mRNA_H-paniculata_contig2264.6027.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2264.6027.1
Unique NamemRNA_H-paniculata_contig2264.6027.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Match: D8LSK6_ECTSI (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK6_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 8.770e-106
Identity = 157/193 (81.35%), Postives = 172/193 (89.12%), Query Frame = 1 
Query:    1 MSRLGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNGPDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMDFATELPKSPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQYLMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAECSEVS 579
            MS+L EGEQLFASFRA+AE+GDI  AKSLL +LKILMT FDSL P+G  GP+A RERTL RDVMEVAVFLSAREGD  AFQRHMAQLKP  MDF ++LP SPNQSAV GLNLLFLLV+NRLAEFHSELELMGDAERA  CV+FPVRLEQ+LMVGSYDQVLAARD+VPHEYYKYFL+SLL TV+DGIAECSE +
Sbjct:    1 MSKLAEGEQLFASFRASAEKGDIQKAKSLLTQLKILMTTFDSLPPMGAEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPLCMDFVSQLPPSPNQSAVLGLNLLFLLVENRLAEFHSELELMGDAERASECVMFPVRLEQFLMVGSYDQVLAARDHVPHEYYKYFLESLLGTVRDGIAECSEAA 193
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BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Match: A0A836CF55_9STRA (SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF55_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.760e-70
Identity = 108/188 (57.45%), Postives = 144/188 (76.60%), Query Frame = 1 
Query:   10 LGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNGPDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMD--FATELPKSPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQYLMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAEC 567
            L +G  L  S + +AE GD+ AA + L +LK+++  F SL P G     A  ERTL R+V+EVAVF+SAR+GD+ A  RHMAQLKPYY+D   AT LP S N+  + GLNL+FLLV+N+LA+FHSELELM D +R++ CV+FP+RLEQYLMVGSY+QVLAA+D+VPH+YY Y L +L++TV++ IA+C
Sbjct:    8 LSQGSALLQSLKKSAEAGDMQAANATLSQLKLVLINFPSLPPGGEESATAKAERTLAREVLEVAVFMSARQGDKKALARHMAQLKPYYLDGQLATSLPDSSNRLPLLGLNLIFLLVENKLADFHSELELMSDEDRSNECVMFPIRLEQYLMVGSYNQVLAAKDHVPHQYYSYLLSNLVDTVREAIADC 195
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BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Match: UPI0011D18FF9 (26S proteasome non-ATPase regulatory subunit 8 homolog A isoform X5 n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D18FF9)

HSP 1 Score: 185 bits (469), Expect = 1.830e-55
Identity = 97/189 (51.32%), Postives = 123/189 (65.08%), Query Frame = 1 
Query:    7 RLGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNGPDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMDFATELPKSPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQYLMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAECSE 573
            +L E  Q F  F+A   R D +A  SLL +LK+L+TEF SL PL    P+A  E TL RD+ E AV LS +  D+ AF+R   QLKPYY D    +P SP +  + GLNLL LLVQNR+AEFH+ELEL+  A   + C+   V LEQ  M G+Y++VL+AR  VPHE Y YF+D L +TV+D IA CSE
Sbjct:    4 KLTEVSQQFGRFKAALVRNDFSACTSLLSQLKVLLTEFKSLPPLFEETPNAVHELTLARDIYEHAVILSVKMEDQDAFERDFFQLKPYYTDAGGRIPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSE 192
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BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Match: UPI0011D1F7A3 (26S proteasome non-ATPase regulatory subunit 8 homolog A isoform X2 n=3 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D1F7A3)

HSP 1 Score: 185 bits (469), Expect = 2.000e-55
Identity = 97/189 (51.32%), Postives = 123/189 (65.08%), Query Frame = 1 
Query:    7 RLGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNGPDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMDFATELPKSPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQYLMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAECSE 573
            +L E  Q F  F+A   R D +A  SLL +LK+L+TEF SL PL    P+A  E TL RD+ E AV LS +  D+ AF+R   QLKPYY D    +P SP +  + GLNLL LLVQNR+AEFH+ELEL+  A   + C+   V LEQ  M G+Y++VL+AR  VPHE Y YF+D L +TV+D IA CSE
Sbjct:    4 KLTEVSQQFGRFKAALVRNDFSACTSLLSQLKVLLTEFKSLPPLFEETPNAVHELTLARDIYEHAVILSVKMEDQDAFERDFFQLKPYYTDAGGRIPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSE 192
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BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Match: A9PI71_POPTR (PCI domain-containing protein n=6 Tax=Saliceae TaxID=238069 RepID=A9PI71_POPTR)

HSP 1 Score: 183 bits (465), Expect = 1.170e-54
Identity = 95/189 (50.26%), Postives = 128/189 (67.72%), Query Frame = 1 
Query:    7 RLGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNGPDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMDFATELPKSPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQYLMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAECSE 573
            +L E  QLF  F+A   R D   + +LL +LK+L+T F SL PL  N P+A +E T+ RDV E AV LS + GD+ AF+R   QLKPYY D ++ LP+SP +  + GLNLL LLVQNR+AEFH+ELEL+      + C+   V LEQ  M G+Y++VL+A+ NVP++ Y YF+D L +TV+D IA CSE
Sbjct:    4 KLTEVSQLFERFKAACTREDFNTSTNLLSQLKVLLTGFRSLPPLFENTPNAVQELTIARDVFEHAVLLSVKIGDQEAFERDFFQLKPYYTDASSCLPQSPQEYMILGLNLLRLLVQNRIAEFHTELELLSPTALENPCIKHAVELEQSFMEGAYNRVLSAKQNVPYKTYDYFMDLLAKTVRDEIAGCSE 192
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BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Match: A0A4D9D7E3_9STRA (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7E3_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.210e-54
Identity = 94/190 (49.47%), Postives = 127/190 (66.84%), Query Frame = 1 
Query:   10 LGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNGPDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMDFATELPKSPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQYLMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAECSEVS 579
            L +G++L    ++  E   +  A SLL  LK+L+T F+SL P+    P A+ E  L R V+E AVFL+ ++ D+ AFQR MAQLKPYY D    L  S  +  + GLNLLFLLV+NRLAEFHSELE + +AERA+  V FP+ +EQ LMVGSY +VL AR   PH  Y +F+  L++TV+D +A+CSE +
Sbjct:    3 LEQGKKLVIKLQSAVESDHLGEAASLLGDLKVLLTNFESLPPMNQPSPHASEECALGRQVLEQAVFLAVKQRDKIAFQRQMAQLKPYYQDKGRGLTDSALRMPILGLNLLFLLVENRLAEFHSELEHLSEAERANVYVSFPILVEQQLMVGSYHKVLEARTRTPHPGYAFFMSLLVDTVRDAVADCSEAA 192
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BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Match: A0A388LLZ4_CHABU (PCI domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LLZ4_CHABU)

HSP 1 Score: 183 bits (464), Expect = 1.570e-54
Identity = 96/190 (50.53%), Postives = 123/190 (64.74%), Query Frame = 1 
Query:    4 SRLGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNGPDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMDFATELPKSPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQYLMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAECSE 573
            ++L    +LF  F+A   R D A    LL +LK+ +TEF SL PL    P A RE  L R+V+E AV LS R+ DE AF+RH  QLK YY D    LP SP +  + GLNLL LLVQNR+AEFH+ELEL+    + + C+   + LEQ+LM G+Y++VL AR  VP E Y YF+D L+ETV+D IA CSE
Sbjct:    3 AKLAAAGKLFTDFKAAYVRNDNARCSQLLAQLKLRLTEFPSLPPLYQQTPTAQRELLLAREVLEHAVVLSVRQRDEVAFERHFLQLKTYYTDTRHLLPVSPQEYPILGLNLLRLLVQNRIAEFHTELELLAPEAQENVCIKHAIELEQWLMEGAYNRVLTARQRVPDETYVYFMDRLMETVRDEIAGCSE 192
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BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Match: A0A2P2PI69_RHIMU (Uncharacterized protein MANES_02G006900 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2PI69_RHIMU)

HSP 1 Score: 182 bits (462), Expect = 3.330e-54
Identity = 94/189 (49.74%), Postives = 126/189 (66.67%), Query Frame = 1 
Query:    7 RLGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNGPDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMDFATELPKSPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQYLMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAECSE 573
            +L E  QLF  F+A   R DI    +LL +LK+L+T F SL PL  + P+A  E T+ RD+ E AV LS + GD+ AF+R   QLKPYY D ++ LP SP +  + GLNLL LLVQNR+AEFH+ELEL+      + C+   V LEQ  M G+Y++VL+A+ NVP++ Y YF+D L +TV+D IA CSE
Sbjct:    4 KLREVSQLFERFKAACTRDDIDTCSNLLSQLKVLLTGFRSLPPLFEDTPNAVHELTVARDIYEHAVLLSVKIGDQDAFERDFFQLKPYYTDASSRLPASPQEYMILGLNLLRLLVQNRIAEFHTELELLSPTALENPCIKHAVELEQSFMEGAYNRVLSAKQNVPYKSYDYFIDLLAKTVRDEIAGCSE 192
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BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Match: A0A7S2V1Z7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z7_9STRA)

HSP 1 Score: 183 bits (464), Expect = 3.690e-54
Identity = 91/188 (48.40%), Postives = 127/188 (67.55%), Query Frame = 1 
Query:   10 LGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNGPDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMD-FATELPKSPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQYLMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAECS 570
            L EG ++ +  +   + G ++ A + L +LKILMT+   L P   +   + +ER   R V+E AV LS R+  ++ F RH+AQLKPYY      ELP SP +  V GL+LLFLL +NRLAEFHSELEL+ + ERAD  V FP+ L+Q+L VGSYDQVL A+ +VPH YY YF+DS+++ V++ +AEC+
