mRNA_H-paniculata_contig2267.6031.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Match: A0A6H5KKT0_9PHAE (PPM-type phosphatase domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKT0_9PHAE) HSP 1 Score: 228 bits (582), Expect = 1.120e-70 Identity = 128/202 (63.37%), Postives = 145/202 (71.78%), Query Frame = 3
Query: 324 MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTGGSSPG------IAAFAVFDGHVVRSSKFAQYDTQERHQQIQKGGAEVAKYCSAHICDVVKSTAAFKSGDVERGLKQSFLHMDDMLRTPAGQAELLALKKQSQEGGSDSDDGEEAELVDMDVLSKMNPETHMQIVEQMKQALREQFRSRGTV 911
MGAYLSQP K+T+DG DD LRWGAAGMQGWRTGMEDSHLACLDL ++P IAAFAVFDGH GGAEVAKYCSAHICDVVK T AFK G+ GLKQ+FL MDDMLRTPAGQAELLALKK SQ SDSDDGE+ +VDM +LSK+ PET +QI+EQMK+A+R+QF+S G +
Sbjct: 1 MGAYLSQPNLAKDTQDG-DDGELRWGAAGMQGWRTGMEDSHLACLDLNGKDSATPAADPAKKIAAFAVFDGH---------------------GGAEVAKYCSAHICDVVKGTEAFKEGNFGLGLKQTFLKMDDMLRTPAGQAELLALKKASQGEDSDSDDGED--VVDMGMLSKIKPETQLQIMEQMKRAMRDQFQSAGDL 178
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Match: J9FFG5_9SPIT (Protein phosphatase 2C n=5 Tax=Eukaryota TaxID=2759 RepID=J9FFG5_9SPIT) HSP 1 Score: 117 bits (293), Expect = 1.120e-26 Identity = 63/151 (41.72%), Postives = 88/151 (58.28%), Query Frame = 3
Query: 324 MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTGGSSPGIAAFAVFDGHVVRSSKFAQYDTQERHQQIQKGGAEVAKYCSAHICDVVKSTAAFKSGDVERGLKQSFLHMDDMLRTPAGQAELLALKKQSQEGGS 776
MG YL+ P K+KE+EDGE+ T LR+GA GMQGWR MEDSH+ACLDL G++ F V+DGH GG EVA + H+ D +K +F+ + E+ LK ++H+D+ML TP G+++L + KK + G S
Sbjct: 1 MGPYLTVPRKEKESEDGEN-TKLRYGATGMQGWRNTMEDSHIACLDL------GHGVSFFGVYDGH---------------------GGNEVADFVRDHLVDELKKLPSFQGSNYEQALKDIYIHLDEMLLTPYGKSKLQSYKKNNDSGSS 123
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Match: E1ZQM7_CHLVA (PPM-type phosphatase domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQM7_CHLVA) HSP 1 Score: 113 bits (282), Expect = 4.470e-25 Identity = 66/151 (43.71%), Postives = 92/151 (60.93%), Query Frame = 3
Query: 324 MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTGGSSPGIAAFAVFDGHVVRSSKFAQYDTQERHQQIQKGGAEVAKYCSAHICDVVKSTAAFKSGDVERGLKQSFLHMDDMLRTPAGQAELLALK-KQSQEGG 773
MGAYLS P++DKETE+GE+D+ ++G A MQGWRT MED+H+A LDL P +S FAV DGH GGAEVA++ + H+ V S+ AF++ D ER L Q++L MD++L + EL +L+ K+S+E G
Sbjct: 1 MGAYLSSPVRDKETEEGENDS-FKYGIAAMQGWRTDMEDAHIAELDLDPATKTS----LFAVLDGH---------------------GGAEVARFVANHLSQEVISSEAFQANDTERALIQAYLRMDELLVKEEHREELKSLRTKESEEEG 125
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Match: A0A2P6V0S6_9CHLO (Phosphatase 2c n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0S6_9CHLO) HSP 1 Score: 115 bits (287), Expect = 8.230e-25 Identity = 68/153 (44.44%), Postives = 93/153 (60.78%), Query Frame = 3
Query: 324 MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTGGSSPGIAAFAVFDGHVVRSSKFAQYDTQERHQQIQKGGAEVAKYCSAHICDVVKSTAAFKSGDVERGLKQSFLHMDDMLRTPAGQAELLALK-KQSQEGGSD 779
MGAYLS PI+DKE+E+GE+D ++G + MQGWRT MED+H A LDL P GG+ A FAV DGH GGAEVA++ + H+ + ST ++ GDVER L Q++L MD++L + EL AL+ K+++E G D
