mRNA_H-paniculata_contig2259.6018.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Match: D7FSF6_ECTSI (Diphthine--ammonia ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF6_ECTSI) HSP 1 Score: 365 bits (938), Expect = 1.050e-122 Identity = 179/300 (59.67%), Postives = 218/300 (72.67%), Query Frame = 1
Query: 166 EIEEAHQTACGAGISHYVDPLSGYKVFTKDALARRFECCGNACRHCPFGHLEVKPERCSGVGGPKTILLAQHRAARKAKLTVGRQWDTF-EDKGPPRQVLFWSGGKDSFLTLRALQQENSLRREAGEEEEGPVTLLTTFDGASGMIAFQDTKATQITDVMLQAQHEDLDVLVVPLRKEYGPTCQSYNATLMAALKPLRIKCLAFGDLHLQDIRAWREQTFAGEYPLKFPIFGVPYEDLLSRLWAEVERGIDIRVSSVRPNLTGTEGMEVGSVYDKVFIAGLPETVDIMGENGEFHTHVSH 1062
+IEEAH AC AG++HY DP +GYKVFT+ + +R CCGNACRHCPFGHLEV PE PKT++LAQHR RK+KLTVG W F +D G R VLFWSGGKDSFLTLRALQ+ R E G E +TLLTTFDG +G I FQDTK ITDV+ QA+HE +D+L VPL GP +Y+ TL AALKPLR+K LAFGDLHLQ++++WR+ F+G YP +FP+F VPYE+LLSRLW E+ G+ ++VSSV + G EG+ VG VY + F+ LP+ VD MGENGEFHTHV H
Sbjct: 16 DIEEAHTAACNAGVAHYADPATGYKVFTQASHEKRGFCCGNACRHCPFGHLEVNPEWRLAGSVPKTVMLAQHRKQRKSKLTVGEGWKAFTDDGGGERTVLFWSGGKDSFLTLRALQKRK--REERGSER---ITLLTTFDGKTGKIPFQDTK---ITDVLEQARHEGVDLLAVPLGGGSGPFPDAYSVTLKAALKPLRVKALAFGDLHLQELKSWRQDVFSGAYPCEFPLFEVPYEELLSRLWEEIAAGVTLKVSSVSTDHKGLEGISVGDVYCEAFVKRLPDIVDAMGENGEFHTHVYH 307
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Match: A0A835YXG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG3_9STRA) HSP 1 Score: 258 bits (658), Expect = 1.220e-80 Identity = 147/303 (48.51%), Postives = 180/303 (59.41%), Query Frame = 1
Query: 166 EIEEAHQTACGAGISHYVDPLSGYKVFTKDALARRFECCGNACRHCPFGHLEVKPERCSGVGGPKTILLAQHRAARKAKLTVGRQWDTFEDKGP-PRQVLFWSGGKDSFLTLRALQQENSLRREAGEEEEGPVTLLTTFDGASGMIAFQDTKATQITDVMLQAQHEDLDVLVVPLRKEYGPT-CQSYNATLMAALKPL--RIKCLAFGDLHLQDIRAWREQTFAGEYPLKFPIFGVPYEDLLSRLWAEVERG-IDIRVSSVRPNLTGTEGMEVGSVYDKVFIAGLPETVDIMGENGEFHTHVS 1059
+IE+AH+ AC AG Y DP +GY VFT+ +R CCGN CRHCPF H V+ G KT+LL A +G P VLFWSGGKDSFLTLRALQ E R + G E V L+TT D SG +AFQ+T I DVM QA+ +D+L VPL+ T Y +MAAL+P RI+ L FGDLHL DIRAWRE TF YP +FP+F PY +L +RLWAE ERG I + VS+VR +L + +G+ YD F+ LP+ VD MGENGEFHTHV+
Sbjct: 8 DIEDAHKAACDAGEMAYSDPATGYTVFTELQHIKRGFCCGNGCRHCPFLHQNVEDPALRKNGPTKTVLLNDGSDASXXXXXXXXXXXXXSARGGGPLNVLFWSGGKDSFLTLRALQAEQ--RDDPGAPE---VMLITTCDAVSGTVAFQNTN---IRDVMDQAKALQVDLLAVPLKGGEASTGAGPYVDAVMAALEPFKQRIRALCFGDLHLVDIRAWREATFTDTYPCRFPLFNTPYAELKARLWAEAERGTISVTVSAVRDDLLEQGPLRIGAQYDAAFVGALPQGVDEMGENGEFHTHVA 302
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Match: A0A845CH29_9BACT (Diphthami_syn_2 domain-containing protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A845CH29_9BACT) HSP 1 Score: 175 bits (444), Expect = 3.580e-49 Identity = 115/298 (38.59%), Postives = 150/298 (50.34%), Query Frame = 1