Sbjct:   34 LDEGNKILSQMKIDIDGGSLSQASTKLTQLKILMTKLPGLPPCTTDSSTSKKEREFARGVLEQAVLLSTRDEGKSGFPRHLAQLKPYYFGALHRELPASPLRLPVLGLHLLFLLTENRLAEFHSELELLAEEERADPHVRFPIELDQFLAVGSYDQVLEAKASVPHPYYAYFMDSIVDAVREAVAECT 221
[Close]
BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Match: A0A059C2K3_EUCGR (PCI domain-containing protein n=6 Tax=rosids TaxID=71275 RepID=A0A059C2K3_EUCGR)

HSP 1 Score: 182 bits (461), Expect = 4.710e-54
Identity = 95/189 (50.26%), Postives = 123/189 (65.08%), Query Frame = 1 
Query:    7 RLGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNGPDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMDFATELPKSPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQYLMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAECSE 573
            +L E  Q F  F+A   R D +   +LL +LK+L+TEF+SL PL    P+A  E TL RD+ E AV LS +  D+ AF+R   QLKPYY D    +P SP +  + GLNLL LLVQNR+AEFH+ELEL+  A   + C+   V LEQ  M G+Y++VL+AR  VPHE Y YF+D L +TV+D IA CSE
Sbjct:    4 KLTEVSQQFGRFKAALVRNDFSTCTTLLSQLKVLLTEFNSLPPLFEETPNAVHELTLARDIYEHAVILSVKMEDQEAFERDFFQLKPYYTDAGGCIPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSE 192
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2264.6027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSK6_ECTSI8.770e-10681.35CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=... [more]
A0A836CF55_9STRA3.760e-7057.45SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-contai... [more]
UPI0011D18FF91.830e-5551.3226S proteasome non-ATPase regulatory subunit 8 hom... [more]
UPI0011D1F7A32.000e-5551.3226S proteasome non-ATPase regulatory subunit 8 hom... [more]
A9PI71_POPTR1.170e-5450.26PCI domain-containing protein n=6 Tax=Saliceae Tax... [more]
A0A4D9D7E3_9STRA1.210e-5449.47CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=... [more]
A0A388LLZ4_CHABU1.570e-5450.53PCI domain-containing protein n=1 Tax=Chara brauni... [more]
A0A2P2PI69_RHIMU3.330e-5449.74Uncharacterized protein MANES_02G006900 n=1 Tax=Rh... [more]
A0A7S2V1Z7_9STRA3.690e-5448.40Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A059C2K3_EUCGR4.710e-5450.26PCI domain-containing protein n=6 Tax=rosids TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2264contigH-paniculata_contig2264:14339..21867 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.3
Seed ortholog evalue3.9e-83
Seed eggNOG ortholog2880.D8LSK6
KEGG koko:K03031
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005838,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0008541,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016043,GO:0019538,GO:0019941,GO:0022607,GO:0022624,GO:0030163,GO:0032991,GO:0034622,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043248,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051603,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
EggNOG free text desc.proteasome assembly
EggNOG OGsKOG3151@1,KOG3151@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03051
Exons4
Model size579
Cds size579
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2264.6027.1prot_H-paniculata_contig2264.6027.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2264 14339..21867 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929629.1765578-CDS-H-paniculata_contig2264:14338..144191622929629.1765578-CDS-H-paniculata_contig2264:14338..14419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2264 14339..14419 +
1691480942.555447-CDS-H-paniculata_contig2264:14338..144191691480942.555447-CDS-H-paniculata_contig2264:14338..14419Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2264 14339..14419 +
1622929629.1956465-CDS-H-paniculata_contig2264:18562..187391622929629.1956465-CDS-H-paniculata_contig2264:18562..18739Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2264 18563..18739 +
1691480942.5699537-CDS-H-paniculata_contig2264:18562..187391691480942.5699537-CDS-H-paniculata_contig2264:18562..18739Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2264 18563..18739 +
1622929629.21314-CDS-H-paniculata_contig2264:19782..199981622929629.21314-CDS-H-paniculata_contig2264:19782..19998Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2264 19783..19998 +
1691480942.5815651-CDS-H-paniculata_contig2264:19782..199981691480942.5815651-CDS-H-paniculata_contig2264:19782..19998Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2264 19783..19998 +
1622929629.2298758-CDS-H-paniculata_contig2264:21762..218671622929629.2298758-CDS-H-paniculata_contig2264:21762..21867Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2264 21763..21867 +
1691480942.5963056-CDS-H-paniculata_contig2264:21762..218671691480942.5963056-CDS-H-paniculata_contig2264:21762..21867Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2264 21763..21867 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2264.6027.1

>prot_H-paniculata_contig2264.6027.1 ID=prot_H-paniculata_contig2264.6027.1|Name=mRNA_H-paniculata_contig2264.6027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MSRLGEGEQLFASFRATAERGDIAAAKSLLMKLKILMTEFDSLAPLGCNG
PDATRERTLVRDVMEVAVFLSAREGDEAAFQRHMAQLKPYYMDFATELPK
SPNQSAVRGLNLLFLLVQNRLAEFHSELELMGDAERADACVIFPVRLEQY
LMVGSYDQVLAARDNVPHEYYKYFLDSLLETVQDGIAECSEVS
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mRNA from alignment at H-paniculata_contig2264:14339..21867+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2264.6027.1 ID=mRNA_H-paniculata_contig2264.6027.1|Name=mRNA_H-paniculata_contig2264.6027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7529bp|location=Sequence derived from alignment at H-paniculata_contig2264:14339..21867+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGAGACTTGGAGAAGGCGAGCAGCTGTTTGCGTCTTTTAGGGCGAC
TGCGGAGAGGGGAGACATCGCCGCAGCCAAGGTGCGTAAAAGTCACCCTT
TTGTGCTGTACCTCTCTGTCGGTGTACGATGTACAGCACAGACCGTGTAA
GCTGTGGGTGGCTCATCTACCGCACACAGCAGGCGTTGAACGTATAACTG
AGAAGTTGGTCGGTATAGCTGAGAAGTCAGTACGTATCGTTCTGTGCTAT
TTCTCTTTGTTGCGTTAGGATGTACTCTGGTGGAATCTGTTGCCACAAGT
TCTTCCCTAGTACCTCGTAGTCCTGCCTCTTTTGCGCACTGGTTTACAGA
AAGACGGAGCTGATGTTCGTGCAACCGTGCTGAAAGCATGCATTACACAC
GTGAGCCTATATTTGCACAGGTGATCATCTAACCCTTGTCTAATCTCTAT
CTAAAAGACAGGAGGGAGCGACACTCGTAATATGATTGTGAATATAGAGA
GCCGCGGTTGTTTAGAATGATAGTCCAGTACAGAAAATACCTAAAGACAG
AGAATTAGCGCAGTGTTACCCCTAACGATTTGCTTCTGTTGTCAGATGAC
TTTTGTGTTCCGAAACAGTCCGCGGCGCATCTAAGGTAAGGGCCAAAAAA
ATAAAAAGGAGACTCTTTTCTCTTTCTCTGACCGAGAAAACTCTCCGTTT
CATCTTCAACGCCAAGTTTAGCCATTTAGCTAATACCCAGGGTGTACAGA
CAGATAAATGACCCGCGCTCGGGCTGGGCATGCTGTTGCTGGGACACAAC
AACTCTCTAAAAACTAAAAATTAATACGAAGCAGCCAATGAAATGCGGTC
AGCACTGTCGTGGGAGACTCCCATAGTCATGGAAGCGTCCCACAAGCCAG
AGTCCTGCTGACGAATCTCGAGGGCGTCGATACAGGCAGGGAGAGACCTG
CTCGGCAACCCTTTCTTCCACAGACGGTACAGATAAAGCCGTCGACGCGA
TGCACTAACGTGTACACGATGGTCGAGCAGTGAGCTAAAGTCGACACAGT
CATGGAAGCATCCCATGGTCATGTGAACACCTCACGACGAAGGCATTGCA
TTCCACACGGGACGCGAGCGCCGTGGGTATATGTAGTGCCGGTGGTACCG
GTGAGAAAAGCAGGGAAAGAGAAATGAACACGAGGGGAGAAAACAGATGG
TGTTCTTTTCTCTTTTCCCTGCTGAAAAAAACCTTTGGAACGACCCTAAA
TACACACAGCGTGGTAAGTGGCGCATTATATGACACGACTGTGTAGCGCG
TGTACATCCTGGCCAACGCCGACAACCGCATCAAACATGAACAGGTCATG
TCCGTGCGTGTCTCTTCTTCTTTCTTCTTGTAAGGGATGGTGGTGACGTC
GGCAGTGGTGGTAGCCACGGCGGTAACACGACAGCCCCTCGTTTGCTCGC
AAGGGTTATATCTAGATTGTTGCCCCTTTTCCCGACTTACCTAGCCTACC
AAATGCCATATGCCTGTGAACGGCAAACCATTCTTGGGTAGCCCCATCTT
GTCATCGGTGTTGTCAGCGTATCCTGTGCACATATTGCAGCTCCAATATA
TCTTCGAACAACGATATTTATCCAAAACAGTGCAGCCCATTTCCAGCTTA
CCTTCAATATGCACTGAGTCATCACCCTCCAAGGGTAAACTCTCGAAGTA
TTCAAGGTGAGGAGATAGAGAGCATCATCCAACCACTGCGGGTGCTCGCT
GCAGGTGGTACGGCAAATGCGGGGTTGCATAGCATGAAGCATCTAGACGT
GACAACTGCAGCTTCTCTATCTCTCTTTCCCTCTCTTTCGAAGCGCATGC
TTCTACAAGCTGGGCTGGCGAAGCACTAGGTATAGTGCTTCCTCGGCCAA
GCGCAGCTCAAATTTTCGAGTTTTGGGCCGAGATTTTGACACCGGATTTG
TTGCACATTGGCCTGCGTAACATCTTGCCCCGCCCCCCAGACGTTTTGCC
TTTTGTTCACCTCAACTTGATATAGTTGAAAAGATGGAGGCGGGGTATCA
ATCGGCCAAACATGGGGCAAAAAACAAAAACAAAACGTCTAGGGGGGCAA
AGTGTTACGTAGGTCAATGCGTTACAAATCCAGTGTCAAAATCTCAGCCC
GAAACTCGGAAGTTTGAGCTGCGCTGGGCTCATTTTCTTGTGTAGTGCTA
CGGGGGCATTTCGACGAGAACAACTGTGCGCGGGATTTCACGTCCTTTGG
TGCAACATTTCGACATGTGCACGAAGATCACCCCCGTGAAGCGTGAGATA
AAGCCCGACAAGAAGTGACCTAATTTCGATACACGAGAAAAACTGTTGAA
ACGGTAGTATATGCATGTATTGTACAAGTGGTGCCCGCTGAGTTTGTAGT
TATACGAACAGCAACAAATGGTTCAAGTTGAAAGTCGCATTCCCATAGTA
TATGTACGACATCGTACGTACGAGTGCTACTGTATGGTGCCCGTTGAGTT
AGTGTTTTTACGAACATCAAATACGCGTCTCCTTCGTCATATGCTTCCAT
TTACGATACAGGTACAGCAGCATCACACATCGCCCATCATGAAGTCTCGT
TGTACTTGCACTACGCACGTCTTGTCATGTCTGCTCCGGGTTCTAGTGCT
TGTCGATGAAACCAGGCTCCATGTCAACAATATTGTGGTGCGCCTTGGAG
ACTCTCCACATGCTCTCGATCGGTCAGAATGTTCGACTGCAGGAACTCCG
TACGAATGATATCACACCCTTCCCAGCGCCTCTTTTCGAACCCGCTCTCT
GCGGAACTGAGATGACCAAGAGAGTTCCAAGATTTATCTATAGCGAGTTG
AAGCGGCAGCGAAGGGGAAGAGGTCGGTCGTCAAGATAGCAATGTGCACA
ACAGTGTTTATAGCACCGTCACTTGGCTCAACTCGCCTGGTGGAAGGTGA
GAAAACGCTGCTGCCGCCGACCCAGAGCCTGAAGTTGGGTCCTGAGCTGG
GAGATTAGTCGCCTCAATGGGCTTCCCGCGGTTCCCTCGTTCCCAATTCA
GCCGCCACGAGTCCCGAGCTTCTTCAGCCTCCGCTTGGGTGTTGAAAGGT
TTTGAGCTGCATCTGACCGGACGCGACTTTGATATTGTGTAGAAGAGTGC
CAACCGCTACATGCCCTTCTCCTTGTCGTATGAGATAGTAGGGAGTGACG
TCCTCTCCCAGCGCTGATCTCTCTGCGAGCTCGACGCCATCGTACAACAC
AAGCCCGGCGTTCTCGGGCGGGACAAGGAGAGTGCTGCAGCGCTGCAGCA
AGCAGCAAGTCTTAGAACAGGAAAAAAAGGATTCCGCCGCATTTTTGGCG
GTTTCGCCTCACTCTTAAACCAGCGTATTACTGACACGTGGACCTTGTTT
TGTCTAACTGCAACCAATCACATTGCAAGCCGTCCCTGCATGCGCATGCT
GATCGTCTGATGACATAAATATGTCAAATTCGCGATATCTCGCGGTGGTT
CTTGAGATATGTCCCGTGAAAAGAATTTCGATTTTGTGGTCAGCCCAGCT
TGTAGCTGACCTACGACTAGGATGGTATAGTCAACCTGGTCGCACCTTCC
CAACTCGACACCGGAATTTATGGTGTCCTGAATCAGGTCTTGCAGCATAT
GTCTTTATCTAGTCAAAATTGGGTGTTGGTAAGGATGACTACTAGCTGCA
TGATCTCGGTGCAACAACTACGGGCTGGGTGCAATTAAGCAGTCCCCCGG
CCAGTCGCACACCAATTGGGAGTTTTAAGGTGAATTTTTGCACGTGATGA
GCCCATGAGTACTACCGTCATAAAATGAAATGGTAAAAGTACCCGGATGG
CCGATCAGATTGTGCAGCGCTCTTCGGGGTACTTGCACGGTTCCAGGAGA
CTTAAAAATTGCATTGCGGAAAGCGCGTTCGTGTTATTTGGTCCGTGGAC
TGTTTCCGGTCTGTCTTCCCGGGCGTAGCTCGTATATGCGTAAGGGTACT
ACATGTACATCCCCATCTATCCCCCCCCCCTTCGCTCTATCCGACAGATT
TACGTACTGCGCCCATATGGAGACCCCTTCAACGTATCAGTTGTCAAACC
ATATTTTCGCCCGTTCCGCTCCTCCTTGTGAAAACTGATACCCCGAATCC
ATCACTGTTCTACCCTCCCTTTCCCACCTCCCTACAACAACGAAACGTGT
GCCTCAAATATGTGATCGAACCAGTCGCTGTTGATGAAGCTCAAGATCCT
GATGACTGAGTTCGACTCGCTAGCACCCCTTGGTTGCAACGGTCCTGACG
CGACGCGAGAACGCACGCTAGTCCGGGACGTGATGGAAGTGGCAGTGTTT
TTGAGCGCGAGGGAGGGAGACGAGGCCGCGTTCCAACGACACATGGCTCA
GGTGCGCGCGGTGGTGGAGATGTCGGGGGGCAGAGGATGTCCGATGAGGT
GCAGTGGAGGATATTGAAGAGTTGGCTCGTCCCACAGATTTTTTTTCACG
ACATAGATGTCTCTCAACGGTTGAAGCGGTGTTTATGTCTTGTTGGTTAG
GTCCATCTGTAGGTATGTGATTTAGCACCGTTGAAAGTACTGAACATACG
TCCTTTTTGTTTTTGATGATTCGTTTTATCTTTTCTGTCGAAAGTAACCA
GGGATGGCCATTTCGTGATTCGGAAGTATTACTTAAAGGCATAATGTTGC
CGCAAAAAGGATTTATTATACTAACGGTGAAGGTCAGGCATGTGCCGAGG
GGGGAGTATCATCCCCGGGAAGCCTTCCAGGCGATATGTAGCTCCCTTTC
GTTGGTCCTTTCCGGACTTCAGGTTGCTTTTTCTTCATCAGGTTAGATGT
GATATATTAGATTGATAACACAATCTACACCTTGACATCCAGACTGCGCC
CTGGCGGGGCCAACGCCGAGCAAATCGTAACCTAGTAATTTTTATGCGTG
TAGACCAACTTCTCCCATTGCTAGCTAATTTTGCTTCGTGCAGGCTTCAG
TTGTCAGCTACGTGTACATCCTTGTCCGATTCAGATTCTCAGTTGGTACG
GTCGTCACCCTCCAACTTGTCGTCTTCCTCCTGCTACAAACTATGAGTTG
AAGTCGTTACGGTTCCGTGACATTACCAACGGTAAATTACGCTAACCCCG
TGATGACCGTTCCTGTGGTCTACAGTCAATATTCCAAATCATGATCCCGT
GGTATAGATGCTGTCCTGCTGGTGAAACTGTCCTTGGCAGGTGGCAGGTG
GGGCGTTGCCGTTATGCTGCAGTTAGTGGGTGGAGTTCTTGCTCCTGCGT
AAAGGGTGTTGCTTGTTCTCTCGTGACTGTTGCTTGTTACCTTCAGGTTT
CCCCATCCCCTCCTGCCCCTCCGCGAAATACATTATTTTATTATGTCACC
TCTCAAACGTGCACTTCTACCTCTTTCCTGCACACGTGCCACAGCTGAAA
CCCTATTACATGGACTTCGCGACGGAGCTTCCAAAATCCCCAAACCAGAG
CGCGGTGAGGGGCTTGAACCTGCTGTTCTTGCTCGTGCAAAACCGACTGG
CGGAGTTCCACTCAGAGCTGGAATTGATGGGGGACGCGGAGAGGGCGGAC
GCTTGTGTGATTTTCCCGGTGCGACTGGAGCAGTACCTCATGGTCGGCAG
TTATGATCAGGTACCGTGCCCTTTGGTTGGGTATACTATTTCATTGCTAA
GACGCCGCTAATTTTTGGGATAGTCACTGAAGGAATAATCTTGTGTGGTA
GTCGAAGTAAATGCAGTGGATGACCCCATATATGGTATACTCGGTGCAGG
TGTAAAAATTGATCTTGTTCGTCGTTTGTACCTTACTCAGACGGTGTCTT
ATTTAAGGCCAAGTCGGTGCCGGGCGTGTCCATGAGTGTGCAACCTGACG
CGACGTGTGGTGCACCTTGGGGATGAGGCATATGTTTACTCCATTGCATT
ATTGTGACAATTTCATTCTTGTTTGGTGCGTTTCGCGTACGCTGTATATT
TCCAATCTCCACAGAAGCTGGAGATAATAACACAAATGCCGCATGGTCAC
CAATCGATTGCGGAACAAAAGGCACGTTGCGAGCGCAACGGTACAAAATA
GAGAAGCCCAACCGCGACAGTGTTGTATGCCTTCTACCATATGTATATAT
CTACATTGCCCTCAAACATCGTTGCAATGTAGTGAGGGCAAATGTGATGC
ATATCCACATCGCTCGAAGGGTCCTTCTCGCCACAAGCACGGTATAGATG