Sbjct: 1 MGAYLSSPIRDKESEEGENDA-YKFGISAMQGWRTDMEDAHAAVLDL-PDGGAKA--ALFAVLDGH---------------------GGAEVARFVANHLAHELVSTEGYQKGDVERALVQAYLRMDELLVKEEHREELKALRGKETEEEGGD 128
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Match: A0A078AAZ6_STYLE (Protein phosphatase 2c n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AAZ6_STYLE) HSP 1 Score: 110 bits (274), Expect = 6.340e-24 Identity = 65/159 (40.88%), Postives = 93/159 (58.49%), Query Frame = 3
Query: 324 MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTGGSSPGIAAFAVFDGHVVRSSKFAQYDTQERHQQIQKGGAEVAKYCSAHICDVVKSTAAFKSGDVERGLKQSFLHMDDMLRTPAGQAELLALKKQSQEG----GSDSDD 788
MGAYL+ P ++K +EDGE+ LR+GA MQGWRT MEDSH+A LDL G++ F V+DGH F Y + G EVA + H+ + +K +FK GD E+ LK +L +D+M++TPAG+++L +K + + GS SDD
Sbjct: 1 MGAYLTVPKREKLSEDGENSK-LRYGATSMQGWRTTMEDSHIAILDL------GNGVSFFGVYDGHGGNIYFFTIYFS----------GNEVADFVRDHLVEELKKLTSFKQGDYEQCLKDIYLKIDEMIQTPAGKSKLYTYQKNADKTAGLFGSQSDD 142
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Match: A0A087SD03_AUXPR (Protein-serine/threonine phosphatase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SD03_AUXPR) HSP 1 Score: 105 bits (262), Expect = 1.540e-21 Identity = 65/162 (40.12%), Postives = 88/162 (54.32%), Query Frame = 3
Query: 324 MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTGGSSPGIAAFAVFDGHVVRSSKFAQYDTQERHQQIQKGGAEVAKYCSAHICDVVKSTAAFKSGDVERGLKQSFLHMDDMLRTPAGQAELLALKKQSQEGGSDSDDGEEAELV 809
MGAYLSQPI +KET +GE++ R+G A MQGWR MED+H L ++P+ S GI FAVFDGH GG EVAKY + H+ +V + ++ G L Q+FL +DD+L P + EL AL+ +E + GEE +V
Sbjct: 1 MGAYLSQPITEKETAEGENEL-FRYGVAAMQGWRMDMEDAHSTVLRVEPS--SDAGI--FAVFDGH---------------------GGKEVAKYAAVHVPQLVVESEGYRGGQTALALSQAFLAVDDLLVLPEHREELKALRGGDKEEKQKTRRGEEEPMV 136
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Match: A0A2P6TU56_CHLSO (Inosine triphosphate pyrophosphatase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TU56_CHLSO) HSP 1 Score: 106 bits (265), Expect = 1.790e-21 Identity = 64/151 (42.38%), Postives = 90/151 (59.60%), Query Frame = 3
Query: 324 MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTGGSSPGIAAFAVFDGHVVRSSKFAQYDTQERHQQIQKGGAEVAKYCSAHICDVVKSTAAFKSGDVERGLKQSFLHMDDMLRTPAGQAELLALK-KQSQEGG 773
MGAYLS PI+DKET +GE+D ++G + MQGWRT MED+H A LDL P G S A FAV DGH GGAEVA++ + H+ + ST +++ D+E L+Q++L MD++L + EL +L+ K+S+E G
Sbjct: 1 MGAYLSSPIRDKETGEGENDA-FKFGVSAMQGWRTDMEDAHAAILDL-PDG--STKAALFAVLDGH---------------------GGAEVARFVANHLAQELLSTEGYQANDMEVALRQAYLRMDELLVKEEHREELKSLRAKESEEEG 126
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Match: A0A2J8AE65_9CHLO (Protein-serine/threonine phosphatase n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AE65_9CHLO) HSP 1 Score: 103 bits (257), Expect = 2.470e-21 Identity = 64/152 (42.11%), Postives = 83/152 (54.61%), Query Frame = 3
Query: 324 MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTGGSSPGIAAFAVFDGHVVRSSKFAQYDTQERHQQIQKGGAEVAKYCSAHICDVVKSTAAFKSGDVERGLKQSFLHMDDMLRTP--AGQAELLALKKQSQEGG 773
