mRNA_H-paniculata_contig22694.6039.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Match: D8LET0_ECTSI (Major facilitator superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET0_ECTSI) HSP 1 Score: 145 bits (366), Expect = 1.350e-39 Identity = 85/190 (44.74%), Postives = 116/190 (61.05%), Query Frame = 1
Query: 1 GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKRIGIVKMQMGASYAAIAVLLTVPNVKYLSWNDSSLLVISVVILTIMWSCLSMIMVGMMLASTSPVPPHLRGKLSGLFLMSQSLGRTIAPVAWATMYAWSVSTSPTGGATIALVDHRFVFNVSALLMTVIGVLSRRTLTAE 570
GFEEV+PLWALS+ VGGL W ++EIGK L TG M Q+F + ++K IG V I+ L PN K SWN ++L SV +T++ CL+ + + + +ASTS VP LRGKLSGL+ ++S GR + V +A ++AWS+S+ G VDHRFVF SAL + V V++ RTL AE
Sbjct: 61 GFEEVFPLWALSTVGVGGLGWGTMEIGKVLFMTGCIMVVAQLFIFPSVIKIIGAVAWMRTGCLLGISAFLATPNAKLFSWNYTTLFAASVASVTVVNCCLAAVSIALAVASTSIVPSSLRGKLSGLYGTAESFGRFTSAVGFAALFAWSISSDNLGW-----VDHRFVFYSSALALGVATVVAWRTLPAE 245
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Match: A0A6H5K449_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K449_9PHAE) HSP 1 Score: 138 bits (348), Expect = 6.090e-37 Identity = 86/190 (45.26%), Postives = 116/190 (61.05%), Query Frame = 1
Query: 1 GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKRIGIVKMQMGASYAAIAVLLTVPNVKYLSWNDSSLLVISVVILTIMWSCLSMIMVGMMLASTSPVPPHLRGKLSGLFLMSQSLGRTIAPVAWATMYAWSVSTSPTGGATIALVDHRFVFNVSALLMTVIGVLSRRTLTAE 570
GF+EVYPL+ALS+ VGGL WS+VEIGK L TG+ M Q+F + L+K +GI Q IA L +P V SWN +SL+ +S T+ + + + + ST+ VP ++RGKL GLF ++SLGR I P +A +YAWSVS S T A VD+RFVFNVSA + ++ L+ RTL E
Sbjct: 74 GFDEVYPLFALSTPDVGGLGWSTVEIGKVLVMTGVLMACCQLFLFPPLIKIVGITTWQRLGCRIGIATFLAIPAVNVFSWNFNSLVGVSRAADTLANCGCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPS-TLDAFGGWVDYRFVFNVSAAALALVAALAWRTLATE 262
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Match: D7G0L9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L9_ECTSI) HSP 1 Score: 139 bits (349), Expect = 1.180e-35 Identity = 85/190 (44.74%), Postives = 114/190 (60.00%), Query Frame = 1
Query: 1 GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKRIGIVKMQMGASYAAIAVLLTVPNVKYLSWNDSSLLVISVVILTIMWSCLSMIMVGMMLASTSPVPPHLRGKLSGLFLMSQSLGRTIAPVAWATMYAWSVSTSPTGGATIALVDHRFVFNVSALLMTVIGVLSRRTLTAE 570
GF+EVYPL+A S+ VGGL WS+VEIGK L TG+ M Q+ + L+K +GI Q IA L +P V SWN +SL+ +SV T+ + + + + ST+ VP ++RGKL GLF ++SLGR I P +A +YAWSVS S T A VDHRFVF SA + ++ L+ RTLT E
Sbjct: 243 GFDEVYPLFAFSTPDVGGLGWSTVEIGKVLVMTGVLMACCQLLLFPPLIKMVGITTWQRLGCRIGIAAFLAIPAVNVFSWNFNSLVGVSVAANTLANCSCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPS-TLDAFGGWVDHRFVFYASAAALALVAALAWRTLTTE 431
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Match: A0A6H5JRQ3_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ3_9PHAE) HSP 1 Score: 139 bits (350), Expect = 4.890e-35 Identity = 85/190 (44.74%), Postives = 116/190 (61.05%), Query Frame = 1
Query: 1 GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKRIGIVKMQMGASYAAIAVLLTVPNVKYLSWNDSSLLVISVVILTIMWSCLSMIMVGMMLASTSPVPPHLRGKLSGLFLMSQSLGRTIAPVAWATMYAWSVSTSPTGGATIALVDHRFVFNVSALLMTVIGVLSRRTLTAE 570