TATGCCATAGGCCCCGCGGCATTTGTCATCGGGAGGGACGCGCTTGTGCA
ATAAATAAGCACGAAATGGTAACCATTAACCAACGCTGAAGCGCTCGAGC
GATATGTACCTTATATAGGACGGCTCCTGTATGCTGGTGTCACCCACAAA
AGGTATACCTTAATCACCGGAGTGCCTTATCTGGGTGTACCTTATATAGG
GCCGCCTACTCTCCCTAACAATTGCTATTCTTTATGCGATTATAATATTA
TCTGAAAAGGTCAGAATTTACAAACCAGAATTGTTCGTGCTTTTAGTTTT
GTCCAACTCTACCGAGTTTCACTAGCACACCGTCATATATGTGTCGTGTT
TTGTTTCGGGGTGCTTTGGTCGTGTACAGTGACCATGTTATTGTTGTTTT
TTTGTAAAAATGTATTTTATAACATGGATTCTTCTTCACACCAACGAAAG
GGATCTGACAAAGTTAATGAGCGAACATGATGAAAAAATAGAAGAAAACA
GCATCTCGAGTATTGACGTGACCAACGGGTCTGTTTTCTAAGAGGCTTCG
GCGCTTGGTTGAACCCAACGATAGAGTTACCGTGTGATGAGCTGCAGGAA
AACGTAGAACTTTCGGCGCGTTTCATACATGCCGCCGCCTCTGCGCGACG
ACCCTCTCTGAGGGTCATATACCCCATTTTTGTTTTCCATCTCTTGTCGT
GTGACTTTTCCTTGTTATGTAGACCGCCACTGACTGAGCCTCGGTGTCCT
CATGTCAATCCCATTTCAAGGCCTGCAGAAAATCGCCGCTGTATTTTCCC
CCTGATGAGATGCCCCCTCGATTTGGTTACAAAAAATGGCAAGTATTTCC
ATTTATGGACATCTGGGACAAAGTCAGGCGCACGTATGTACTGCTTGCTA
TGGAAAACTTGCTGCTGATAGTTAGTTGCGGCTGTCGGCAGGGTCCTACT
TTGGTGTGGAAATCTTCCAGACTGTGTTCCTGTCTTGGTGTTTACAAGTT
TGCTGCTCTAAGGTACAAACATATCCACATCGCAAATCCTCAATAACTCA
GTAGACAACTCGGGTCTTCTAGGTTAAACTCTCCCCCCCCTCCCGCTCTT
TCGCTCCCGCCACCCGGTTTTGCCGCGCTTTCGCCGCACCTTTGGTGGCT
TTCATTCATGGATGCACAACTCAGGTGTTGGCGGCCCGAGACAACGTGCC
GCATGAGTACTACAAGTACTTCCTAGATTCTCTGCTGGAGACGGTGCAGG
ATGGGATTGCAGAGTGCAGCGAGGTTAGT
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Coding sequence (CDS) from alignment at H-paniculata_contig2264:14339..21867+

>mRNA_H-paniculata_contig2264.6027.1 ID=mRNA_H-paniculata_contig2264.6027.1|Name=mRNA_H-paniculata_contig2264.6027.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1158bp|location=Sequence derived from alignment at H-paniculata_contig2264:14339..21867+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGAGACTTGGAGAAGGCGAGCAGCTGTTTGCGTCTTTTAGGGCGAC
TGCGGAGAGGGGAGACATCGCCGCAGCCAAGATGTCGAGACTTGGAGAAG
GCGAGCAGCTGTTTGCGTCTTTTAGGGCGACTGCGGAGAGGGGAGACATC
GCCGCAGCCAAGTCGCTGTTGATGAAGCTCAAGATCCTGATGACTGAGTT
CGACTCGCTAGCACCCCTTGGTTGCAACGGTCCTGACGCGACGCGAGAAC
GCACGCTAGTCCGGGACGTGATGGAAGTGGCAGTGTTTTTGAGCGCGAGG
GAGGGAGACGAGGCCGCGTTCCAACGACACATGGCTCAGTCGCTGTTGAT
GAAGCTCAAGATCCTGATGACTGAGTTCGACTCGCTAGCACCCCTTGGTT
GCAACGGTCCTGACGCGACGCGAGAACGCACGCTAGTCCGGGACGTGATG
GAAGTGGCAGTGTTTTTGAGCGCGAGGGAGGGAGACGAGGCCGCGTTCCA
ACGACACATGGCTCAGCTGAAACCCTATTACATGGACTTCGCGACGGAGC
TTCCAAAATCCCCAAACCAGAGCGCGGTGAGGGGCTTGAACCTGCTGTTC
TTGCTCGTGCAAAACCGACTGGCGGAGTTCCACTCAGAGCTGGAATTGAT
GGGGGACGCGGAGAGGGCGGACGCTTGTGTGATTTTCCCGGTGCGACTGG
AGCAGTACCTCATGGTCGGCAGTTATGATCAGCTGAAACCCTATTACATG
GACTTCGCGACGGAGCTTCCAAAATCCCCAAACCAGAGCGCGGTGAGGGG
CTTGAACCTGCTGTTCTTGCTCGTGCAAAACCGACTGGCGGAGTTCCACT
CAGAGCTGGAATTGATGGGGGACGCGGAGAGGGCGGACGCTTGTGTGATT
TTCCCGGTGCGACTGGAGCAGTACCTCATGGTCGGCAGTTATGATCAGGT
GTTGGCGGCCCGAGACAACGTGCCGCATGAGTACTACAAGTACTTCCTAG
ATTCTCTGCTGGAGACGGTGCAGGATGGGATTGCAGAGTGCAGCGAGGTT
AGTGTGTTGGCGGCCCGAGACAACGTGCCGCATGAGTACTACAAGTACTT
CCTAGATTCTCTGCTGGAGACGGTGCAGGATGGGATTGCAGAGTGCAGCG
AGGTTAGT
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