MGAYLSQPI DKET +G D GLR+G MQGWR MED+HLA +++ + P +A F VFDGH GGAEVAK+C ++ ++ T F G VE L + F MD+MLR A + E L K+ ++E G
Sbjct: 1 MGAYLSQPITDKETFEG-DGNGLRFGGGAMQGWRRTMEDAHLAEVNIS----NDPNLAVFGVFDGH---------------------GGAEVAKFCQKYMTLELQRTEEFSKGSVEDSLIKVFHRMDEMLRDQRYAEELEKLKTKEAAEEDG 126
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Match: A0A3M7KRP0_AUXPR (Protein-serine/threonine phosphatase n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KRP0_AUXPR) HSP 1 Score: 105 bits (262), Expect = 3.380e-21 Identity = 65/162 (40.12%), Postives = 88/162 (54.32%), Query Frame = 3
Query: 324 MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTGGSSPGIAAFAVFDGHVVRSSKFAQYDTQERHQQIQKGGAEVAKYCSAHICDVVKSTAAFKSGDVERGLKQSFLHMDDMLRTPAGQAELLALKKQSQEGGSDSDDGEEAELV 809
MGAYLSQPI +KET +GE++ R+G A MQGWR MED+H L ++P+ S GI FAVFDGH GG EVAKY + H+ +V + ++ G L Q+FL +DD+L P + EL AL+ +E + GEE +V
Sbjct: 1 MGAYLSQPITEKETAEGENEL-FRYGVAAMQGWRMDMEDAHSTVLRVEPS--SDAGI--FAVFDGH---------------------GGKEVAKYAAVHVPQLVVESEGYRGGQTALALSQAFLAVDDLLVLPEHREELKALRGGDKEEKQKTRRGEEEPMV 136
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Match: I0YIS0_COCSC (Protein-serine/threonine phosphatase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YIS0_COCSC) HSP 1 Score: 103 bits (257), Expect = 3.950e-21 Identity = 62/172 (36.05%), Postives = 90/172 (52.33%), Query Frame = 3
Query: 324 MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTGGSSPGIAAFAVFDGHVVRSSKFAQYDTQERHQQIQKGGAEVAKYCSAHICDVVKSTAAFKSGDVERGLKQSFLHMDDMLRTPAGQAELLALKKQSQEGGSDSDDGEEAELVDMDVLSKMNP 839
MGAYLSQPI DKET G L +G + MQGWR MED+H+A +DL G++P A F VFDGH GG+EVAK+C ++ + + + G++ L + F MD ML+ A AEL AL++ + + DD + + +D+L ++ P
Sbjct: 1 MGAYLSQPITDKETFIGGKAGFLEYGGSSMQGWRRTMEDAHIATVDL----GNAPDAAIFGVFDGH---------------------GGSEVAKFCQKYLAEEITRLEKYHEGNLPDSLVEVFHKMDSMLKDSAYGAELEALRRSTHDAQPQPDDSQVSTSEALDMLRQVLP 147 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2267.6031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2267.6031.1 >prot_H-paniculata_contig2267.6031.1 ID=prot_H-paniculata_contig2267.6031.1|Name=mRNA_H-paniculata_contig2267.6031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp MGAYLSQPIKDKETEDGEDDTGLRWGAAGMQGWRTGMEDSHLACLDLQPTback to top mRNA from alignment at H-paniculata_contig2267:5896..15187- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2267.6031.1 ID=mRNA_H-paniculata_contig2267.6031.1|Name=mRNA_H-paniculata_contig2267.6031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9292bp|location=Sequence derived from alignment at H-paniculata_contig2267:5896..15187- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2267:5896..15187- >mRNA_H-paniculata_contig2267.6031.1 ID=mRNA_H-paniculata_contig2267.6031.1|Name=mRNA_H-paniculata_contig2267.6031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig2267:5896..15187- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |