mRNA_H-paniculata_contig2263.6024.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Match: D8LHU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU6_ECTSI) HSP 1 Score: 970 bits (2507), Expect = 0.000e+0 Identity = 487/666 (73.12%), Postives = 572/666 (85.89%), Query Frame = 1
Query: 4 QAPALLNVRDLYPPELSRIWKFKTFNSIQSALHPTVARTDRSVVISAPTGCGKTVALEMAVVRLLQESGMSFGNKKIIYISPIKALCQQTLEDWNLKFSPLGVRLSELTSDSTSY----SGSLRDLASADIIVTTPEKWDSVTRRWKDHAFLVGTVALVLVDEVHTIGEERGATLEVILTRMKSVARSPEVVSMGLPASRMRFLALSATLPNAADIGAFIRAEVFEFGPEYRPVPLQTHVVGYYAGDNPFLFDRGLNKHVAGMVSRYSGGKPTLIFCGSKKDTETVAAELAK-KDYAASGRSQVIMQYLWKAGEDAEDSQLGRLIRKGVAVHNSGLSPRDRGLVEKAFLTGSLSVLVSTTTLAMGVNLPARLVIIKGTNHYRGAKGYQELPRSAILQMMGRAGRPGFDSSGVAVVMTSQANKRALERMSSGQEAVESSLRARLLEALNSELHEAGVIAMDDDEFSASSTPHGVLFSRFMVRFESMKAIMALKENHGTMNILQLCASCEELSVPVRRNEKRVLNELNKQVRFPPAKKAIIRTPADKALALIQAALGGLAIEDWTMRGEQGSMLEIAARILGCCAESLAVPGRGGGLGCAVCLRLARSVRLKMWMDTELGQLRQLPGVGDQICLRLGTSQIVTLLDVAKTSPAKIDTIANRKHPHGHG 1986
Q P+L+ V+D+YPPELSRIW F+ FN+IQSAL T A++D++VV+SAPTGCGKTV LEMA+ RL QESG + GN+K+IYISPIKALCQQTL+DW KFSPLG+RL+ELTSDSTS S SLRDLASAD+I+TTPEKWDS+TRRWK+HAFLVGTVALVLVDEVHTIGEERGATLEVIL RMK V+RS EVVSMGLPASRMRF+ALSATLPNA D G+F+ AEVF FG E+RPVPLQTHV GY +G PFLFDRGLN VAG V+RYS GKP+L+FCGSKKDTETVA+ LAK DYA SQV+MQYL A AED QL +L+ +GVA+HNSGLSPRDRGLVE+AFL+GS++VLV+TTTLAMGVNLPARLV+IKGTN YRGA+GY+E+PRSAILQM+GRAGR GFDSSGVAVVMTS+ NK+ALER+S+GQEAVESSL+A+LLEA NSEL AGVIAMDDDEFS TPHGVLFSRFMVRFESMK I+ + ENHGT +IL++CA C E++VP+RR EKR LN+LN++VR+PP KK ++RTPADKAL L+QAALGGL ++DWT+RGEQ +ML+ +AR+LGCCAESLAV GRGGGLGCAV LRL RSVRL++WMD E GQL+QLPGVGD + RL S I+TL D+ ++ K+D I RKHP G+G
Sbjct: 251 QMPSLVGVKDVYPPELSRIWPFQNFNAIQSALFQTAAKSDKNVVVSAPTGCGKTVVLEMAIARLWQESGGTLGNRKVIYISPIKALCQQTLDDWTAKFSPLGIRLAELTSDSTSGPSKGSVSLRDLASADVILTTPEKWDSITRRWKEHAFLVGTVALVLVDEVHTIGEERGATLEVILARMKMVSRSTEVVSMGLPASRMRFIALSATLPNANDFGSFLGAEVFRFGDEFRPVPLQTHVAGYPSGSKPFLFDRGLNNRVAGTVARYSNGKPSLVFCGSKKDTETVASSLAKGTDYARRTGSQVVMQYLATAANTAEDPQLAKLMMRGVAIHNSGLSPRDRGLVERAFLSGSIAVLVATTTLAMGVNLPARLVVIKGTNQYRGAQGYKEMPRSAILQMIGRAGRQGFDSSGVAVVMTSERNKKALERLSAGQEAVESSLQAKLLEAFNSELRNAGVIAMDDDEFSVQPTPHGVLFSRFMVRFESMKVILEVSENHGTRDILRVCAECNEVNVPLRRAEKRFLNDLNQKVRYPPPKKEVVRTPADKALVLLQAALGGLHLDDWTLRGEQTAMLDTSARLLGCCAESLAVAGRGGGLGCAVSLRLMRSVRLRLWMDAERGQLKQLPGVGDTMSGRLEASGIITLTDLGCSTSVKVDAITGRKHPFGNG 916
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Match: A0A836C995_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C995_9STRA) HSP 1 Score: 468 bits (1203), Expect = 5.060e-154 Identity = 269/580 (46.38%), Postives = 360/580 (62.07%), Query Frame = 1
Query: 16 LLNVRDLYPPELSRIWKFKTFNSIQSALHPTVARTDRSVVISAPTGCGKTVALEMAVVRLLQESGMS-------------FGNKKIIYISPIKALCQQTLEDWNLKFSPLGVRLSELTSDSTSYSGS--LRDLASADIIVTTPEKWDSVTRRWKDHAFLVGTVALVLVDEVHTIGEE-RGATLEVILTRMKSVARSPEVVSMGLPASRMRFLALSATLPNAADIGAFIRA-EVFEFGPEYRPVPLQTHVVGYYAGD----NPFLFDRGLNKHVAGMVSRYSGGKPTLIFCGSKKDTETVAAELAK-KDYAAS-GRSQVIMQYLWKAGEDAEDSQLGRLIRKGVAVHNSGLSPRDRGLVEKAFLTGSLSVLVSTTTLAMGVNLPARLVIIKGTNHYRGAK-GYQELPRSAILQMMGRAGRPGFDSSGVAVVMTSQANKRALERMSSGQEAVESSLRARLLEALNSELHE----------------------------------------------------------AGVIAMDDDEFSASSTPHGVLFSRFMVRFESMKAIMALKENHGTMNILQLCASC 1509