GF+EVYPL+ALS+ VGGL WS+VEIGK L TG+ M Q+ + L+K +GI Q IA L +P V SWN +SL+ +SV T+ + + + + ST+ VP ++RGKL GLF ++SLGR I P +A +YAWSVS S T A VD+RFVF+ SA + ++ L+ RTLT E
Sbjct: 409 GFDEVYPLFALSTPDVGGLGWSTVEIGKVLVMTGVLMACCQLLLFPPLIKMVGITTWQRLGCRIGIAAFLAIPAVNVFSWNFNSLVGVSVAANTLANCSCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPS-TLDAFGGWVDYRFVFDASAAALALVAALAWRTLTTE 597
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Match: A0A6H5JH24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH24_9PHAE) HSP 1 Score: 135 bits (341), Expect = 1.070e-34 Identity = 81/190 (42.63%), Postives = 114/190 (60.00%), Query Frame = 1
Query: 1 GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKRIGIVKMQMGASYAAIAVLLTVPNVKYLSWNDSSLLVISVVILTIMWSCLSMIMVGMMLASTSPVPPHLRGKLSGLFLMSQSLGRTIAPVAWATMYAWSVSTSPTGGATIALVDHRFVFNVSALLMTVIGVLSRRTLTAE 570
GF+EVYPL+ALS+ VGGL W++V+IG+ L G+ + Q + +K +GI Q +A L VP + + W+ SL +SVV ++ L I + + L ST+ VP +RGKL GL+ ++SLGR PV +AT YAWSVS S T A VD+ FVF +SAL + V+GV++ RTLT E
Sbjct: 185 GFDEVYPLYALSTPSVGGLGWNTVQIGQVLVMAGLMLAVCQFVLFPSFIKMVGITSFQRLGCGVGVATFLAVPGLTSIGWDYDSLFSLSVVANNLILCSLGSITLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPS-TLEAFGGWVDYHFVFYLSALALVVVGVMAWRTLTVE 373
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Match: D8LJK9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI) HSP 1 Score: 135 bits (341), Expect = 4.010e-34 Identity = 80/190 (42.11%), Postives = 111/190 (58.42%), Query Frame = 1
Query: 1 GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKRIGIVKMQMGASYAAIAVLLTVPNVKYLSWNDSSLLVISVVILTIMWSCLSMIMVGMMLASTSPVPPHLRGKLSGLFLMSQSLGRTIAPVAWATMYAWSVSTSPTGGATIALVDHRFVFNVSALLMTVIGVLSRRTLTAE 570
GFEEV+PLWALS+ VGGL+W ++EIGK L +G M Q+F + ++K +G V I L PN K SWN ++L V +T+ CL+ + + + +ASTS VP LRGKLSGL+ ++S GR + V ++AWS+S+ VDHRFVF SAL + V V++ RTL AE
Sbjct: 297 GFEEVFPLWALSTVGVGGLDWGTMEIGKVLFLSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNHTTLFAALVASVTVANCCLAAVGIALAVASTSIVPSRLRGKLSGLYGTAESFGRFASAVGSGVLFAWSISSDNPDW-----VDHRFVFYSSALSLGVATVVAWRTLPAE 481
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Match: A0A6H5JAX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAX4_9PHAE) HSP 1 Score: 135 bits (341), Expect = 5.710e-34 Identity = 82/190 (43.16%), Postives = 113/190 (59.47%), Query Frame = 1
Query: 1 GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKRIGIVKMQMGASYAAIAVLLTVPNVKYLSWNDSSLLVISVVILTIMWSCLSMIMVGMMLASTSPVPPHLRGKLSGLFLMSQSLGRTIAPVAWATMYAWSVSTSPTGGATIALVDHRFVFNVSALLMTVIGVLSRRTLTAE 570
GFEEV+PLWALS+ VGGL+W ++EIGK L +G M Q+F + ++K +G V I L PN K SWN ++L V SV +TI+ L+ + + + +AST V LRGKLSGL+ ++S GR + V A ++AWS+S+ G VDHRFVF SAL + V V++ RTL AE
Sbjct: 334 GFEEVFPLWALSTVGVGGLDWGTMEIGKVLFVSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNYTTLFVASVASVTIVNCSLAAVGIALAVASTDIVSSRLRGKLSGLYGTAESFGRFASAVGSAVLFAWSISSDNLGW-----VDHRFVFYSSALALGVATVVAWRTLPAE 518
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Match: D8LJX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX7_ECTSI) HSP 1 Score: 133 bits (335), Expect = 1.080e-33 Identity = 82/190 (43.16%), Postives = 113/190 (59.47%), Query Frame = 1
Query: 1 GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKRIGIVKMQMGASYAAIAVLLTVPNVKYLSWNDSSLLVISVVILTIMWSCLSMIMVGMMLASTSPVPPHLRGKLSGLFLMSQSLGRTIAPVAWATMYAWSVSTSPTGGATIALVDHRFVFNVSALLMTVIGVLSRRTLTAE 570
GFEE YPL+ALS+ VGGL W++ +IGK L TG+ M +Q+ L+K +GI Q + +P+V+ LSWN SL SV T L+ + + M + ST+ VP +RGKL GL+ M++SLGR + P +A YAWSVS S + A V+ RFVF VSA+L+ + VL+ TLTAE
Sbjct: 191 GFEEAYPLFALSTPDVGGLGWNTFQIGKVLVMTGLFMACFQLLLLPPLIKVVGITNWQRVGFVVGALAFIAIPSVRLLSWNYPSLFSASVAANTFASCGLAAVTLAMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAITYAWSVSPS-SSAAGFDWVNFRFVFWVSAVLLALCAVLAWPTLTAE 379
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Match: A0A6H5K5T8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T8_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.580e-33 Identity = 84/191 (43.98%), Postives = 121/191 (63.35%), Query Frame = 1
Query: 1 GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKRIGIVKMQ-MGASYAAIAVLLTVPNVKYLSWNDSSLLVISVVILTIMWSCLSMIMVGMMLASTSPVPPHLRGKLSGLFLMSQSLGRTIAPVAWATMYAWSVSTSPTGGATIALVDHRFVFNVSALLMTVIGVLSRRTLTAE 570
GF+E YPL+ALS+ VGGL W++++IGK L TG+ M +Q+ L+K +GI K Q +G A+A + +P+V+ LSWN SL SV + T L+ + + M + ST+ VP +RGKL GL+ M++SLGR + P +A YAWSVS S + A + V+ RFVF SA+L+ + VL+ TLTAE
Sbjct: 359 GFDEAYPLFALSTPDVGGLGWNTLQIGKVLVMTGLFMACFQLLLLPPLIKVVGITKWQRVGFCVGALA-FIAIPSVRSLSWNYPSLFSASVAVNTFASCGLAAVALTMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAISYAWSVSPS-SSAAGVDWVNFRFVFWASAVLLAMCAVLAWSTLTAE 547
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI) HSP 1 Score: 131 bits (329), Expect = 2.960e-32 Identity = 79/190 (41.58%), Postives = 113/190 (59.47%), Query Frame = 1
Query: 1 GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKRIGIVKMQMGASYAAIAVLLTVPNVKYLSWNDSSLLVISVVILTIMWSCLSMIMVGMMLASTSPVPPHLRGKLSGLFLMSQSLGRTIAPVAWATMYAWSVSTSPTGGATIALVDHRFVFNVSALLMTVIGVLSRRTLTAE 570
GF+EVYPL+ALS+ VGGL W++V+IG+ + G+ + Q+ + +K +GI Q +A L VP + + W+ SL +SVV ++ L I + + L ST+ VP +RGKL GL+ ++SLGR PV +AT YAWSVS S T A VD+ VF SAL + V+GV++ RTLT E
Sbjct: 355 GFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPS-TLEAFGGWVDYHLVFCASALALVVVGVMAWRTLTVE 543 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22694.6039.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22694.6039.1 >prot_H-paniculata_contig22694.6039.1 ID=prot_H-paniculata_contig22694.6039.1|Name=mRNA_H-paniculata_contig22694.6039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp GFEEVYPLWALSSYRVGGLEWSSVEIGKALAFTGMGMTFYQIFCYSWLVKback to top mRNA from alignment at H-paniculata_contig22694:2136..3824- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22694.6039.1 ID=mRNA_H-paniculata_contig22694.6039.1|Name=mRNA_H-paniculata_contig22694.6039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1689bp|location=Sequence derived from alignment at H-paniculata_contig22694:2136..3824- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22694:2136..3824- >mRNA_H-paniculata_contig22694.6039.1 ID=mRNA_H-paniculata_contig22694.6039.1|Name=mRNA_H-paniculata_contig22694.6039.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at H-paniculata_contig22694:2136..3824- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |