prot_H-paniculata_contig22631.6025.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22631.6025.1
Unique Nameprot_H-paniculata_contig22631.6025.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length52
Homology
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Match: A0A6H5JQU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU4_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 4.990e-10
Identity = 25/52 (48.08%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGCLL 52
            +SQ A+ DS ++RF+V + S +P +P VDL P+ DDE RG+WP R A+G ++
Sbjct:  658 ISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKRGEWPVREAIGSMM 709          
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Match: A0A6H5KBH1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH1_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 6.750e-10
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGCLL 52
            +SQ A+ DS +ERF+V + S +P TP  DL P+ +DE+ G+WP R A+G ++
Sbjct:   64 ISQTAYIDSMVERFDVQSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMM 115          
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 7.350e-10
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGCLL 52
            +SQ A+ DS +ERF+V + S +P TP  DL P+ +DE+ G+WP R A+G ++
Sbjct:  128 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMM 179          
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Match: A0A6H5KPT0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT0_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.130e-9
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGCLL 52
            +SQ A+ DS +ERF+V + S +P TP  DL P+ +DE+ G+WP R A+G ++
Sbjct:   64 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMM 115          
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Match: A0A6H5K4T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T5_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.720e-9
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGCLL 52
            +SQ A+ DS +ERF+V + S +P TP  DL P+ +DE+ G+WP R A+G ++
Sbjct:  161 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMM 212          
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.730e-9
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGCLL 52
            +SQ A+ DS +ERF+V + S +P TP  DL P+ +DE+ G+WP R A+G ++
Sbjct:  271 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMM 322          
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Match: A0A6H5K1T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1T2_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.740e-9
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGCLL 52
            +SQ A+ DS +ERF+V + S +P TP  DL P+ +DE+ G+WP R A+G ++
Sbjct:  524 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMM 575          
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.740e-9
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGCLL 52
            +SQ A+ DS +ERF+V + S +P TP  DL P+ +DE+ G+WP R A+G ++
Sbjct:  619 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMM 670          
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.750e-9
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGCLL 52
            +SQ A+ DS +ERF+V + S +P TP  DL P+ +DE+ G+WP R A+G ++
Sbjct:  984 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMM 1035          
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.750e-9
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGCLL 52
            +SQ A+ DS +ERF+V + S +P TP  DL P+ +DE+ G+WP R A+G ++
Sbjct: 1093 ISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVRKAIGSMM 1144          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22631.6025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQU4_9PHAE4.990e-1048.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBH1_9PHAE6.750e-1046.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRS6_9PHAE7.350e-1046.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPT0_9PHAE1.130e-946.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4T5_9PHAE1.720e-946.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTL3_9PHAE1.730e-946.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1T2_9PHAE1.740e-946.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K164_9PHAE1.740e-946.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE1.750e-946.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQW4_9PHAE1.750e-946.15Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22631contigH-paniculata_contig22631:3892..4047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22631.6025.1mRNA_H-paniculata_contig22631.6025.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22631 3824..4047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22631.6025.1 ID=prot_H-paniculata_contig22631.6025.1|Name=mRNA_H-paniculata_contig22631.6025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=52bp
MSQMAFADSEMERFEVTTMSELPLTPLVDLDPRHDDEDRGDWPFRAAMGC
LL
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