L++V D +PP ++R+W+F+ FN++QSA+ A +D ++VISAPTGCGKTV EMA+ RLLQ GN+++IYI+P+KALCQQTL+ W KF+PLG+RL+E+T DS G+ LRD+A+ADII+TTPEKWDS TR + AFL+G+V L+LVDEVH + E+ RGATLE+I+TRMK++ P + LPA+RMR +ALSATLPN ADI AF A F F YRPVPL HV G+ G N FLFDR L +HVAG+V R+SGG P L+FCGS++D E VA +A+ +D++A GRS L +A +D +L L+ +GV H++ + +RG++E+AFL G+L VL STTTLA+GVNLPARLV+IKGT+ YRGA GY+ELP S +LQM+GRAGRPG+D+ GVAV+MTS+ K L + GQ+AVES L RL+EALN E+H+ A V+ +D+D +T G +FSR+MV F +M+ I A + L CA C
Sbjct: 55 LVSVADAFPPAIARLWQFEHFNAMQSAVLAAAAGSDENLVISAPTGCGKTVVFEMAIARLLQXXXXXXXXXXXXXXXXHRLGNQRVIYIAPLKALCQQTLDQWTAKFAPLGLRLAEVTGDSAGPIGAAALRDIAAADIILTTPEKWDSATRMSHERAFLIGSVRLLLVDEVHMLSEDGRGATLEMIITRMKALRSLPHIRGANLPAARMRMVALSATLPNVADIAAFFEAPRPFAFPDAYRPVPLTVHVDGFAGGGAQGGNAFLFDRALTRHVAGVVRRFSGGMPALVFCGSRRDAEGVAKAVAEARDWSADMGRSG--KGALAQAAAATQDKRLAALLGRGVGFHHAAMEQAERGIIERAFLAGALPVLASTTTLALGVNLPARLVVIKGTSVYRGASSGYEELPPSMLLQMVGRAGRPGYDTEGVAVIMTSKERKAQLTSQAMGQDAVESQLMPRLVEALNCEIHQGNVVHDVTEALEWLKSTFFYVRVRRAPAKYGLRGAMTPAQLERNLKERVLKALGQLAAASVVTLDEDGVGIGATAAGAIFSRYMVTFSTMERIQA--------SALTSCACC 624
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Match: A0A7S3VEU1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VEU1_9STRA) HSP 1 Score: 421 bits (1083), Expect = 2.260e-126 Identity = 279/765 (36.47%), Postives = 408/765 (53.33%), Query Frame = 1
Query: 16 LLNVRDLYPP---ELSRIWK--FKTFNSIQSALHPTVARTDRSVVISAPTGCGKTVALEMAVVRL-LQESGMSFGN------------KKIIYISPIKALCQQTLEDWNLKFSPLG--VRLSELTSDST--SYSGSLRDLASADIIVTTPEKWDSVTRRWKDHAFLVGTVALVLVDEVHTIGEE-RGATLEVILTRMKSVARSPEVVSMGLPASR------------------------MRFLALSATLPNAADIGAFIRA-EVFEFGPEYRPVPLQTHVVGYY-AGDNPFLFDRGLNKHVAGMVSRYSGGKPTLIFCGSKKDTETVAAELAKKDYAASGRSQVIMQYLWKAGEDAEDSQLGRLIRKGVAVHNSGLSPRDRGLVEKAFLTGSLSVLVSTTTLAMGVNLPARLVIIKGTNHYRGA-KGYQELPRSAILQMMGRAGRPGFDSSGVAVVMTSQANKRALERMSSGQEAVESSLRARLLEALNSE--------------------------------------------------------LHEAGVIAMDDDEFSASSTPHGVLFSRFMVRFESMKAIMALKENHGTMNILQLCASCEELSVPVRRNEKRVLNELNKQVRFP----PAKKAIIRTPADKALALIQAALGGLAIEDWTMRGEQGSMLEIAARILGCCAESLAVPGRGGGLGCAVCLRLARSVRLKMWMDTELGQLRQLPGVGDQICLRLGTSQIVTLLDVAKTSPAKIDTIANRKHPHG 1980
++ V D++P ++ +WK F +FN++QS L + +D +VV+SAPTG GKT EMA+ RL + + S GN +KI+YISP KAL Q DW + + + + +T D++ S++ S + +ASA II+TTPEKWDS+TR+W DH +L+G+V L+L+DEVH +G+E RG LE I+ RMK+V R+ G +S+ MRF+A+SATLPN DI FI A E + F YRPVPL+THVVG G N FLFD+ L+KHV ++ R+S KP++IFC +KK TET+A+ L +S S + + S L + ++KG+A H++G+ +R LVE+ F G + L +T+TLAMGVNLPA LV+IKGT +RGA +GY+++ +LQMMGRAGRPGFD+SG AV+MT + +KR ERMS G + VES L L+E LN+E LH +I + D S + SR MV F+ MK I++L + G + IL++ + E + PVRR EK LN +K V+ P K ++T + K ++Q+A+G +ED+T+R E +E A+R+L AE ++ G CL + R + +W ++ G L QL GVG + +L + I + D+ S +I+ RK P G
