prot_H-paniculata_contig22698.6041.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22698.6041.1
Unique Nameprot_H-paniculata_contig22698.6041.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length207
Homology
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BLAST of mRNA_H-paniculata_contig22698.6041.1 vs. uniprot
Match: D8LD01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD01_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 9.890e-13
Identity = 58/129 (44.96%), Postives = 72/129 (55.81%), Query Frame = 0 
Query:   70 RVQLAGEALTTGIGIVIGGATVIAVGRGLTTLASAFNLADYRTTSGHDLRLNDRRLHTQCRRNIHPLTGRILPVPAASSMDDCSRGAILSSFVGEVTEEEEEVVDWREEVRRASRLPDVKSDPVAESGS 198
            ++ L  EAL  G   VI GA +I  GRGL+TLA AF LADYRTTSGHDLRL D +L ++ RR + P +       + S      RGA  ++   E         DWREE+R AS+LPD   D V   GS
Sbjct:   69 QLALESEALAVGAA-VIAGAAIIGAGRGLSTLAGAFKLADYRTTSGHDLRL-DEKLGSK-RRRLDPSS----ETTSGSLESTGGRGASETALGVET--------DWREEIRLASQLPD---DSVVFGGS 179
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22698.6041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD01_ECTSI9.890e-1344.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..25
score: 0.559
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22698contigH-paniculata_contig22698:1012..3310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22698.6041.1mRNA_H-paniculata_contig22698.6041.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22698 497..3337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22698.6041.1 ID=prot_H-paniculata_contig22698.6041.1|Name=mRNA_H-paniculata_contig22698.6041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
MSRYRPLRLFHVITVIFLSVRLSQAFYMSGKLTVRLSAACLRYTDSTFAR
ACVGQNRQASSRSNWSRRGRVQLAGEALTTGIGIVIGGATVIAVGRGLTT
LASAFNLADYRTTSGHDLRLNDRRLHTQCRRNIHPLTGRILPVPAASSMD
DCSRGAILSSFVGEVTEEEEEVVDWREEVRRASRLPDVKSDPVAESGSNK
DIIFRE*
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