prot_H-paniculata_contig2258.6013.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2258.6013.1
Unique Nameprot_H-paniculata_contig2258.6013.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length255
Homology
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Match: D7FLZ5_ECTSI (40S ribosomal protein S4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLZ5_ECTSI)

HSP 1 Score: 484 bits (1245), Expect = 3.100e-172
Identity = 233/254 (91.73%), Postives = 246/254 (96.85%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGHFVLHRINSEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHDVVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEERAAKAKKALNN 254
            MKRLNAPKHWLLGKMEG+WAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGK+RTDVNFPAGFMDVVQI+KSGDLFRLLYNTKG FVLHRI+ EESKFKLCRVNKVE +KNKIPYLVTHDGRTIRYPDPLIKV+D +K+DLETGK I+TIKFEIGNVCMI+RGRNAGRVG+MQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTR MVSLPKGKGVKL+ILEE+AAK KKA NN
Sbjct:    9 MKRLNAPKHWLLGKMEGIWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKVRTDVNFPAGFMDVVQIQKSGDLFRLLYNTKGRFVLHRISEEESKFKLCRVNKVEMSKNKIPYLVTHDGRTIRYPDPLIKVNDTIKVDLETGKAIDTIKFEIGNVCMIARGRNAGRVGIMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRAMVSLPKGKGVKLTILEEKAAKIKKAQNN 262          
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Match: A0A835ZEV0_9STRA (40S ribosomal protein S4 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV0_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 2.640e-141
Identity = 190/253 (75.10%), Postives = 221/253 (87.35%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGHFVLHRINSEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHDVVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEERAAKAKKALN 253
            +KRLNAPKHWLLGK+EG+WAPKPS GPH  RECLPL+II+RNRLKYALT +EANMICMQK +KVDGK+RTD+NFPAGFMDVV IEKS D FRLLYNTKG FVLHR+  EE+K+KLCRV KVE +K KIP+LVTHDGRTIRYPDPL+KV+D +K+D+ETGK  +  K+EIGN+CMISRG N GRVG +QHIERHPGSFDIV+VKD AG+VFATR  NIF +G  TR  +SLP+GKGVKL+ILEERAA+ K+A N
Sbjct:    8 LKRLNAPKHWLLGKLEGIWAPKPSCGPHNGRECLPLIIIVRNRLKYALTKAEANMICMQKHVKVDGKVRTDLNFPAGFMDVVSIEKSADQFRLLYNTKGRFVLHRVKDEEAKYKLCRVQKVEVSKKKIPFLVTHDGRTIRYPDPLVKVNDSIKVDVETGKMSDIYKYEIGNLCMISRGHNTGRVGTIQHIERHPGSFDIVTVKDSAGNVFATRQANIFVLGESTRPAISLPRGKGVKLTILEERAARDKRAAN 260          
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Match: A0A7S2WPT4_9STRA (40S ribosomal protein S4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPT4_9STRA)

HSP 1 Score: 380 bits (976), Expect = 5.180e-131
Identity = 175/245 (71.43%), Postives = 210/245 (85.71%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGHFVLHRINSEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHDVVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEERA 245
            +KRLNAPK W+LGKMEG+WAP+PS GPH  RECLPL++I+RNRLKYALT+ E   ICMQ+L+K+DGK+RTD+ +PAGFMDVVQIE+SGDLFRLLY+ KG FVLHR+  +E  FKLCRV KV+ +  KIPY+VTHDGRTIRYPDPLIK +D VK+DL TGK I+ IKFEIG +CMI RGRNAGRVGV+QH+E+HPGSFD+++VKD AG VFATRL NIF +G   +  VSLPKGKG+KLSI+EERA
Sbjct:   25 LKRLNAPKAWMLGKMEGIWAPRPSAGPHKLRECLPLILILRNRLKYALTLQEVKAICMQRLVKIDGKVRTDMGYPAGFMDVVQIERSGDLFRLLYDVKGRFVLHRVKEDEGSFKLCRVMKVDVSAKKIPYVVTHDGRTIRYPDPLIKANDTVKVDLATGKIIDHIKFEIGRLCMIQRGRNAGRVGVIQHVEKHPGSFDMITVKDAAGKVFATRLGNIFVIGDDKKPWVSLPKGKGIKLSIVEERA 269          
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Match: A0A2D4CA31_PYTIN (40S ribosomal protein S4 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2D4CA31_PYTIN)

HSP 1 Score: 370 bits (949), Expect = 3.930e-127
Identity = 170/251 (67.73%), Postives = 209/251 (83.27%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGHFVLHRINSEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHDVVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEERAAKAKKA 251
            +KR++APKHW+LGK++G+WAP+PS GPH  RECLPLVII+RNRLKYALT  E   ICM KL+KVD KIR D +FPAGFMDV+++ KSGD FRLLY+TKG FVLHRIN+EE K+KLC+V + E+TK  IPY+ T+DGRTIRYPDPLIKV+D VK+DLETGK ++ IKFE GN+ M++ GRNAGRVG++ HIERH GSF+I  +KD AGH FATRL N+F +G+ +R  VSLPKGKG+KLSILEER  +  KA
Sbjct:    9 LKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLVIILRNRLKYALTKKEVTAICMNKLVKVDNKIRVDPDFPAGFMDVIELPKSGDAFRLLYDTKGRFVLHRINNEEKKYKLCKVTRQEYTKKAIPYIATNDGRTIRYPDPLIKVNDTVKVDLETGKVVDFIKFETGNLVMVTGGRNAGRVGILHHIERHEGSFNIAHIKDSAGHAFATRLGNVFVIGNESRPSVSLPKGKGIKLSILEERQIRESKA 259          
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Match: W7TUQ1_9STRA (40S ribosomal protein S4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUQ1_9STRA)

HSP 1 Score: 368 bits (944), Expect = 2.040e-126
Identity = 170/249 (68.27%), Postives = 211/249 (84.74%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGHFVLHRIN--SEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHDVVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEERAAK 247
            +KR+NAP+HW+L KM+G++AP+PS GPH  RE LPL++I+RNRLKYALT +EAN ICMQKL+KVDGK+RTD+NFPAGFMDV+ IEKSGD FRLLY+ KG F L R+   SEE  FKLCRVNK E + NKIPY+VTHDGRTIRYPDPLIK+ D VK+D+ TGK ++ IKF++GN+  ++RG N GRVG++QHIERHPGSFDI++VKD  GH FATR QN+F +G G + MVSLPKGKG+KLSI+EER+A+
Sbjct:    9 LKRVNAPRHWMLSKMDGIFAPRPSTGPHKLRESLPLILILRNRLKYALTKAEANAICMQKLVKVDGKVRTDLNFPAGFMDVITIEKSGDEFRLLYDVKGRFYLQRLEEGSEERNFKLCRVNKNEMSANKIPYIVTHDGRTIRYPDPLIKMDDTVKVDIRTGKILDFIKFDLGNLVYLTRGHNTGRVGMIQHIERHPGSFDIITVKDAQGHTFATRRQNVFVIGQGNKPMVSLPKGKGIKLSIVEERSAR 257          
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Match: F0WD75_9STRA (40S ribosomal protein S4 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WD75_9STRA)

HSP 1 Score: 368 bits (944), Expect = 2.110e-126
Identity = 170/253 (67.19%), Postives = 209/253 (82.61%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGHFVLHRINSEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHDVVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEERAAKAKKALN 253
            +KRL+APKHW+LGK++GVWAP+PS GPH  RECLPL+II+RNRLKYALT  E  MICMQK +KVDGKIR D NFPAGFMD+V+I KSGD FRLLY+TKG FVLHR+N EE K+KLC+V + E+TK  IPY+ T+DGRTIRYPDPL+K +D VKIDLETGK ++ IKFE GN+ M++RGRN G VG++  IERH GSF I  ++D  GH FATRL N+F +G+G+R  +SLPKGKG+KLSILEER+ + +K LN
Sbjct:    9 LKRLSAPKHWMLGKLDGVWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKAVKVDGKIRVDPNFPAGFMDIVEIPKSGDQFRLLYDTKGRFVLHRVNHEEKKYKLCKVIRQEYTKKGIPYVATNDGRTIRYPDPLVKSNDTVKIDLETGKIVDFIKFETGNLVMVTRGRNTGIVGMLHQIERHEGSFSIARIRDSTGHEFATRLGNVFAIGNGSRPWISLPKGKGIKLSILEERSVREQKNLN 261          
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Match: A0A5D6XRP7_9STRA (40S ribosomal protein S4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRP7_9STRA)

HSP 1 Score: 362 bits (928), Expect = 4.660e-124
Identity = 168/253 (66.40%), Postives = 208/253 (82.21%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGHFVLHRINSEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHDVVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEERAAKAKKALN 253
            +KR++APKHW+LGK++G+WAP+PS GPH  RECLPLVII+RNRLKYALT  E  MIC+ K +KVDGK+R D NFPAGFMDVV++ KSGD FRLLY+TKG FVLHR+++EE K+KL +V + E+TK  IPY+ T+DGRTIRYPDPLIKV+D VKIDLETGK ++ +K E GN+ MI+RGRN GRVG++ HIERH GSF+I  VKD AGH FATRL N+F +G  +R +VSLPKGKG+KLSI+EE A +  K  N
Sbjct:    3 LKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLVIILRNRLKYALTKQEVMMICLHKQVKVDGKVRVDPNFPAGFMDVVELAKSGDQFRLLYDTKGRFVLHRVSNEEKKYKLAKVTRQEYTKKAIPYVATNDGRTIRYPDPLIKVNDTVKIDLETGKIVDFVKLEAGNMVMITRGRNTGRVGILHHIERHEGSFNIAHVKDSAGHDFATRLGNVFVIGSESRPLVSLPKGKGIKLSIIEELAIRENKNKN 255          
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Match: A0A067CQF7_SAPPC (40S ribosomal protein S4 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQF7_SAPPC)

HSP 1 Score: 361 bits (927), Expect = 8.760e-124
Identity = 172/251 (68.53%), Postives = 206/251 (82.07%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGHFVLHRINSEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHDVVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEERAAKAKKA 251
            +KR++APKHW+LGK++G+WAP+PS GPH  RECLPL+IIIRNRLKYALT  E  MICMQKL+KVDGK R D NFPAGFMDVV+I KSGD+FRLLY+TKG FVLHRIN EE K+KL +V + EFT  +IPY+ T+DGRTIRY DPLIKV+D VKID+ETGK ++ IKFE G + MI+RGRNAGRVG++ HIERH GSF+I  +KD  G  FATR  N+F +G   R  VSLPKGKGVKLSILEER+ + +KA
Sbjct:    9 LKRMSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLIIIIRNRLKYALTKQEVTMICMQKLVKVDGKTRVDPNFPAGFMDVVEITKSGDVFRLLYDTKGRFVLHRINEEEKKYKLAKVTRQEFTAKQIPYVATNDGRTIRYADPLIKVNDTVKIDIETGKVVDFIKFETGAMVMITRGRNAGRVGILHHIERHAGSFNIAHIKDTTGAEFATRQGNVFAVGKDGRPWVSLPKGKGVKLSILEERSMREQKA 259          
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Match: M4BHJ4_HYAAE (40S ribosomal protein S4 n=21 Tax=Peronosporaceae TaxID=4777 RepID=M4BHJ4_HYAAE)

HSP 1 Score: 357 bits (917), Expect = 2.710e-122
Identity = 166/253 (65.61%), Postives = 209/253 (82.61%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGHFVLHRINSEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHDVVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEERAAKAKKALN 253
            +KRL+APKHW+LGK++G+WAP+PS GPH  RECLPL+II+RNRLKYALT  E  MICMQK +KVDGK+R D +FPAGFMDVV++ K+ D FRLLY+TKG FVLHR++ EE K+KL +V + E+TK  IPY+ T+DGRTIRYPDP+IKV D VKIDLETGK ++ IKFE+GN+  I+RGRN+GRVG++ HIERH GSF+I  VKD AG+ FATRL N+F +G  +R  VSLP+GKG+KL+ILE+R  K K+A N
Sbjct:    9 LKRLSAPKHWMLGKLDGIWAPRPSSGPHKLRECLPLIIILRNRLKYALTKQEVTMICMQKSVKVDGKVRVDPDFPAGFMDVVELPKTDDQFRLLYDTKGRFVLHRVSDEEKKYKLAKVIRQEYTKKAIPYIATNDGRTIRYPDPVIKVGDTVKIDLETGKVVDHIKFEVGNLVTITRGRNSGRVGILHHIERHQGSFNIAHVKDSAGNDFATRLGNVFVVGKESRPWVSLPRGKGIKLNILEQRELKEKRANN 261          
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Match: A0A7S2HY22_9STRA (40S ribosomal protein S4 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HY22_9STRA)

HSP 1 Score: 356 bits (914), Expect = 7.760e-122
Identity = 161/244 (65.98%), Postives = 203/244 (83.20%), Query Frame = 0
Query:    1 MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTMSEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGHFVLHRINSEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHDVVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIVSVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEER 244
            +KRLNAP+HW LGKM G+WAPKPSPGPH  RECLP+ I++R+RLKYALT  E   ICM++ +KVDGK+RTD NFPAGFMDV+++EKSGD FRLL++TKG FVLHRIN EE+ +KLCRVNKV  + NKIP  VTHDGRTIRYPDP +KV+D VK+D+E+GK  + +KFE+G++ MI+RGRNAGRVG + HIE+H GSFDIV+VKD  GH F+TRLQN+F +G G    V+L KG+G+K +I++ER
Sbjct:    9 LKRLNAPRHWNLGKMRGIWAPKPSPGPHKQRECLPITIVLRDRLKYALTNKECMQICMERCVKVDGKVRTDHNFPAGFMDVIELEKSGDRFRLLFDTKGRFVLHRINREEASYKLCRVNKVFVSANKIPVAVTHDGRTIRYPDPDVKVNDSVKVDIESGKMSDILKFELGSMVMITRGRNAGRVGTLMHIEKHEGSFDIVTVKDTKGHTFSTRLQNVFVIGSGNHPQVTLAKGRGIKKTIIQER 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2258.6013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLZ5_ECTSI3.100e-17291.7340S ribosomal protein S4 n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZEV0_9STRA2.640e-14175.1040S ribosomal protein S4 n=2 Tax=Tribonema minus T... [more]
A0A7S2WPT4_9STRA5.180e-13171.4340S ribosomal protein S4 n=1 Tax=Rhizochromulina m... [more]
A0A2D4CA31_PYTIN3.930e-12767.7340S ribosomal protein S4 n=3 Tax=Eukaryota TaxID=2... [more]
W7TUQ1_9STRA2.040e-12668.2740S ribosomal protein S4 n=2 Tax=Monodopsidaceae T... [more]
F0WD75_9STRA2.110e-12667.1940S ribosomal protein S4 n=1 Tax=Albugo laibachii ... [more]
A0A5D6XRP7_9STRA4.660e-12466.4040S ribosomal protein S4 n=1 Tax=Pythium brassicum... [more]
A0A067CQF7_SAPPC8.760e-12468.5340S ribosomal protein S4 n=3 Tax=Saprolegniaceae T... [more]
M4BHJ4_HYAAE2.710e-12265.6140S ribosomal protein S4 n=21 Tax=Peronosporaceae ... [more]
A0A7S2HY22_9STRA7.760e-12265.9840S ribosomal protein S4 n=1 Tax=Helicotheca tames... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 238..254
NoneNo IPR availableGENE3D3.10.290.40coord: 1..109
e-value: 5.7E-50
score: 170.0
NoneNo IPR availablePANTHERPTHR11581:SF040S RIBOSOMAL PROTEIN S4-RELATEDcoord: 1..251
NoneNo IPR availablePRODOMPD002667coord: 79..173
e-value: 1.0E-30
score: 332.0
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 35..98
e-value: 1.8E-4
score: 30.9
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 35..82
e-value: 5.3E-9
score: 35.6
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 34..106
score: 10.11
IPR005824KOWSMARTSM00739kow_9coord: 166..193
e-value: 0.0016
score: 27.7
IPR013843Ribosomal protein S4e, N-terminalPFAMPF08071RS4NTcoord: 1..28
e-value: 1.1E-14
score: 54.2
IPR038237Ribosomal protein S4e, central domain superfamilyGENE3D2.40.50.740coord: 114..164
e-value: 3.3E-25
score: 89.4
IPR013845Ribosomal protein S4e, central regionPFAMPF00900Ribosomal_S4ecoord: 88..160
e-value: 6.2E-32
score: 109.3
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 167..237
e-value: 9.6E-30
score: 104.2
IPR000876Ribosomal protein S4ePIRSFPIRSF002116RPS4a_RPS4ecoord: 1..233
e-value: 1.5E-89
score: 297.3
IPR000876Ribosomal protein S4ePANTHERPTHR1158130S/40S RIBOSOMAL PROTEIN S4coord: 1..251
IPR000876Ribosomal protein S4eHAMAPMF_00485Ribosomal_S4ecoord: 1..230
score: 32.186
IPR03227740S ribosomal protein S4, C-terminal domainPFAMPF1612140S_S4_Ccoord: 204..250
e-value: 1.8E-21
score: 75.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2258contigH-paniculata_contig2258:17199..20365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2258.6013.1mRNA_H-paniculata_contig2258.6013.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2258 15668..21053 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2258.6013.1 ID=prot_H-paniculata_contig2258.6013.1|Name=mRNA_H-paniculata_contig2258.6013.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=255bp
MKRLNAPKHWLLGKMEGVWAPKPSPGPHLNRECLPLVIIIRNRLKYALTM
SEANMICMQKLIKVDGKIRTDVNFPAGFMDVVQIEKSGDLFRLLYNTKGH
FVLHRINSEESKFKLCRVNKVEFTKNKIPYLVTHDGRTIRYPDPLIKVHD
VVKIDLETGKPIETIKFEIGNVCMISRGRNAGRVGVMQHIERHPGSFDIV
SVKDGAGHVFATRLQNIFTMGHGTRTMVSLPKGKGVKLSILEERAAKAKK
ALNN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR005824KOW
IPR013843Ribosomal_S4e_N
IPR038237Ribosomal_S4e_central_sf
IPR013845Ribosomal_S4e_central_region
IPR014722Rib_L2_dom2
IPR000876Ribosomal_S4e
IPR03227740S_S4_C