Query: 181 HQTACGAGISHYVDPLSGYKVFTKDALARRFECCGNACRHCPFGHLEVKPERCSGVGGPKTILLAQHRAARKAKLTVGRQWDTFEDKGPPRQVLFWSGGKDSFLTLRALQQENSLRREAGEEEEGPVTLLTTFDGASGMIAFQDTKATQITDVMLQAQHEDLDVLVVPLRKEYGPTCQSYNATLMAALKPL-RIKCLAFGDLHLQDIRAWREQTFAG-----EYPLKFPIFGVPYEDLLSRLWAEVERGIDIRVSSVRPNLTGTEGMEVGSVYDKVFIAGLPETVDIMGENGEFHTHV 1056
H+ AC AG Y+DP +G++VFT+ L RR CCG+ CRHCP+ H V E + R AR+ G P VLFWSGGKDSFLT RAL++E+ E P+ LLTTFD S IA Q+ I V QA+H + +L VPL ++Y A + A + + +I FGDLHL+ IR WR + F L FP++G PYE L+ L A G VS+V G + +G +D+ + LPE VD GENGEFHT V
Sbjct: 10 HERACRAGEEFYLDPETGWRVFTEVGLRRRGSCCGSGCRHCPYAHEAVPVEE-------------RPRLARRPAWMTG-----VRPPQEPADVLFWSGGKDSFLTYRALRRES----------ERPIILLTTFDATSRKIAHQEL---DIELVARQAEHLGVPLLGVPLHPG-----EAYEARIAEAARMVPQIARFVFGDLHLEHIRDWRVEAFRELAADLSASLHFPLWGAPYEALMDDLEAS---GAVCEVSAVTEEARGV--VRIGQRFDRALMTALPEGVDRFGENGEFHTLV 266
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Match: A0A7X4E254_9BACT (Diphthami_syn_2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4E254_9BACT) HSP 1 Score: 175 bits (444), Expect = 3.900e-49 Identity = 120/303 (39.60%), Postives = 156/303 (51.49%), Query Frame = 1
Query: 157 RSVEIEEAHQTACGAGISHYVDPLSGYKVFTKDALARRFECCGNACRHCPFGHLEVKPERCSGVGGPKTILLAQHRAARKAKLTVGRQWDTFEDKGPPRQVLFWSGGKDSFLTLRALQQENSLRREAGEEEEGPVTLLTTFDGASGMIAFQDTKATQITDVMLQAQHEDLDVLVVPLRKEYGPTCQSYNATLMAALKPLRIKCLAFGDLHLQDIRAWREQTF---AGEY--PLKFPIFGVPYEDLLSRLWAEVERGIDIRVSSVRPNLTGTEGMEVGSVYDKVFIAGLPETVDIMGENGEFHT 1050
R + EAH+ A G SHY DP +G VFT L RR CCG+ CRHCPF H ++ VG T A + LT R D P +LFWSGGKDS L RAL +E P LLTTFD A+ ++A QD + QI + QA+H + +L VPL + + + A L P R+ FGDLHL+ IR WR+ TF A E L FP++GVPY++L++ L A G+ VS+V G +EVG +D+ I LP+ +D GENGEFHT
Sbjct: 4 RPTDWREAHRQAVELGESHYTDPDTGLHVFTSLGLERRGNCCGSGCRHCPFQHDSME------VGRRATW------AQQPVWLTDARPPDN------PVDLLFWSGGKDSLLAYRALVREGVR----------PAALLTTFDAATRVVAHQDVRLNQI---VRQAEHLGVPLLGVPLHPGHPYVDRIHEAV---GLVP-RVARFVFGDLHLEHIREWRDTTFRDLADELGATLHFPLWGVPYQELIADLEAS---GVPCEVSAVTEPAEGV--VEVGDWFDREMIERLPDRIDPFGENGEFHT 266
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Match: A0A1Y2C0D4_9FUNG (Diphthine--ammonia ligase (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C0D4_9FUNG) HSP 1 Score: 178 bits (451), Expect = 7.520e-49 Identity = 128/338 (37.87%), Postives = 172/338 (50.89%), Query Frame = 1
Query: 163 VEIEEAHQTACGAGISHYVDPLSGYKVFTKDALARRFECCGNACRHCPFGHLEVKPERCSGVGGPKTILLAQHRAARKAKLTVGRQWDTF----EDKGPPRQ---------VLFWSGGKDSFLTLRALQQENSLRREAGEEEEGPVTLLTTFDGASGMIAFQDTKATQITDVMLQAQHEDLDVLVVPLRKEYGPTCQSYNATLMAALKPLR-------------IKCLAFGDLHLQDIRAWREQTFAGEYPLKFPIFGVPYE-DLLSRLWAEVERGIDIRVS------SVRPNLTGTEGMEV---GSV-YDKVFI--AGLPETVDIMGENGEFHTHVS 1059