Sbjct: 508 MIPVTDMFPLCHIPMANLWKNEFHSFNNMQSELAQVLVHSDDNVVVSAPTGAGKTCVFEMAMGRLFVNDCSRSIGNGATSTCQAIPNDRKIVYISPSKALLSQRFADWTKRLADVDPTIECVVVTGDASVSSHTKSFQSVASAHIILTTPEKWDSMTRKWTDHLYLIGSVKLLLMDEVHLLGDESRGGCLEAIICRMKTVQRAAIAKKRGQESSKLVNSKEHIYDSRNNGSIIEALGTNMRFVAVSATLPNIGDIANFIDAHEAYNFDSSYRPVPLETHVVGLGDIGKNQFLFDKSLDKHVLDLLRRFSNNKPSIIFCHTKKQTETLASHLCSAYGDSSNNSTRL-----NMSKRTNLSSLQQCLKKGIAFHHAGMESDNRHLVEEMFTMGLIRCLCATSTLAMGVNLPAHLVMIKGTTVWRGAGQGYKDIDSGTLLQMMGRAGRPGFDTSGTAVIMTDRKSKRNYERMSDGLDIVESQLLKNLIETLNTEISQCVIKNVQEAIDWLKGTFFFLRVRKNPRHYGLFGKSEQELETYLLQQCTDSLQNLHINKLIELGDQGKSIVPRKASHVMSRHMVAFDGMKVIVSLPHDAGQLQILKMLSEFEGIHFPVRRAEKTQLNNAHKMVKHKLQGGPPSKIRVQTSSQKTFIMLQSAIGQQYLEDYTLRQEMNLSVEYASRMLSA-AEDFSIEESKHGKVALECLLMRRCLATSLWGSSD-GVLNQLRGVGLKTTAKLTMNNIRSFADIISKSSNEIEQACGRKSPFG 1265
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Match: W7TR70_9STRA (Meiosis-specific DEAD-box helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR70_9STRA) HSP 1 Score: 382 bits (980), Expect = 1.180e-119 Identity = 255/665 (38.35%), Postives = 356/665 (53.53%), Query Frame = 1
Query: 58 IWKFKTFNSIQSALHPTVARTDRSVVISAPTGCGKTVALEMAVVRLLQES-GMSFGNK--KIIYISPIKALCQQTLEDWNLKFSP-LGVRLSELTSDSTSYSGSLRDLASADIIVTTPEKWDSVTRRWKDHAFLVGTVALVLVDEVHTIGEE-RGATLEVILTRMKSVARSPEVVSMGLPASRMRFLALSATLPNAADIGAFIRAE---VFEFGPEYRPVPLQTHVVGYYAGDNPFLFDRGLNKHVAGMVSRYSGGKPTLIFCGSKKDTETVAAELAKKDYAAS------------GRSQVIMQYLWKAGEDAEDSQLGRLIRKG---VAVHNSGLSPRDRGLVEKAFLTGSLSVLVSTTTLAMGVNLPARLVIIKGTNHYRGA-KGYQELPRSAILQMMGRAGRPGFDSSGVAVVMTSQANKRALERMSSGQEAVESSLRARLLEALNSE----------------------------------LHEAGVIAMDDDE------------------------------FSASSTP-------------HGVLFSRFMVRFESMKAIMALKENHGTMNILQLCASCEELSVPVRRNEKRVLNELNKQVRFPPAKKAIIRT---PADKALALIQAALGGLAIEDWTMRGEQGSMLEIAARILGCCAE 1740
+W ++ N +QSA P TD +VVI+APTG GKT+ALE A+ RLLQE G G K K +Y++P+KALCQQ L DW +F G++ +ELT DS +R++A++ II+TTPEK+D+V+R W+D+ +L+G+V LVL+DE H +GE+ RG+ LE ++ R++ + ++ GLPAS++R LA SATLPN DIG ++ A F F +RPVPL+ HV+GY NPFLF R L ++ RYS GK TL+FCGSKK E +A +LA+ GRSQ ++ + + ++ +L L+ VA H++GL+ DR VE F G + L ST+TLA G+N PA L II GT +RGA GY++LP SA+LQM+GRAGRPG D GVAV+MTS+ + M+ GQE VES L AR E+LN+E L G I D D S P G + S+ +V FE++K + A+ + +L C C E+ PVR+ EKR LN+L K+VRF +K I+ P+ KA L+QA LG L I D+T++ M I++ CAE
Sbjct: 56 LWPYRILNEVQSAFWPVCFNTDHNVVIAAPTGVGKTMALEAAICRLLQEDEGTGNGRKTWKAVYVAPVKALCQQRLVDWQRRFETRFGLKCAELTGDSAG----MREVAASQIILTTPEKFDAVSRDWRDNLYLLGSVRLVLIDEAHFLGEDPRGSALEALICRLRVMKSHKVIMDKGLPASKLRILAASATLPNVEDIGRWLEAPPEATFNFDYTHRPVPLEIHVLGYANASNPFLFQRTLEGRAPEVIGRYSEGKATLVFCGSKKGAEALATKLAEAGSGLGLGNKQLGRGGMQGRSQQRLEA--ERFSNIQNHKLKDLLLTSDGAVAFHHAGLTAEDRTCVETLFQQGVVRTLCSTSTLAQGINSPAFLAIILGTTFWRGAGTGYEDLPVSAVLQMIGRAGRPGNDDRGVAVIMTSKEKELMYMSMAEGQEVVESQLPARFHESLNAEVCSNVISDLGGAIRWLRSTFLWVRAHRNPDYYTALLPRGTICRDADNSIGEYLKAYMLRILAELQAENVLRLEKTVGLSRDGAPIDNLETENIVPLVAGRVMSKTLVSFETIKVLRAVPSDASLEALLYACCGCPEVCNPVRKAEKRPLNDLLKRVRF--SKGLGIKKCTHPSHKAFVLVQACLGNLEIVDFTLKVSDNPMCLISS----VCAE 708
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Match: UPI00106A82FD (probable ATP-dependent DNA helicase HFM1 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A82FD) HSP 1 Score: 382 bits (981), Expect = 3.010e-116 Identity = 257/712 (36.10%), Postives = 376/712 (52.81%), Query Frame = 1
Query: 67 FKTFNSIQSALHPTVARTDRSVVISAPTGCGKTVALEMAVVRLLQESGMSFGNKKIIYISPIKALCQQTLEDWNLKFSPLGVRLSELTSDSTSYSGSLRDLASADIIVTTPEKWDSVTRRWKDHAFLVGTVALVLVDEVHTIGEE-RGATLEVILTRMKSV--ARSPEVVSMGLPASRMRFLALSATLPNAADIGAFIRAE-----VFEFGPEYRPVPLQTHVVGYYA--GDNPFLFDRGLNKHVAGMVSRYSGGKPTLIFCGSKKDTETVAAELAKKDYAASGRSQVIMQYLWKAGEDAEDSQLGRLIRKGVAVHNSGLSPRDRGLVEKAFLTGSLSVLVSTTTLAMGVNLPARLVIIKGTNHYRGAKG-YQELPRSAILQMMGRAGRPGFDSSGVAVVMTSQANKRALERMSSGQEAVESSLRARLLEALNSE---------------------------------------------------------LHEAGVIAMDDDEFSASSTPHGVLFSRFMVRFESMKAIMALKENHGTMNILQLCASCEE-LSVPVRRNEKRVLNELNKQ-----VRFPPAKKAIIRTPADKALALIQAALGGLAIEDWTMRGEQGSMLEIAARILGCCAESLAVPGRGGGLGCAVCLRLARSVRLKMWMDTELGQLRQLPGVGDQICLRLGTSQIVTLLDVAKTSPAKIDTIANRKHPHG 1980
F FN +QS + V TD+ VV+ +PTG GKTV E+A++RL+ N KI+Y++P+KALC + EDW+ KF +G++ ELT DS +L SA+I++TTPEKWDS+TR+WKD+ LV V L L+DEVH + +E RG T+E +++RMK+V A S + + MRFLA+SAT+PNA DIG ++ E + YRPV L V+GY G + F FD LN ++ ++ +YS KPTL+FC ++K T+ A+ L K D+ S+ Q L + DS+L L+ GVA H++GL DR VE F G L VL +T+TLAMGVNLPA LVIIK T Y KG ++E S ILQM GRAGRP FD S AV+MT + NK + + G + +ESSL L+E LN+E L + G++ MD+ F + T G L +R+ + FES+K +AL+ + +++ + C+E + + +R NEKRVLN LNK +RFP I+T K L QA LG L I ++++ + + R+ C E + L A L+L++ + ++W +++ +Q+ VG + L + + T + +T+P KI+ I NR P G
Sbjct: 180 FPYFNFVQSKVLDDVLYTDKPVVVCSPTGSGKTVVFELAIIRLMMNFLDRGKNFKIVYMAPMKALCSERYEDWSKKFGTVGMKCKELTGDSEM--DDYLELQSANIVMTTPEKWDSMTRKWKDNRSLVQAVKLFLIDEVHLLNDESRGPTMEAVISRMKTVKTAESRASNQKEIFGANMRFLAISATIPNAEDIGKWLETEKHPAAAYSMDDSYRPVKLHKVVIGYSCSEGTSNFRFDLSLNYKLSSIIQKYSENKPTLVFCSTRKGTQQAASTLIK-DHRFVMNSEH-RQRLQRCANSLHDSKLRELVMSGVAYHHAGLDSSDRKSVEAMFTNGELPVLFATSTLAMGVNLPAHLVIIKSTMQY--VKGVFEEYAESQILQMTGRAGRPQFDDSATAVIMTKECNKIKYQAIIGGTQNIESSLHKNLIEHLNAEIVLNTITDVSIALEWLKSTFLYIRILKNPTYYGIPEGLDMDVLEKKLQEMCVESLNTLRDHGLVNMDEG-FDLTPTDTGKLMARYCIAFESIKLFLALEGDEDLNDLVNVVCQCKEFVDLKLRTNEKRVLNTLNKDKNRVTIRFP--MNGRIKTTEQKISCLFQATLGCLPINEFSLNQDVTKIFRSGQRVSKCLYEFCMLQTNYNLLMNA--LQLSKCFKSRIWENSKYVS-KQIEKVGLTLSTMLVNAGLTTFQKIEETNPRKIELILNRHPPFG 879
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Match: A0A4P9WXD8_9FUNG (DEAD-domain-containing protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9WXD8_9FUNG) HSP 1 Score: 372 bits (955), Expect = 1.570e-115 Identity = 249/726 (34.30%), Postives = 374/726 (51.52%), Query Frame = 1
Query: 40 PPELSRIWKFKTFNSIQSALHPTVARTDRSVVISAPTGCGKTVALEMAVVRLLQESGMSFGNK-KIIYISPIKALCQQTLEDWNLKFSPLGVRLSELTSDSTSYSGSLRDLASADIIVTTPEKWDSVTRRWKDHAFLVGTVALVLVDEVHTIGE-ERGATLEVILTRMKSVARSPEVVSMGLPASRMRFLALSATLPNAADIGAFIRAE-------VFEFGPEYRPVPLQTHVVGYY-AGDNPFLFDRGLNKHVAGMVSRYSGGKPTLIFCGSKKDTETVAAELAKKDYAASGRSQVIMQYLWKAGEDAEDSQLGRLIRKGVAVHNSGLSPRDRGLVEKAFLTGSLSVLVSTTTLAMGVNLPARLVIIKGTNHYRGAKGYQELPRSAILQMMGRAGRPGFDSSGVAVVMTSQANKRALERMSSGQEAVESSLRARLLEALNSEL--------------------------------------HEAGVIAMDD-----------------------DEFSASSTPHGVLFSRFMVRFESMKAIMAL--KENHGTMNILQLCASCEELSVPVRRNEKRVLNELNKQVRFPPAKKAIIRTPADKALALIQAALGGLAIEDWTMRG-----EQGSMLEIAARILGCCAESLAVPGRGGGLGCAVCLRLARSVRLKMWMDTELGQLRQLPGVGDQICLRLGTSQIVTLLDVAKTSPAKIDTIANRKHPHGH 1983
PP + +KTFN++QS + + +DR+ V+SAPTG GKTVALE+A++R L +S GN+ KI+YI+P KALC + DW+ + P + ++E+T DS G + DL A +IV TPEKWD+ TRRWKDH L+ + L +VDE+H + E +RGATLE I++RM++V S V R+RF+A+SAT+PN DI ++R E V +FG EYRPVP++ V G +G+NP+ FD+ L+ + G + ++S KPTLIFC ++K T + A LAK A D L L+ G+ H+ GL DR +E+ FL G L V+ +T+TLA+GVNLPA LVIIK T Y + E +LQM+GRAGRP FD GVA+++T+ + +++ SGQE +ES L L+E LN+E+ HEAG+ A + D ST +G L ++F + +++ A+ + +++H +I+ L SC+E +K +LN LNK K I+ DK +IQA LGG + ++ E +++ AAR+ + GR + L L +S+ + W D G +RQ+ +G + +L + I++L + P +I+ ANR P GH
Sbjct: 34 PPPYQSFFPYKTFNAVQSEVFDLMLHSDRNAVVSAPTGSGKTVALELALIRALSQSD---GNRAKIVYIAPTKALCNERTRDWSSRLRPHNITVAEMTGDSIGP-GQMSDLQRAQVIVATPEKWDATTRRWKDHRLLMSLIRLFMVDEIHMLNEAKRGATLEAIVSRMRTVISSSHV--------RLRFIAISATVPNVVDIAQWLRDEPSGNPAAVCQFGEEYRPVPIRKEVFGISTSGNNPWFFDKALDGMLMGYIEQFSDEKPTLIFCPTRKSTTSAADALAKASIHAR----------------ITDRVLKPLVLLGIGFHHGGLGFDDRRTLEQTFLQGHLLVICTTSTLAVGVNLPAHLVIIKSTVQYLNGR-QSEYSDLDVLQMIGRAGRPQFDVDGVAIILTTLERESFYQQIVSGQEVIESGLHEHLIEHLNAEVVLDSVHTPAEAMRWLQSTFLWVRIQKNPAYYRLRHVTQHEAGLHAEERLAAMCQRNLHLLEEGQLVQRSPYDNTQLLSTEYGQLTAKFYLSYKTGVALSQVPPEKSHTLADIISLIVSCDEFEDTRFHQDKGILNALNKHPTIRFRIKGKIQQVTDKINLIIQATLGGTPLTEFKAATAATTLEINRIMQQAARLASAAVSFALLTGRVDYI--LSTLHLHQSITARAWYDMP-GIVRQVDQIGPALANQLAANDIISLARLRAMHPQEIEFAANRNPPFGH 727
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Match: A0A7S2P7W6_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7W6_9STRA) HSP 1 Score: 386 bits (991), Expect = 1.650e-115 Identity = 250/705 (35.46%), Postives = 385/705 (54.61%), Query Frame = 1
Query: 109 VARTDRSVVISAPTGCGKTVALEMAVVRLL-------QESGMSFG--NKKIIYISPIKALCQQTLEDWNLKFSPL--GVRLSELTSDSTSYSGSLRDLASADIIVTTPEKWDSVTRRWKDHAFLVGTVALVLVDEVHTIGE-ERGATLEVILTRMKSVAR--------SPEVVSMGLPA-------SRMRFLALSATLPNAADIGAFIRA-EVFEFGPEYRPVPLQTHVVGY-YAGDNPFLFDRGLNKHVAGMVSRYSGGKPTLIFCGSKKDTETVAAELAKKDYAASGRSQVIMQYLWKAGEDAEDSQLGRLIRKGVAVHNSGLSPRDRGLVEKAFLTGSLSVLVSTTTLAMGVNLPARLVIIKGTNHYRGA-KGYQELPRSAILQMMGRAGRPGFDSSGVAVVMTSQANKRALERMSSGQEAVESSLRA--RLLEALNSELHEA---------------------------------------------------------GVIAMDDDEFSASSTPHGVLFSRFMVRFESMKAIMALKENHGTMNILQLCASCEELSVPVRRNEKRVLNELNKQVRFP---PAKKAIIRTPADKALALIQAALGGLAIEDWTMRGEQGSMLEIAARILGCCAESLAVPGRGGGLGCAVCLRLARSVRLKMWMDTELGQLRQLPGVGDQICLRLGTSQIVTLLDVAKTSPAKI 1947
+A +D +V++SAPTG GKT EMA+ RL + G++ G + K++YI+P KALC + +DW+ + + + + + +T D+ + S S ++A A +I+TTPEKWDS+TRRW D+ L+G+V L+LVDEVH IGE +RG+ LE +++RMK++ R S E+ S S MR +A+SATLPN + +F+ + E + F YRPVPL V + G N +LFD+ L++HV ++ R+S G+P ++FC SKK+TET+A+EL+K A + + ++ K L + + +G+A H++GL DR +VE+AF +GSL L +T+TLAMGVNLPA LV+IKGT+ YRGA G+Q++ +LQM+GRAGRPGFD SG AV+MT +K E +S G + VES L L E LN+E+ + ++ DD FS + + SR + FE+MK+I+ L + G + +L + + CE++ PVRR EK+ LNE K V++ P K I+TP KA L+Q+++G D ++R E ++L+ A RIL E V R G + L + R++ +W + + G L Q+ G+ ++ +L + I T D +S +I
Sbjct: 1 MANSDDNVIVSAPTGAGKTALFEMAISRLFALKLNGQSQRGVNGGVSSVKVVYIAPNKALCDERQQDWSNRLAHIDRSIVCTTITGDANATS-SYGEIAKAHLILTTPEKWDSITRRWNDYVVLLGSVKLMLVDEVHMIGEKDRGSCLESVISRMKTIQRAASSRMLTSYEIASSSFKQAQPNDLMSNMRIVAVSATLPNLGQLASFVESGEAYVFDDSYRPVPLSIFVQACGHIGKNRYLFDKSLDQHVPSILKRFSSGRPAIVFCHSKKETETLASELSKSYTAPTKLNDSALR---KFAGQTNTPSLQKCLLRGIAFHHAGLDASDRRIVEEAFTSGSLFCLCATSTLAMGVNLPAFLVVIKGTSAYRGAANGHQDIDMGTLLQMVGRAGRPGFDKSGTAVIMTDSLSKTRYENISQGLKVVESHLLESNNLTECLNNEISQGVITCAEEAVDWIKHSLLFHRIQSNPLYYGLSGRGNDNIHSFLLAKCADSITKLSKIRAILEQDDGTFSPDAASR--IMSRNFIDFETMKSIVKLPHDCGPLQLLHMLSRCEKIQTPVRRAEKKELNEAYKLVKYKFEGPQSKIRIQTPEQKAFVLLQSSIGKYHFRDASLRREMSNILDGAFRILAAVEEYARVGSRNGQVAVQGWL-MRRALYSSLWGEKD-GVLNQINGISHEMTKKLTNNGIKTFADAMNSSSEEI 697
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Match: UPI001E1E1E76 (LOW QUALITY PROTEIN: probable ATP-dependent DNA helicase HFM1 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1E76) HSP 1 Score: 389 bits (999), Expect = 2.830e-115 Identity = 250/721 (34.67%), Postives = 386/721 (53.54%), Query Frame = 1
Query: 55 RIWKFKTFNSIQSALHPTVARTDRSVVISAPTGCGKTVALEMAVVRLLQESGMSFG-NKKIIYISPIKALCQQTLEDWNLKFSPLGVRLSELTSDSTSYSGSLRDLASADIIVTTPEKWDSVTRRWKDHAFLVGTVALVLVDEVHTIGE-ERGATLEVILTRMKSV--ARSPEVVSMGLPASRMRFLALSATLPNAADIGAF-----IRAEVFEFGPEYRPVPLQTHVVGYYAGDNP---FLFDRGLNKHVAGMVSRYSGGKPTLIFCGSKKDTETVAAELAKKD----YAASGRSQVIMQYLWKAGEDAEDSQLGRLIRKGVAVHNSGLSPRDRGLVEKAFLTGSLSVLVSTTTLAMGVNLPARLVIIKGTNHYRGAKGYQELPRSAILQMMGRAGRPGFDSSGVAVVMTSQANKRALERMSSGQEAVESSLRARLLEALNSE---------------------------------------------------------LHEAGVIAMDDDEFSASSTPHGVLFSRFMVRFESMKAIMALKENHGTMNILQLCASCEELS-VPVRRNEKRVLNELNKQ-----VRFPPAKKAIIRTPADKALALIQAALGGLAIEDWTMRGEQGSMLEIAARILGCCAESLAVPGRGGGLGCAVCLRLARSVRLKMWMDTELGQLRQLPGVGDQICLRLGTSQIVTLLDVAKTSPAKIDTIANRKHPHG 1980
RI+ F FN +QS + V TD+ +V+ +PTG GKT EMA+VRLL S +F N KI+Y++PIKALC + DW KF P G+R+ ELT D+ + +L +II+TTPEKWDS+TR+W+D+ ++ + L L+DE+H + + RG+ +E +++RMK++ AR + LP +RF+A+SAT+ N D+ + I A ++F RPV L+ V+GY+ +N F FD L+ +AG+++ YS KP LIFC ++K T AE+ KD Y S ++ +Q L +D++L L+ KG+ H++G+ +DR L+E+ F G L VLV+T+TLAMGVNLPA LV+IK T +Y +QE P + +LQM+GRAGRP FD+S AV+MT + K E + +G + +ESSL L+E LN+E LH +I MDD+ T G L +R+ + +++ + +A K + T +L + + CEE + +R NEK+ LN LNK +R+P + K I+T K LIQA LG L I+D+ ++ + + R+ C E L+ L A L L +S + ++W D++ +QL G+G + L + + + + +T+P +I+ I NR P G
Sbjct: 297 RIFNFPHFNIVQSKVFDDVMHTDKCLVLCSPTGSGKTAVFEMAIVRLLTRSDTTFNRNFKIVYMAPIKALCSERFSDWKAKFEPYGLRIMELTGDTDT--DEFYELQQVNIILTTPEKWDSMTRKWRDNKAVMNAICLFLIDEIHILNDPNRGSVVEAVVSRMKTIQAARHRSGGTSDLPV--LRFVAISATITNIEDLAQWLGHGKIPAIHYKFDDSVRPVRLRKVVLGYHFAENKQSEFQFDISLSYKLAGVINTYSDEKPVLIFCATRKSTMQ-GAEILSKDVKSLYVRSSEHRLTLQNL---SFHVKDAKLRDLVVKGIGYHHAGMDIQDRKLMEEIFAKGQLPVLVATSTLAMGVNLPAHLVVIKSTMYYNMGS-HQEYPDTQVLQMIGRAGRPQFDTSATAVIMTKNSTKMKYENLLNGTQLIESSLHKNLVEHLNAEIVLNTITDISVAVEWLKYTFLYIRVMKNPRHYGMPSGLTKQSIEKRLQDLCMKSLNQLHGLSLIQMDDENMDVRPTESGRLMARYCISYKTAELFLAFKGDESTQEMLNIISKCEEFEDIKLRNNEKKTLNTLNKDKNRITIRYPLSGK--IKTTDMKVNCLIQATLGSLLIQDFALQQDTARIFRAGIRVTRCLVELLSQKNNYKCLLSA--LLLCKSFKARLWEDSKYVS-KQLDGIGPTLSTALVNAGLTSFEKIEETNPREIELIVNRHPPFG 1003
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Match: A0A1Y2CRD5_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CRD5_9FUNG) HSP 1 Score: 377 bits (967), Expect = 3.390e-115 Identity = 248/724 (34.25%), Postives = 380/724 (52.49%), Query Frame = 1
Query: 25 VRDLYPPELSRIWKFKTFNSIQSALHPTVARTDRSVVISAPTGCGKTVALEMAVVRLLQESGMSFGNKKIIYISPIKALCQQTLEDWNLKFSPLGVRLSELTSDSTSYSGSLRDLASADIIVTTPEKWDSVTRRWKDHAFLVGTVALVLVDEVHTIGE-ERGATLEVILTRMKSVARSPEVVSMGLPASR-MRFLALSATLPNAADIGAFI-------RAEVFEFGPEYRPVPLQTHVVGYYA--GDNPFLFDRGLNKHVAGMVSRYSGGKPTLIFCGSKKDTETVAAELAKKDYAASG-------RSQVIMQYLWKAGEDAEDSQLGRLIRKGVAVHNSGLSPRDRGLVEKAFLTGSLSVLVSTTTLAMGVNLPARLVIIKGTNHYRGAKGYQELPRSAILQMMGRAGRPGFDSSGVAVVMTSQANKRALERMSSGQEAVESSLRARLLEALNSE-----------------------------------------------------LHEAGVIAMDDDEFSASSTPHGVLFSRFMVRFESMKAIMALKENHGTMNILQLCASCEELSVPVRRNEKRVLNELNKQVRFPPAKKAIIRTPADKALALIQAALGGLAIEDWTMRGEQGSMLEIAARILGCCAESLA------VPGRGGGLGCAVCLRLARSVRLKMWMDTELGQLRQLPGVGDQICLRLGTSQIVTLLDVAKTSPAKIDTIANR 1965
V +L ++ FK FN +QS ++D ++V+SAPTG GKT +E+A+VRL+ + KI+Y++P KALC + + DW KF LG+ ELT D+ S ++R++ ++IIVTTPEKWDS+TRRW+D+ L+ V L+L+DEVH + E RGA LEVI++RM++V +++ + +R LA+SAT PN DI ++ RAE FG E+RPV L HV GY A N F FD+ L+ + ++SR+S GKP L+FC ++K E+ AA+L + RSQ+ L + + D +L + G+A+H L+ +DR LVE F++G LS++ +T+TL++GVNLPA LVIIKGT YR GY E ++QMMGRAGRP FD SGV V+MT+ + E M SG+E +ESSL L+E LN+E L +A +I D+ + S T G + +++ VRFE+ + I+A+ + +L+ ++ E S RN+K LN LNK V++P + K ++T ++ LIQ LG + + + G ML + ++ AE L+ + V L ++ S+ K W ++ L+Q+ +G L + + T+ D + SP I+ I N+
Sbjct: 123 VAELKGDSFKAVFPFKLFNPMQSLCFDVAYKSDSNLVVSAPTGSGKTCVMELAIVRLISKPDGQHA--KIVYVAPTKALCSERVADWKNKFRMLGITCGELTGDTDS--ANVREVQQSNIIVTTPEKWDSMTRRWRDYKQLMELVQLILIDEVHLLNEPRRGAVLEVIVSRMRTVNAECAMMNPNRQNKKALRILAISATAPNIDDIAVWLKEADTGRRAECKVFGEEFRPVQLVKHVFGYPARMNTNDFQFDKVLDYRLGEVISRFSEGKPALVFCSTRKSVESAAAQLVSDSMPCTIGRDHPYIRSQLHQMELQELSQMVSDKKLAEYLPHGIAIHYGSLTQQDRALVESKFISGHLSIVCATSTLSVGVNLPAHLVIIKGTQQYRDT-GYAEYSELDVMQMMGRAGRPQFDDSGVVVIMTTVDKAKGYENMVSGKEIIESSLHENLIEHLNAEVCLGTIRNVELCIEWLKSTFLNVRMSKNPTRYKDPRDKQAASLDSMCMKDLNLLAQAQLIQQQDEGMTVSPTDFGRVMAKYYVRFETARDIIAISKGPSVKKLLECLSNSIEFSELKYRNDKTYLNTLNKVVKYPISGK--LKTVGERVNLLIQCCLGSVKFTEQKLVG----MLSLDTNVIMKHAERLSKFMFEVCQLKRDFQATEVALEISNSIHAKAW-ESNGHHLKQIESIGPVHAKALFDAGVRTVQDFLQKSPEHIEGILNK 834
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Match: A0A8J6AZC8_9EUKA (ATP-dependent DNA helicase HFM1 n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6AZC8_9EUKA) HSP 1 Score: 383 bits (983), Expect = 6.130e-115 Identity = 250/711 (35.16%), Postives = 366/711 (51.48%), Query Frame = 1
Query: 40 PPELSRIWKFKTFNSIQSALHPTVARTDRS--VVISAPTGCGKTVALEMAVVRLLQESGMSFGNKKIIYISPIKALCQQTLEDWNLKF-SPLGVRLSELTSDSTSYSGSLRDLASADIIVTTPEKWDSVTRRWKDHAFLVGTVALVLVDEVHTIGEERGATLEVILTRMKSVARSPEVVSMGLPASRMRFLALSATLPNAADIGAFI---RAEVFEFGPEYRPVPLQTHVVGYYAGDNPFLFDRGLNKHVAGMVSRYSGGKPTLIFCGSKKDTETVAAELAKKDYAASGRSQVIMQYLWKAGEDAEDSQLGRLIRKGVAVHNSGLSPRDRGLVEKAFLTGSLSVLVSTTTLAMGVNLPARLVIIKGTNHYRGAKGYQELPRSAILQMMGRAGRPGFDSSGVAVVMTSQANKRALERMSSGQEAVESSLRARLLEALNSE---------------------------------------------------------LHEAGVIAMDDDEFSASSTPHGVLFSRFMVRFESMKAIMALKENHGTMNILQLCASCEELSVPVRR-NEKRVLNELNKQVRFPPAKKAIIRTPADKALALIQAALGGLAIEDWTMRGEQGSMLEIAARILGCCAESLAVPGRGGGLGCAVCLRLARSVRLKMWMDTELGQLRQLPGVGDQICLRLGTSQIVTLLDVAKTSPAKIDTIANRKHPHG 1980
P E I+ + FN +QS + V + +++SAPTG GKT E+A++ L+ G G KIIY++PIKALCQ+ EDW + PLG+ T D +Y L L AD+I+ TPEKWDS TR++ D +VG L+L+DE+H + E RG TLE ++ R++++ SP+ L +R +A+SAT+PN DI A++ + + +F YRPVPL+ V+ Y + FLFDR L+ +A +V+RY+ GKPTLIFC ++K T A LA+ L ED L L+R+GV H++GLS DR VE AF+ G LSVL +T+TLA+GVNLPARLVIIKGT Y + +++ + QM+GRAGRP FD GVAVVMTS + E + + VES L A L E LN+E L EAG++ +D + + S T G RF V +++ +M L + G + +L+ + +E R +E++ LN L+K+VRFP K ++T K L+QA L L E++ +R E ++ + A RIL C + R G A L++ + ++W D + G LRQL GVG + L + + VA+ S K++ + +R P G
Sbjct: 283 PAEYQAIFPYPCFNRVQSEAYSAVMDDGAASNIILSAPTGSGKTTIFELAMLHLVMRHGRLNGAHKIIYLAPIKALCQERFEDWKERLCKPLGITAVLFTGDVETYR--LSHLTKADLIIATPEKWDSATRKYADQENVVGFTQLLLIDEIHLLNENRGPTLESLVARLRTLGGSPQFAGSAL--ETLRTIAVSATIPNIEDIAAWLGVRQTGLLKFDQSYRPVPLERRVLAYPEAKSEFLFDRNLDYKIADVVTRYAEGKPTLIFCSTRKGTVQTAQTLARDCELE----------LRHPNSTTEDQVLSELMRQGVGFHHAGLSMSDRRAVESAFIAGKLSVLCTTSTLALGVNLPARLVIIKGTTMYNNGR-WEQYDAMRVQQMVGRAGRPQFDHRGVAVVMTSADQRHRYEDIVNENVLVESGLHATLAEHLNAEVVIGTVGDRAAAVSWLRHTFYFIRALRVPARYGLPGALTPDAIQEHLLRVVDRALERLIEAGLVVLDGETGAISPTEAGRTVCRFYVALDTVAKLMELPTDAGLLGVLEAVSQAKEFEQQSSRMSERKTLNALSKKVRFPYKKS--VKTGPMKVCTLLQADLQSLDPEEFALRTEMFNLRDSAHRILMCARDLFVALKRPGPALSAA--GLSKGIASRLWPDADKGLLRQLDGVGPVMVRNLAEGGVTSFDHVAQASTIKLEHLCSRNPPFG 974 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2263.6024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2263.6024.1 >prot_H-paniculata_contig2263.6024.1 ID=prot_H-paniculata_contig2263.6024.1|Name=mRNA_H-paniculata_contig2263.6024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=662bp MQAPALLNVRDLYPPELSRIWKFKTFNSIQSALHPTVARTDRSVVISAPTback to top mRNA from alignment at H-paniculata_contig2263:616..17659- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2263.6024.1 ID=mRNA_H-paniculata_contig2263.6024.1|Name=mRNA_H-paniculata_contig2263.6024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=17044bp|location=Sequence derived from alignment at H-paniculata_contig2263:616..17659- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2263:616..17659- >mRNA_H-paniculata_contig2263.6024.1 ID=mRNA_H-paniculata_contig2263.6024.1|Name=mRNA_H-paniculata_contig2263.6024.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3972bp|location=Sequence derived from alignment at H-paniculata_contig2263:616..17659- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |