prot_H-paniculata_contig22692.6038.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22692.6038.1
Unique Nameprot_H-paniculata_contig22692.6038.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length290
Homology
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BLAST of mRNA_H-paniculata_contig22692.6038.1 vs. uniprot
Match: A0A6H5J820_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J820_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.940e-10
Identity = 42/86 (48.84%), Postives = 51/86 (59.30%), Query Frame = 0 
Query:  178 AVEEVGIRTSMSTGNRWVIGRRVKGDDGTGRGTGLVGSNINGNCRQHAGWATSAGKGQGGELFAMVEAPILSVGDARAAAERLFLG 263
            A  E+GIRTSMS GNRWVIGRR+ G+ G+G  + L                       G EL+A +EAP+LSVGDARAAA R+F G
Sbjct:  250 AAREIGIRTSMSKGNRWVIGRRLAGESGSGGRSRL-----------------------GHELYATIEAPVLSVGDARAAASRVFSG 312
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BLAST of mRNA_H-paniculata_contig22692.6038.1 vs. uniprot
Match: D7G5K6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K6_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 4.020e-10
Identity = 41/86 (47.67%), Postives = 50/86 (58.14%), Query Frame = 0 
Query:  178 AVEEVGIRTSMSTGNRWVIGRRVKGDDGTGRGTGLVGSNINGNCRQHAGWATSAGKGQGGELFAMVEAPILSVGDARAAAERLFLG 263
            A  E+GIRTSMS GNRWVIGRR+ G+ G G G   +G                       E++A +EAP+LSVGDARAAA R+F G
Sbjct: 1043 AAREIGIRTSMSKGNRWVIGRRLAGESGGGGGRSRLGH----------------------EVYATIEAPVLSVGDARAAASRVFSG 1106
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22692.6038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J820_9PHAE1.940e-1048.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5K6_ECTSI4.020e-1047.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22692contigH-paniculata_contig22692:2303..3172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22692.6038.1mRNA_H-paniculata_contig22692.6038.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22692 2303..3736 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22692.6038.1 ID=prot_H-paniculata_contig22692.6038.1|Name=mRNA_H-paniculata_contig22692.6038.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
EGCAACSGGGGEAELKRGGGWLLPVGGGNGQQQGEGFKALVEAFARRGRP
ELGVEELRWRSPEKGQQQLAALDDIHASLRDPQGSSLGSERKDLAASARR
ETSLRIGLREPPAEGEGADAEKNNNNPNGDSSNNGSSNLSGRAGSRPPSG
ETWSANEDDAEQRSVHGLLATKAHRPLAVEEVGIRTSMSTGNRWVIGRRV
KGDDGTGRGTGLVGSNINGNCRQHAGWATSAGKGQGGELFAMVEAPILSV
GDARAAAERLFLGRDGNSGANARDAAERSNDRTLASRLR*
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