VEIEEAH AC A Y DP +GY V T L + ECCGNACRHCP+GH VK + K+ + + A +K L R T + + +Q VLFWSGGKDSFLTL L Q AG + + LLTTFD + + Q+ I D+ Q+ +L +L+VP + ++Y T+ AL+ L I+ L FGDL L+DIRAWRE +F+ YP +FP+F + ++ +L+ RLW E +IR+S V EG+E G+V Y K + + PETVD+MGE GEFHT VS
Sbjct: 64 VEIEEAHTAACAAKQQMYDDPATGYSVMTAWYLKEKQECCGNACRHCPYGHSRVK-DSTRRKNKIKSPVFLKPSATKKGTLDSIRNSTTITTLPDSRFSSKQEFESADGLIVLFWSGGKDSFLTLSTLLQN------AGPK--ASIVLLTTFDAETSKVPIQNIS---IGDISAQSSCLNLPLLLVP--RGADSKNETYIKTITDALEQLSREMSALDSSKSSTIQYLVFGDLFLEDIRAWRESSFSNLYPCRFPLFELDFQKNLMPRLWELCEE-YEIRISFSAMENEVMKKWVNDEGLEKDDEGNVRYTKSLVERSDFPETVDLMGERGEFHTKVS 386
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Match: UPI001C0D24C6 (DUF5522 domain-containing protein n=1 Tax=Polynucleobacter sp. AP-Melu-500A-A1 TaxID=2576929 RepID=UPI001C0D24C6) HSP 1 Score: 173 bits (438), Expect = 2.950e-48 Identity = 118/303 (38.94%), Postives = 158/303 (52.15%), Query Frame = 1
Query: 169 IEEAHQTACGAGISHYVDPLSGYKVFTKDALARRFECCGNACRHCPFGHLEVK-PERCSGVGGPKTILLAQHRAARKAKLTVGRQWDTFEDKGPPRQVLFWSGGKDSFLTLRALQQENSLRREAGEEEEGPVTLLTTFDGASGMIAFQDTKATQITDVMLQAQHEDLDVLVVPL--RKEYGPTCQSYNATLMAALKPLRIKCLAFGDLHLQDIRAWREQTFAGEYPLKFPIFGVPYEDLLSRLWA---EVERGIDIRVSSVRPNLTGTEGMEVGSVYDKVFIAGLPET-VDIMGENGEFHTHV 1056
IEE H+ C AG Y+DP+SGY+V T AL ++ CCGN+CRHCP+GH+ V PER K LLA V W DK +LFWSGGKDSFL L +L QE +RE V LLT+F + ++ Q+ I ++ Q++ L + +VPL +Y + Q A L++A I+ L FGDLHLQ IR WR T+ EY + P+F V YE LL RLW E+ I + + P T +EVG+ Y ++ + L +D M ENGE HT V
Sbjct: 4 IEELHRATCDAGRDTYIDPVSGYQVLTSKALLKQGACCGNSCRHCPYGHINVSDPERV------KQKLLAP----------VLMNW---ADKAKTIDILFWSGGKDSFLALASLLQE---KRE--------VVLLTSFGALTSRVSIQNI---HIKNIAKQSEFLKLPLCLVPLFPNTDYKASIQDALA-LISAQTGATIERLVFGDLHLQSIRQWRIDTWP-EYEIYTPLFNVSYEILLDRLWQLQKEMHLSITLSTDLILPKKT----LEVGTAYTELLVEQLKSNNIDAMLENGEAHTLV 267
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Match: A0A358DN45_9DELT (Diphthami_syn_2 domain-containing protein n=2 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A358DN45_9DELT) HSP 1 Score: 172 bits (437), Expect = 3.820e-48 Identity = 110/302 (36.42%), Postives = 154/302 (50.99%), Query Frame = 1
Query: 172 EEAHQTACGAGISHYVDPLSGYKVFTKDALARRFECCGNACRHCPFGHLEVKPERCSGVGGPKTILLAQHRAARKAKLTVGRQWDTFEDKGPPRQVLFWSGGKDSFLTLRALQQENSLRREAGEEEEGPVTLLTTFDGASGMIAFQDTKATQITDVMLQAQHEDLDVLVVPLRKEYGPTCQSYNATLMAALKPLRIKC----LAFGDLHLQDIRAWREQTFAG-----EYPLKFPIFGVPYEDLLSRLWAEVERGIDIRVSSVRPNLTGTEGMEVGSVYDKVFIAGLPETVDIMGENGEFHT 1050
E+ H AC G Y DP +GY VFT AL RR +CCG CRHCP+GH EV P+ + +L HR W + P +LFWSGGKDS+LTLRAL++E + P LLTTFDG S +A Q+ +I Q + ++VPL G Y ++ ++ L+ + L FGDLHL +R WRE F+ P+ P++G+PYE+LL+ L + + RVS+V T + + VG ++++ IA LP+ D GENGEFH+
Sbjct: 6 EKLHLKACSQGALTYSDPRTGYPVFTALALERRGDCCGCGCRHCPYGHQEVTPDE-------RAML---HRDP----------WIEGDLPTGPVDLLFWSGGKDSYLTLRALEREAT----------NPTVLLTTFDGRSEQVAHQEVLVQEIRH---QRKRLGCAQVLVPLFPGTG-----YMDRVLLGIQTLQFRTPVARLVFGDLHLDHVRTWREDAFSACSDIASIPIHLPLWGIPYEELLNDLESAP---VQARVSAVADE-TCAQVISVGDLFNRDLIARLPKGTDAFGENGEFHS 265
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Match: UPI001C0B1111 (DUF5522 domain-containing protein n=1 Tax=Polynucleobacter sp. 15G-AUS-farblos TaxID=2689094 RepID=UPI001C0B1111) HSP 1 Score: 172 bits (436), Expect = 6.010e-48 Identity = 115/306 (37.58%), Postives = 155/306 (50.65%), Query Frame = 1
Query: 160 SVEIEEAHQTACGAGISHYVDPLSGYKVFTKDALARRFECCGNACRHCPFGHLEVKPERCSGVGGPKTILLAQHRAARKAKLTVGRQWDTFEDKGPPRQVLFWSGGKDSFLTLRALQQENSLRREAGEEEEGPVTLLTTFDGASGMIAFQDTKATQITDVMLQAQHEDLDVLVVPLRKEYGPTCQSYNATLMAALKPL------RIKCLAFGDLHLQDIRAWREQTFAGEYPLKFPIFGVPYEDLLSRLWAEVERGIDIRVSSVRPNLTGTEGMEVGSVYDKVFIAGLPET-VDIMGENGEFHTHV 1056
S +I+E H+ AC AG Y+DP SGY+V T AL R+ CCGN+CRHCP+GH+ V G P L Q A V W K VLFWSGGKDSFL L L QEN V LLT+F + ++ QD I ++ QA+ L + +VPL Y A++ AL + I+ L FGDLHLQ IR WR T+ +Y + P+F VPYE LLS LW ++++ +D+ ++ E + G+ Y + + L E+ +D M ENGE HT V
Sbjct: 2 STDIDELHRAACAAGRDTYIDPASGYQVLTSKALLRKGSCCGNSCRHCPYGHINV--------GDPN--LTKQSMAG-----PVLMNWS---GKDQNIDVLFWSGGKDSFLALDHLIQENK-----------KVILLTSFGALTSRVSIQDI---HIKNIAKQAEFFKLALCLVPLSPN-----TDYKASIQEALDLISTQTGAHIERLVFGDLHLQSIRQWRVDTWP-QYLIYTPLFDVPYEKLLSNLW-KLQKNMDLEITLSTELALPHEVLAAGASYTQDLVKKLQESNLDAMLENGEAHTLV 268
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Match: UPI001C0C0339 (DUF5522 domain-containing protein n=1 Tax=Polynucleobacter sp. AP-Latsch-80-C2 TaxID=2576931 RepID=UPI001C0C0339) HSP 1 Score: 172 bits (435), Expect = 8.690e-48 Identity = 108/303 (35.64%), Postives = 155/303 (51.16%), Query Frame = 1
Query: 169 IEEAHQTACGAGISHYVDPLSGYKVFTKDALARRFECCGNACRHCPFGHLEVKPERCSGVGGPKTILLAQHRAARKAKLTVGRQWDTFEDKGPPRQVLFWSGGKDSFLTLRALQQENSLRREAGEEEEGPVTLLTTFDGASGMIAFQDTKATQITDVMLQAQHEDLDVLVVPLRKEYGPTCQSYNATLMAALKPL------RIKCLAFGDLHLQDIRAWREQTFAGEYPLKFPIFGVPYEDLLSRLWAEVERGIDIRVSSVRPNLTGTEGMEVGSVYDKVFIAGLPET-VDIMGENGEFHTHV 1056
IE H AC AG Y+DP +GY+V T AL R+ CCGN+CRHCP+GH+ V +R ++ V W + K VLFWSGGKDSFLTL L QE V LLT+F + ++ Q+ I ++ Q++ L + +VPL Y A++ AL+ + +I+ L FGDLHLQ IR WR T+ EY + P+F +PYE LL+RLW ++++ +D+ ++ E + +G+ Y ++ + L E VD M ENGE HT V
Sbjct: 4 IEALHLAACEAGRDTYLDPATGYQVLTSKALLRQGACCGNSCRHCPYGHINVSDP---------------NRIKQQLASPVLMNWSS---KAKSIDVLFWSGGKDSFLTLAGLLQEKRT-----------VVLLTSFGSITNRVSIQNI---HIKNIAKQSEFLKLPLCLVPLAPN-----TDYKASIQEALQMIIAQTGAKIERLVFGDLHLQSIRQWRVDTWP-EYEIATPLFDLPYEGLLNRLW-QLQKEMDLSITLSTELSLAKETLAIGTPYTQLLVEQLKENNVDAMLENGEAHTLV 267
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Match: UPI001BFE4E2C (DUF5522 domain-containing protein n=1 Tax=unclassified Polynucleobacter TaxID=2640945 RepID=UPI001BFE4E2C) HSP 1 Score: 171 bits (432), Expect = 2.560e-47 Identity = 107/305 (35.08%), Postives = 158/305 (51.80%), Query Frame = 1
Query: 163 VEIEEAHQTACGAGISHYVDPLSGYKVFTKDALARRFECCGNACRHCPFGHLEVKPERCSGVGGPKTILLAQHRAARKAKLTVGRQWDTFEDKGPPRQVLFWSGGKDSFLTLRALQQENSLRREAGEEEEGPVTLLTTFDGASGMIAFQDTKATQITDVMLQAQHEDLDVLVVPLRKEYGPTCQSYNATLMAALKPLR------IKCLAFGDLHLQDIRAWREQTFAGEYPLKFPIFGVPYEDLLSRLWAEVERGIDIRVSSVRPNLTGTEGMEVGSVYDKVFIAGLPET-VDIMGENGEFHTHV 1056
V + + H AC G S Y+DP +GY+V T DAL ++ +CCGN+CRHCP+GH+ V + + + +IL+ + K VLFWSGGKDSFLTL L EE+ V LLT+F + ++ QD I ++ Q++ + + +VPL Y + AL ++ I+ L FGDLHL+DIR WR T++ EY + P+FG PY++LLSRLW E RG+++ ++ T + G+ Y + L ++ +DIM ENGE HT V
Sbjct: 2 VNVGDLHLAACNEGRSTYIDPATGYQVLTSDALLKQGKCCGNSCRHCPYGHINVNNHKRTELQIANSILM------------------NWTPKEGGLDVLFWSGGKDSFLTLMHLL-----------EEKRNVVLLTSFGTLTNRVSIQDI---HIKNIAKQSEFLKIPLCLVPLYPN-----SDYKKAIEEALVMVQDRTSCSIERLVFGDLHLEDIRKWRVDTWS-EYEVFTPLFGTPYKELLSRLW-EYRRGMNLSITLSTDVKTVNGVLPTGTPYTPELVTELEKSNIDIMLENGEGHTFV 267 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2259.6018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2259.6018.1 >prot_H-paniculata_contig2259.6018.1 ID=prot_H-paniculata_contig2259.6018.1|Name=mRNA_H-paniculata_contig2259.6018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=354bp YGKLWYGSIRILYLNAASSYKCPSASSSIIPCRSWFTGRKLTLLKMDVYDback to top mRNA from alignment at H-paniculata_contig2259:15100..19981- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2259.6018.1 ID=mRNA_H-paniculata_contig2259.6018.1|Name=mRNA_H-paniculata_contig2259.6018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4882bp|location=Sequence derived from alignment at H-paniculata_contig2259:15100..19981- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2259:15100..19981- >mRNA_H-paniculata_contig2259.6018.1 ID=mRNA_H-paniculata_contig2259.6018.1|Name=mRNA_H-paniculata_contig2259.6018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2124bp|location=Sequence derived from alignment at H-paniculata_contig2259:15100..19981- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |