH DG  PG FGFDPL + +KD A   +YQL EIKNGRLAM AI GLIHQS++   GVPF+
Sbjct:    1 MSKSLPFLVKPKQLDGWVGNAEFDPFSLSELLPMAFVRESELKHGRIAMLAVVGFVVSELIHIPGEAYQASNPVDAVNMVGAQPMLQIFAFCGFLESVFHKGKMTMMDMHADGQTPGDFGFDPLNV-SKDPAKLAQYQLSEIKNGRLAMMAISGLIHQSIITGHGVPFN 168
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BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Match: A0A6V1U3D5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U3D5_HETAK)

HSP 1 Score: 201 bits (512), Expect = 7.330e-58
Identity = 99/162 (61.11%), Postives = 122/162 (75.31%), Query Frame = 1 
Query:  337 MSASIPFLTRPKNLDGMVGDIGFDPLGLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDAMAAVGPSPMLQIFCFCGFLEWRFHKGKMTMDNMHEDGA-EPGAFGFDPLKLDNKDAAVREKYQLQEIKNGRLAMSAIGGLIHQSLL 819
            MS S+PFL  PKN  GM+GD GFDP G +  F +K+MREAE+KHGRV+MLAVVG+LVS+ VHLPGPAY S NP+DA++ VGP P+ QIF FCGFLE+  +KGKMTM +M ED   +PG  GFDP+ L        E+ QL+E++NGRLAM AIGGL+H  LL
Sbjct:    1 MSKSMPFLAAPKNTAGMIGDKGFDPFGFSDDFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIDALSMVGPQPLAQIFLFCGFLEFTMNKGKMTMLDMFEDKERKPGFLGFDPMNLGK--GGPSEEMQLKELENGRLAMCAIGGLVHHFLL 160
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BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Match: W7TJ16_9STRA (Light-harvesting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ16_9STRA)

HSP 1 Score: 196 bits (498), Expect = 4.540e-54
Identity = 98/166 (59.04%), Postives = 121/166 (72.89%), Query Frame = 1 
Query:  325 PKVEMSASIPFLTRPKNLDGMVGDIGFDPLGLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDAMAAVGPSPMLQIFCFCGFLEWRFHKGKMTMDNMHEDGA-EPGAFGFDPLKLDNKDAAVREKYQLQEIKNGRLAMSAIGGLIHQSLL 819
            P+   S S+PFL +PKNLDGMVGD+GFDPLGLA    ++++REAE+K+GRVAMLA +G++V E + LPG  Y   N V A   VGP P++QIF FCGFLE+  HKGKMT  +M  DG  EPG FGFDPL    KD + RE+  L E+KNGRLAM AIGGLIH +L+
Sbjct:  123 PQPVFSKSVPFLLKPKNLDGMVGDVGFDPLGLAEYVDIRWLREAELKNGRVAMLAFLGFVVQEFIRLPGDLYSEPNGVKAFFQVGPQPLIQIFLFCGFLEFTLHKGKMTQMDMFADGKREPGNFGFDPLGF-GKDPSKRERLALAELKNGRLAMIAIGGLIHHALV 287
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BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Match: A0A7S0T6N2_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6N2_9RHOD)

HSP 1 Score: 175 bits (443), Expect = 2.810e-47
Identity = 94/173 (54.34%), Postives = 116/173 (67.05%), Query Frame = 1 
Query:  319 VVPKVEMSASIPFLTRPKNLD-GMVGDIGFDPLGLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDAMAAVGPSPMLQIFCFCGFLEWRFHKGKMTMDNMHEDGAEPGAFGFDPLKLDNKDAAVREKYQLQEIKNGRLAMSAIGGLIHQSLLLHGGV 834
            VV   E SAS+PFL++P N+D  MVG  GFDPLGL+T    +F++E+EIKHGR+ MLAVVG+LV EVVHLPG  + ++   +A + V    + QIF  CG  E+  HKGKMT  ++  D   PGA GFDPL L  KD    +K+QL EIKNGRLAM AIGG IHQ  L   GV
Sbjct:   27 VVMMAEKSASVPFLSKPANIDESMVGYTGFDPLGLSTYLSARFLQESEIKHGRICMLAVVGFLVQEVVHLPGEVFSAKLATEAFSKVPTGGLWQIFIACGVAEYIGHKGKMTYMDISADKGTPGAMGFDPLNL-GKDPEKFKKFQLNEIKNGRLAMIAIGGFIHQMWLTKQGV 198
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BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Match: A0A7S4DC05_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DC05_HETAK)

HSP 1 Score: 172 bits (436), Expect = 1.040e-46
Identity = 81/129 (62.79%), Postives = 101/129 (78.29%), Query Frame = 1 
Query:  331 VEMSASIPFLTRPKNLDGMVGDIGFDPLGLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDAMAAVGPSPMLQIFCFCGFLEWRFHKGKMTMDNMHEDGA-EPGAFGFDPLKL 714
            +EMS S+PFL  PKN  GM+GD GFDP G +  F +K+MREAE+KHGRV+MLAVVG+LVS+ VHLPGPAY S NP++A++ VGP P+ QIF FCGFLE+  +KGKMTM +M ED   +PG  GFDP+ L
Sbjct:   43 MEMSKSMPFLAAPKNTAGMIGDKGFDPFGFSDTFDIKWMREAELKHGRVSMLAVVGFLVSQAVHLPGPAYQSTNPIEALSMVGPQPLAQIFLFCGFLEFTQNKGKMTMLDMFEDKERKPGFLGFDPMNL 171
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BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Match: M2VTV2_GALSU (Light-harvesting complex protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTV2_GALSU)

HSP 1 Score: 172 bits (437), Expect = 3.370e-46
Identity = 87/167 (52.10%), Postives = 116/167 (69.46%), Query Frame = 1 
Query:  340 SASIPFLTRPKNLDGMV-GDIGFDPLGLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDAMAAVGPSPMLQIFCFCGFLEWRFHKGKMT-MDNMHEDGAEPGAFGFDPLKLDNKDAAVREKYQLQEIKNGRLAMSAIGGLIHQSLLLHGGV 834
            S S+PFL RPKNLDG   GD+GFDPL ++ +  ++++RE+EIKHGR+ MLA VG++V E VHLPG  + ++  +DA+  V    + QIF F G LE+  +KGKMT +D   +   +PG FGFDPL L  KD   R++Y++ EIKNGRLAM A+GG IH  LL H GV
Sbjct:   49 SLSVPFLERPKNLDGTAPGDVGFDPLYISDLLDIQWLRESEIKHGRICMLAAVGFIVQEFVHLPGEVFSNKVAIDALFQVPSGGLWQIFLFIGLLEFVMNKGKMTPLDMFSDPNRKPGDFGFDPLGL-GKDPQARKRYEVAEIKNGRLAMLAVGGFIHHMLLTHQGV 214
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BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Match: Q9FDZ6_GALSU (Light-harvesting protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=Q9FDZ6_GALSU)

HSP 1 Score: 170 bits (430), Expect = 3.540e-45
Identity = 87/167 (52.10%), Postives = 114/167 (68.26%), Query Frame = 1 
Query:  340 SASIPFLTRPKNLDGMV-GDIGFDPLGLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDAMAAVGPSPMLQIFCFCGFLEWRFHKGKMT-MDNMHEDGAEPGAFGFDPLKLDNKDAAVREKYQLQEIKNGRLAMSAIGGLIHQSLLLHGGV 834
            S S+PFL RP+NLDG   GD+GFDPL ++ +  ++++RE+EIKHGR+AMLA +G++V E VHLPG  + ++  VDA   V    + QIF F G LE+  +KGKMT +D   +   +PG FGFDPL L  KD   R +YQ+ EIKNGRLAM A+GG IH   L H GV
Sbjct:   48 SPSVPFLERPQNLDGTAPGDVGFDPLYISDLLDIQWLRESEIKHGRIAMLAALGFIVQEFVHLPGQVFSNKVAVDAFFQVPRGGLWQIFLFIGLLEFVMNKGKMTPLDMFSDPNRKPGDFGFDPLGL-GKDPQTRRRYQVAEIKNGRLAMLAVGGFIHHMFLTHQGV 213
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BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Match: B7FUM6_PHATC (Protein fucoxanthin chlorophyll a/c protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUM6_PHATC)

HSP 1 Score: 163 bits (412), Expect = 5.320e-43
Identity = 87/162 (53.70%), Postives = 113/162 (69.75%), Query Frame = 1 
Query:  334 EMSASIPFLTRPKNLDGMVGDIGFDPLGLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDAMAAVGPSPMLQIFCFCGFLEWRFHKGKMTMDNMHEDGA-EPGAFGFDPLKLD-NKDAAVREKYQLQEIKNGRLAMSAIGGLIHQS 813
            EMS S+PFLT PKN  G VGD+GFDPLG +  F +K++RE+EIKHGR AMLA VG+++ +   LPG  ++ ++ + A  A G SPMLQI    G LEW  +KGK+TM++M  D + EPG  GFDP+ +  NK     E  QL+EIKNGRLAM AIGG+IH +
Sbjct:   32 EMSKSMPFLTAPKNTGGYVGDVGFDPLGFSDNFDMKWLRESEIKHGRAAMLATVGFVMQQFWTLPGMVHVDDSNL-APGAAGISPMLQIVFGMGALEWWTNKGKVTMEDMFSDSSREPGNLGFDPMGMSKNKSKEEAEAMQLKEIKNGRLAMLAIGGMIHHN 192
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BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Match: A0A1X6NTR2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTR2_PORUM)

HSP 1 Score: 163 bits (412), Expect = 8.340e-43
Identity = 81/163 (49.69%), Postives = 107/163 (65.64%), Query Frame = 1 
Query:  340 SASIPFLTRPKNLDG-MVGDIGFDPLGLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDAMAAVGPSPMLQIFCFCGFLEWRFHKGKMTMDNMHEDGAEPGAFGFDPLKLDNKDAAVREKYQLQEIKNGRLAMSAIGGLIHQSLLLH 825
            SAS+PFL +P   DG M GD+GFDPL L+    +K++RE E+K+GRVAMLA +G LV E VHLP P + +    DA   V    + Q+F  CG  E+  H+GK++ D+M EDG  PG FGFDPL L     A ++K +L E+KNGRLAM  IGG+IH + + H
Sbjct:   35 SASVPFLPQPAACDGSMAGDVGFDPLNLSGFIDIKWLREGELKNGRVAMLAFLGVLVQEFVHLPSPLFANPVATDAFFQVPAGGLWQVFLACGLCEFVSHRGKLSYDDMFEDGRIPGNFGFDPLGLYKGTPAQKKKLELAEVKNGRLAMIGIGGVIHSNFIYH 197
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2270.6044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCR7_ECTSI1.060e-10876.02Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A835Z4D2_9STRA7.750e-6663.31Chlorophyll a/b-binding protein domain-containing ... [more]
A0A6V1U3D5_HETAK7.330e-5861.11Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
W7TJ16_9STRA4.540e-5459.04Light-harvesting protein n=1 Tax=Nannochloropsis g... [more]
A0A7S0T6N2_9RHOD2.810e-4754.34Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S4DC05_HETAK1.040e-4662.79Hypothetical protein (Fragment) n=3 Tax=Heterosigm... [more]
M2VTV2_GALSU3.370e-4652.10Light-harvesting complex protein n=1 Tax=Galdieria... [more]
Q9FDZ6_GALSU3.540e-4552.10Light-harvesting protein n=1 Tax=Galdieria sulphur... [more]
B7FUM6_PHATC5.320e-4353.70Protein fucoxanthin chlorophyll a/c protein n=3 Ta... [more]
A0A1X6NTR2_PORUM8.340e-4349.69Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2270contigH-paniculata_contig2270:5987..10363 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.7
Seed ortholog evalue3.4e-92
Seed eggNOG ortholog2880.D8LCR7
Preferred nameLhcr1
KEGG koko:K08907,ko:K08910
KEGG Pathwayko00196,map00196
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2D9V2@1,2S5EH@2759
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-03_001900.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons2
Model size1935
Cds size735
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2270.6044.1prot_H-paniculata_contig2270.6044.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2270 6101..9277 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929631.27168-UTR-H-paniculata_contig2270:5986..61001622929631.27168-UTR-H-paniculata_contig2270:5986..6100Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2270 5987..6100 +
1691480943.6434517-UTR-H-paniculata_contig2270:5986..61001691480943.6434517-UTR-H-paniculata_contig2270:5986..6100Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2270 5987..6100 +
1622929631.3199675-UTR-H-paniculata_contig2270:9277..103631622929631.3199675-UTR-H-paniculata_contig2270:9277..10363Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2270 9278..10363 +
1691480943.6748924-UTR-H-paniculata_contig2270:9277..103631691480943.6748924-UTR-H-paniculata_contig2270:9277..10363Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2270 9278..10363 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929631.2890682-CDS-H-paniculata_contig2270:6100..66251622929631.2890682-CDS-H-paniculata_contig2270:6100..6625Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2270 6101..6625 +
1691480943.655494-CDS-H-paniculata_contig2270:6100..66251691480943.655494-CDS-H-paniculata_contig2270:6100..6625Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2270 6101..6625 +
1622929631.305313-CDS-H-paniculata_contig2270:9067..92771622929631.305313-CDS-H-paniculata_contig2270:9067..9277Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2270 9068..9277 +
1691480943.6653845-CDS-H-paniculata_contig2270:9067..92771691480943.6653845-CDS-H-paniculata_contig2270:9067..9277Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2270 9068..9277 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2270.6044.1

>prot_H-paniculata_contig2270.6044.1 ID=prot_H-paniculata_contig2270.6044.1|Name=mRNA_H-paniculata_contig2270.6044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp
MKVLSTVSAMTACASCATAFVTPSFSQNALRMQQQAVSQSRAATPLRMAE
GPPAEVAEEVAEDPEPTPVVPKVEMSASIPFLTRPKNLDGMVGDIGFDPL
GLATIFPVKFMREAEIKHGRVAMLAVVGWLVSEVVHLPGPAYMSENPVDA
MAAVGPSPMLQIFCFCGFLEWRFHKGKMTMDNMHEDGAEPGAFGFDPLKL
DNKDAAVREKYQLQEIKNGRLAMSAIGGLIHQSLLLHGGVPFHA*
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mRNA from alignment at H-paniculata_contig2270:5987..10363+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2270.6044.1 ID=mRNA_H-paniculata_contig2270.6044.1|Name=mRNA_H-paniculata_contig2270.6044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4377bp|location=Sequence derived from alignment at H-paniculata_contig2270:5987..10363+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGACTGCTGTGGCAAACGACCTCCGCGAAGACAGACAGTGTTACAGCAGA
CAGTACTGTAACCACCCCCAACCCTGCGCAGAGTATCAACGCGAGAATCA
AAAGCACGGTAAACATGAAGGTTCTTTCTACCGTAAGCGCCATGACTGCG
TGTGCATCGTGCGCGACCGCGTTCGTAACCCCTTCGTTTTCGCAAAACGC
GTTGAGGATGCAGCAGCAGGCCGTCTCGCAGTCGCGGGCGGCCACTCCTC
TCCGCATGGCGGAGGGGCCTCCTGCGGAAGTTGCGGAGGAGGTAGCGGAA
GACCCTGAGCCCACTCCAGTCGTCCCCAAGGTCGAGATGTCGGCCTCAAT
CCCCTTCTTGACGAGGCCCAAGAACCTGGATGGTATGGTGGGTGACATCG
GGTTCGACCCTTTGGGGTTGGCCACGATTTTCCCAGTCAAGTTCATGCGT
GAGGCCGAGATCAAGCATGGACGCGTTGCGATGCTCGCGGTTGTGGGTTG
GCTAGTTTCGGAAGTTGTGCACCTCCCCGGACCAGCGTACATGTCGGAAA
ACCCCGTGGACGCTATGGCCGCAGTGGGACCCAGCCCGATGTTGCAGATC
TTCTGCTTCTGTGGCTTCCTTGAGTGGAGGTTCCACAAGGTGTGTGCGTA
TGTCTTGGTAATTATTAGAAAAACGTACTTGGTATGTGGGAGAAACATGA
CAAGAAACATGTACGAGATATGCGGCAATTGGTTTCCTCCTTTCTGTTTT
TTACGTGAGATACTTGTGTCGGGTGTACTTGCCGAATATTTTACAACAGC
AGATTAGCAAAGAAGGAGGTCTGCTGCGTATCTGGATTTGATTAGGGAGC
ACCTTTCGTCTTACGCTTCTGGTTTTTGTGTGGTGTTGCTCCTTTGTTCA
TATACTCACGTGTTACCTCTGCAGCAGGGAGTCAGCCTACTATACTTCTC
CCTCATTCCATGTCAACTTTACTCGGTTCGTGTTGTGTACTCATTCACTT
GCTGCAGTATAGTTTTTGTTCATCAAAGATCGCAAGCGAGCGTCCCATCT
GCATAGCAAAATCAGTTAGAGCAGCAGACACCACGCGGGTATTATACATT
TAGCTTGTCGCACTACTTAACGTGAAACCTTTCGCTCTTGGCACCTCGTG
TCTGCAGCCGTGGAAACATCCTGGTTAGTTTGCTCTGCACGACAAAGCAA
GTGAAAACATGAAGTACGTTTTGTGCTGTTGGGTCATATGCCAATCATGT
GACGTACTCCCGTTCTTCAACTACTCGAGTTGTTTTACAGAACGCGGTGT
CTGTTAGAAGTCCTATTCCAACTTTTAATGTAGTACATGGCAAAACGAGT
CAAAAACATGACCAGGGCATGTGATATATTTTGATTTTCCTTGATTCTTC
TTGAAATGATATGCTCTGGGTACCAAGCACTATTGAAGGACATGGCTTTG
AAAATATGAGCATTGCTCTGTATTGTGGGTAAAATTCTCAGAAGGTGTAC
ATCGAGTTGCATACTGTAGCGCCACTGAACACGTTTTTTGGCAGGATTCA
AGCATGAAGCGACGGGTTGCTCACAGGGCCCATACTCGAAATCTTACCCG
ACGATAGTCGTCGGCAGCACTTTCTTCTCGCTTTTTAATGAAGAAATAGT
GTTGGACCACCATTTGAGTTCCTTTTCTTAGACAAGGTCTATTTGTGACA
TTTTCCACCACTGTGTTGCTTGTGCGCAGGTCCTTACTGTAGTTGTTCAT
GAGACGATGGTTACCTCGCCTTCCTAGTCCAGACAGTATGTAGTCATTGT
GCTCCATGATACCAGGTACTATACTGTCCGTCTGTGCAGGACTAAGGACA
GCGGGACAGTGGGTTATCACCTAGCACAGCCACATCCTGTGCCTTGGTTC
GTATACGCCAGTTGTTTGCAGCTCTGGAAGTCAACATGAGTCGCATATGC
GTACTATCTTCGATCAACCACTTCCCTGATATTCAGGATACGCTCCATAC
TCTTATAGTAGCCGAGATGACTCGTAAAGGCGTCCGCACGTGTACCAAAC
CAGCGATTCTCCTCAGTGGCCTTAGACTTAATTCATCTACGCCACTCCAC
TGCCATGATACGACCAATTCCTAGGCACACGAATGAACAGTGAGCTGTGG
AGAAGGGTTCTCGAAGATGGGGAATAAGGACAGGCCTTTAGCATTAAGAT
GCATGGTACCCTGGGTCCCGAATATACTATGGTCGAGTTGAACGGGTAGG
AAGTGCAAGGTCCGATAAATTAATAACGATCACCTTCCAACGAGATTCTT
GATGATTCGCTCGGTAGTCTGAAAGCTTCGGGTGTCGTCCGCAGAGTAAA
CGCCGACATTTTTCTTCACGTATCGCGCCTATTCCTGACGACCCCCAAAT
TTTGCACCAGTAGTTAACGCTCCTTGGTGTGTACCCCGCTACAACGAGTA
AAAGGTCTTGTGGGATCGCAGTACACCGATGAAAATATTCTCGAAACTTA
TTGGGGTGTTGTATGTGGAGCGCAGCATATGAGTACCGGGTTTTTTTACC
TTGTACCCGGGTGTCCTCTTGGCATGTTTTATATATTTTGCCTTGCCCTG
TCTCCAACAAATGTGACGCCTTTACGTCTGTCGATGGAAGCGCGTGTGCC
CGAAAGCGCAAGTTTTAAGAAACTGTGAGCTCCGTCAATCAACGTGTTTT
GCCTCCCCTTGACGTCGTTCGTGAGAAGTGTTTAGCGTAGATCTTGGGCA
GTGGCCAAGACAAGTGGCCACTCGTCCCGTTTTCTTGTGTTATTTTGAAC
GAATCCGTTCACCAGGTTTGACTTCGTTTGCTGGTACCCCAATTTCAGGG
TTGCGCATTTCAGAGGGACACGATCTTTCACCAATTAAAATCTAACCGGA
AAGTACCCCGCTTCTACTAGGAACGTCTCCTCGCGTTGTTTATTTGGCGC
AACCGAAGATGACTATATCCGCCCAGATAGATCGCCCTTCCGCCTTATTT
GAACAAGTTTTGCCCATAAATATATACAATTGCAGATTAAACTCCCCTCT
TCCCTCTCTCTCTACTTCCTTTGTGTACCAGGGCAAGATGACGATGGATA
ACATGCACGAGGACGGGGCCGAGCCCGGAGCGTTCGGCTTCGACCCGCTT
AAGCTTGACAACAAGGACGCCGCAGTGCGCGAGAAGTACCAATTGCAGGA
GATAAAGAATGGGCGCCTGGCCATGTCGGCTATCGGTGGGCTTATCCACC
AGTCTCTTCTTCTCCACGGCGGCGTGCCGTTCCACGCGTAGATCGGCAAC
CCGTTGTGCGAAATGGAGGGGTGATACGGGATTTTTTTAGTCTTTTCTTC
TCCTATTGGGCATTCCTTGCCGATGAAAGCCTTTACGAAGATGGCACGGT
AGATGGGATTGAGGGCGTAGATATAGGATGCAGCTACATAAAATAATCTC
GACTATTCAATGAAGTGAAAAAGTTGGGGATGGGATGTCGTCGCATGTGC
CCTCCGTTACTGTACGTGGTCGGCTGTTGATGGGCAAGATAGCTTGTCGT
TGGTCGGTTAATGAACACCTGTAGAATTGTGCTGCCGAGCCCCCTCCACC
CCGTGTCACGCACGATTCACACCTTTGTTTTTTAGTTTTGCCTGTGCTCC
TCCAATCCTGGTCGATTTTGAATGAGAAGCCTCGATTGTCACGTGCTCAT
GCTATGACTTGGACGGATTGGTCAATGCACGTGGTTGCCCCCTCTGGCAA
AGCAGAGAAACATATGGTCAACGTAGCTACATATTTCCCTCCGTCACTAG
TCTTAGTCTTGGCCTCACGTGTCGCCGACGGCATGTTAAAGTCCCCACGA
TTTGGAGAGCGCAGTTCTTCCGCTTGGCTTAAATTTCGTCTCTAGCGCAC
GTTGGTGGCTACGGTTGTGGCCGGGCGAGACGACATGAAGGGCGTAATTT
TTCCAGGAGTCTTGCATCTTGCGCCAATGCCGAAGTTTTGGTGCTTGATG
GATGGTGTTCGTTTACGAAGGTCGTGTCTAATTTATTTTTGCCATACCTG
TGCAGTAGTAAAATACATTGAGGAGGCATGCTTCCCGGAATCAAGTCGCA
TAGACTAATTTAAGCAGATGAGGGGTGATGCAATGCCTCTTCACTGCGCT
TAGAACACGCCACCTAGCCTTGTTTGATACTTGACAGGCGTTTTTGTTCG
ATGTAGGCTCGTTAACTATGAGTATATCCCAGGGCAAAGTGAGCCATAAT
ATATGCTTCACTATCAACACGTAATCCCACATTGTCTGGATTATATCACT
ACGGCTGTTGTACGTCACTCTGGAAGTCGACTCAAAAGAACTCTTAACGA
AAAATGCCAAATACACATGCGTCGAGC
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Coding sequence (CDS) from alignment at H-paniculata_contig2270:5987..10363+

>mRNA_H-paniculata_contig2270.6044.1 ID=mRNA_H-paniculata_contig2270.6044.1|Name=mRNA_H-paniculata_contig2270.6044.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig2270:5987..10363+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGGTTCTTTCTACCGTAAGCGCCATGACTGCGTGTGCATCGTGCGC
GACCGCGTTCGTAACCCCTTCGTTTTCGCAAAACGCGTTGAGGATGCAGC
AGCAGGCCGTCTCGCAGTCGCGGGCGGCCACTCCTCTCCGCATGGCGGAG
GGGCCTCCTGCGGAAGTTGCGGAGGAGGTAGCGGAAGACCCTGAGCCCAC
TCCAGTCGTCCCCAAGGTCGAGATGTCGGCCTCAATCCCCTTCTTGACGA
GGCCCAAGAACCTGGATGGTATGGTGGGTGACATCGGGTTCGACCCTTTG
GGGTTGGCCACGATTTTCCCAGTCAAGTTCATGCGTGAGGCCGAGATCAA
GCATGGACGCGTTGCGATGCTCGCGGTTGTGGGTTGGCTAGTTTCGGAAG
TTGTGCACCTCCCCGGACCAGCGTACATGTCGGAAAACCCCGTGGACGCT
ATGGCCGCAGTGGGACCCAGCCCGATGTTGCAGATCTTCTGCTTCTGTGG
CTTCCTTGAGTGGAGGTTCCACAAGATGAAGGTTCTTTCTACCGTAAGCG
CCATGACTGCGTGTGCATCGTGCGCGACCGCGTTCGTAACCCCTTCGTTT
TCGCAAAACGCGTTGAGGATGCAGCAGCAGGCCGTCTCGCAGTCGCGGGC
GGCCACTCCTCTCCGCATGGCGGAGGGGCCTCCTGCGGAAGTTGCGGAGG
AGGTAGCGGAAGACCCTGAGCCCACTCCAGTCGTCCCCAAGGTCGAGATG
TCGGCCTCAATCCCCTTCTTGACGAGGCCCAAGAACCTGGATGGTATGGT
GGGTGACATCGGGTTCGACCCTTTGGGGTTGGCCACGATTTTCCCAGTCA
AGTTCATGCGTGAGGCCGAGATCAAGCATGGACGCGTTGCGATGCTCGCG
GTTGTGGGTTGGCTAGTTTCGGAAGTTGTGCACCTCCCCGGACCAGCGTA
CATGTCGGAAAACCCCGTGGACGCTATGGCCGCAGTGGGACCCAGCCCGA
TGTTGCAGATCTTCTGCTTCTGTGGCTTCCTTGAGTGGAGGTTCCACAAG
GGCAAGATGACGATGGATAACATGCACGAGGACGGGGCCGAGCCCGGAGC
GTTCGGCTTCGACCCGCTTAAGCTTGACAACAAGGACGCCGCAGTGCGCG
AGAAGTACCAATTGCAGGAGATAAAGAATGGGCGCCTGGCCATGTCGGCT
ATCGGTGGGCTTATCCACCAGTCTCTTCTTCTCCACGGCGGCGTGCCGTT
CCACGCGTAGGGCAAGATGACGATGGATAACATGCACGAGGACGGGGCCG
AGCCCGGAGCGTTCGGCTTCGACCCGCTTAAGCTTGACAACAAGGACGCC
GCAGTGCGCGAGAAGTACCAATTGCAGGAGATAAAGAATGGGCGCCTGGC
CATGTCGGCTATCGGTGGGCTTATCCACCAGTCTCTTCTTCTCCACGGCG
GCGTGCCGTTCCACGCGTAG
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