prot_H-paniculata_contig227.6042.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Match: D8LL00_ECTSI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL00_ECTSI) HSP 1 Score: 224 bits (571), Expect = 1.350e-71 Identity = 124/139 (89.21%), Postives = 129/139 (92.81%), Query Frame = 0
Query: 111 MGLPGPGVGYHPXXXXXXXXAFFPGSASLFEQLDKKVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGNIFGDIALGLYLVRGDALVLMGELDEALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDAS 249
MGLPG G HP XXXXXXAFFPGSASLFEQLDK+VMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFV +IFGDI+LGLYLVRGDALVLMGELDE EETPRL++VSADEIIEAQQEASAEERQDAKLDWLFQD S
Sbjct: 1 MGLPGMGF-QHPVPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEERQDAKLDWLFQDLS 138
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Match: A0A6H5JKJ0_9PHAE (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKJ0_9PHAE) HSP 1 Score: 225 bits (573), Expect = 2.230e-70 Identity = 124/140 (88.57%), Postives = 130/140 (92.86%), Query Frame = 0
Query: 110 RMGLPGPGVGYHPXXXXXXXXAFFPGSASLFEQLDKKVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGNIFGDIALGLYLVRGDALVLMGELDEALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQDAS 249
RMGLPG G HP XXXXXXAFFPGSASLFEQLDK+VMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFV +IFGDI+LGLYLVRGDALVLMGELDE EETPRL++VSADEIIEAQQEASAE+RQDAKLDWLFQD S
Sbjct: 107 RMGLPGMGF-QHPLPXXXXXXAFFPGSASLFEQLDKRVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELDETREETPRLRRVSADEIIEAQQEASAEDRQDAKLDWLFQDLS 245
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Match: A0A835ZG91_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG91_9STRA) HSP 1 Score: 146 bits (369), Expect = 8.750e-40 Identity = 86/158 (54.43%), Postives = 105/158 (66.46%), Query Frame = 0
Query: 104 GVVFPPRMGLPGPGVGY---------HPXXXXXXXXAFFPGSASLFEQLDKKVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGNIFGDIALGLYLVRGDALVLMGELDEALEETPR-----LKKVSADEIIEAQQEASAEERQDAKLDWLFQD 247
G PPR G GP + PX +FFPG+ASL EQLDK VMVVLRDGRHLVG+MRSYDQFSNIVLEDTHERHFVG ++GDI LGLY+VRGD++VL+GE+ LK+V+ADEI++AQQE+ + K++W F D
Sbjct: 80 GAPMPPRGGPMGPPPQFPXXGAMPLGRPXPPVIAPPSFFPGAASLHEQLDKVVMVVLRDGRHLVGLMRSYDQFSNIVLEDTHERHFVGALYGDIPLGLYIVRGDSVVLLGEVAAEXXXXXXXXXALLKRVTADEILQAQQESDVDP---FKVEWDFGD 234
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Match: K3WSU0_GLOUD (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU0_GLOUD) HSP 1 Score: 132 bits (333), Expect = 8.320e-36 Identity = 65/115 (56.52%), Postives = 87/115 (75.65%), Query Frame = 0
Query: 132 FFPGSASLFEQLDKKVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGNIFGDIALGLYLVRGDALVLMGELDEALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLF 245
+FPGS SL EQLDKK++VVLRDGRHLVG +RS+DQFSNI+LEDT+ERH +F DI LGL ++RGD +VL+GELDE E + P +K+ S +EI+EA++ +A+ + W F
Sbjct: 4 YFPGSISLIEQLDKKILVVLRDGRHLVGYIRSFDQFSNIILEDTYERHVADGMFCDIELGLNIIRGDNIVLLGELDEDKERDQPHMKRASIEEILEAEERLNAKGAASVREQWDF 118
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Match: A0A7S2XVC4_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVC4_9STRA) HSP 1 Score: 131 bits (330), Expect = 2.080e-35 Identity = 69/115 (60.00%), Postives = 91/115 (79.13%), Query Frame = 0
Query: 132 FFPGSASLFEQLDKKVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGNIFGDIALGLYLVRGDALVLMGELDEALEETPRL-KKVSADEIIEAQQEASAEERQDAKLDWLF 245
FF G SL EQLDKK++VVLRDGRHLVGV+RS+DQFSN+V+E+THERH V IFGDI LGLY+VRGD +VL+GE+DE E + + ++VSA+EI+ AQ+ + E++ K+ W F
Sbjct: 4 FFAGGMSLVEQLDKKILVVLRDGRHLVGVLRSFDQFSNMVMENTHERHVVEGIFGDIPLGLYIVRGDNVVLLGEVDEEKESSSQHPRRVSAEEILHAQR--NTEDK--TKVAWDF 114
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Match: H3GH42_PHYRM (U6 snRNA-associated Sm-like protein LSm1 n=43 Tax=Peronosporaceae TaxID=4777 RepID=H3GH42_PHYRM) HSP 1 Score: 126 bits (316), Expect = 2.880e-33 Identity = 59/115 (51.30%), Postives = 86/115 (74.78%), Query Frame = 0
Query: 133 FPGSASLFEQLDKKVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGNIFGDIALGLYLVRGDALVLMGELDEALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLFQ 246
FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQ+SNI+LEDT ERH G +F DI LGL ++RGD +VL+GELD E + P +K+V +E++EA+++ + + W F+
Sbjct: 5 FPGNSSLIQQLDKQVLMVLRDGRHLVGYLRSFDQYSNIILEDTFERHVAGGLFCDIELGLNIIRGDNIVLLGELDSEKERDQPHMKRVELEEVLEAEEQLNEAGNTSVRQQWDFE 119
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Match: W4GB80_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GB80_9STRA) HSP 1 Score: 126 bits (316), Expect = 3.240e-33 Identity = 65/114 (57.02%), Postives = 86/114 (75.44%), Query Frame = 0
Query: 133 FPGSASLFEQLDKKVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGNIFGDIALGLYLVRGDALVLMGELDEALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWLF 245
FPG +SL EQLDK+++VVLRDGRHLVG++RS+DQFSNIVLE T ERH VGN + DI LGLY++RG+ +VLMGELD+A E E L + SA+E++ A+ E + + + W F
Sbjct: 7 FPGVSSLVEQLDKQLLVVLRDGRHLVGIIRSFDQFSNIVLEGTCERHVVGNTYCDIPLGLYIIRGENIVLMGELDQAKEAEDVNLTRKSAEEVLTAEMEQNEQGLPTVRDAWNF 120
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Match: A0A6V1WH12_HETAK (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WH12_HETAK) HSP 1 Score: 125 bits (313), Expect = 7.410e-33 Identity = 63/112 (56.25%), Postives = 86/112 (76.79%), Query Frame = 0
Query: 134 PGSASLFEQLDKKVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGNIFGDIALGLYLVRGDALVLMGELDEALEETPRLKKVSADEIIEAQQEASAEERQDAKLDWLF 245
PG L EQLDK++++VL+DGRHL+G +RS+DQFSN+V+E+T ERH V +GDI LGLYLVRGDA+VL+GE+D+A E L++VSADEI+E ++E + A+ DW F
Sbjct: 7 PGIMGLVEQLDKRILIVLQDGRHLIGTLRSFDQFSNVVIENTFERHVVDGCYGDIPLGLYLVRGDAVVLLGEVDDAGHEGI-LRRVSADEILELEREKESR----ARDDWDF 113
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Match: A0A0P1A9M0_PLAHL (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A9M0_PLAHL) HSP 1 Score: 123 bits (309), Expect = 3.520e-32 Identity = 60/113 (53.10%), Postives = 85/113 (75.22%), Query Frame = 0
Query: 133 FPGSASLFEQLDKKVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGNIFGDIALGLYLVRGDALVLMGELDEALE-ETPRLKKVSADEIIEAQQEASAEERQDAKLDWL 244
FPG++SL +QLDK+V++VLRDGRHLVG +RS+DQFSNI+LEDT+ERH G +F DI LGL ++RG +VL+GELD E + P +K+V +E++EA++ + E L +L
Sbjct: 5 FPGNSSLIQQLDKQVLMVLRDGRHLVGNLRSFDQFSNIILEDTYERHVAGGLFCDIELGLNIIRGGNIVLLGELDSDKERDQPHMKRVKLEEVLEAEERLNEEGNTSLSLSFL 117
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Match: A0A6G0XJC2_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJC2_9STRA) HSP 1 Score: 123 bits (308), Expect = 4.690e-32 Identity = 62/114 (54.39%), Postives = 85/114 (74.56%), Query Frame = 0
Query: 133 FPGSASLFEQLDKKVMVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVGNIFGDIALGLYLVRGDALVLMGELDEALEETPR-LKKVSADEIIEAQQEASAEERQDAKLDWLF 245
FPG SL EQLDK+++VVLRDGRHLVG++RS+DQ+SNIVLE+T ERH VGN + DI LGLY++RG+ +VLMGELD+A E L + +A+E++ A+ E + + + W F
Sbjct: 4 FPGVTSLVEQLDKQMLVVLRDGRHLVGMIRSFDQYSNIVLEETCERHVVGNTYCDIPLGLYIIRGENIVLMGELDQAKEAADENLVRKTAEEVLTAEMEQQEQGQATVRDTWNF 117 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig227.6042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig227.6042.1 ID=prot_H-paniculata_contig227.6042.1|Name=mRNA_H-paniculata_contig227.6042.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=250bpback to top |