prot_H-paniculata_contig22551.6004.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22551.6004.1
Unique Nameprot_H-paniculata_contig22551.6004.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Match: D8LS05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS05_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 4.520e-20
Identity = 40/72 (55.56%), Postives = 55/72 (76.39%), Query Frame = 0
Query:   45 LGVVPINYLKDGQHPAIKPDEEYPEWLWHLPQMSKAKLSRIPEEEMTVEQQRRFLQLKSRDDIKDQNASSRF 116
            LGV PIN+LKDG+ P++ PDEEYPEWLW++   S A+L R  E++ T+++ RRF+QL SR+ IK QN S +F
Sbjct:   35 LGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRTKEDDYTLDEFRRFVQLDSREKIKRQNRSGKF 106          
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Match: A0A6H5JCL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL9_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 9.210e-20
Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 0
Query:   45 LGVVPINYLKDGQHPAIKPDEEYPEWLWHLPQMSKAKLSRIPEEEMTVEQQRRFLQLKSRDDIKDQNASSRF 116
            LGV PIN+LKDG+ P++ PDEEYPEWLW++   S A+L R  EE+ T+++ RRF+QL SR+ IK QN S +F
Sbjct:   75 LGVTPINFLKDGKDPSVMPDEEYPEWLWNMQLPSLARLKRKKEEDYTLDEFRRFVQLDSREKIKRQNRSGKF 146          
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Match: A0A1V9ZKD2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKD2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.400e-8
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   48 VPINYLKDGQHPAIKPDEEYPEWLWHL--PQMSKAKLSRIPEEEM-TVEQQRRFLQLKSRDDIKDQNAS 113
             P+N LKDG HP +KP EEYPEWL+ L  P+ +  +L R   + + T+E++RR + L  R  IK++NAS
Sbjct:   54 APVNILKDGTHPELKPREEYPEWLYTLLDPKPTLGELERKGYDNLETMEEKRRLITLSYRKAIKEKNAS 122          
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Match: A0A803LIQ4_CHEQI (Uncharacterized protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LIQ4_CHEQI)

HSP 1 Score: 58.2 bits (139), Expect = 2.660e-8
Identity = 28/68 (41.18%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   47 VVPINYLKDGQHPAIKPDEEYPEWLWHL--PQMSKAKLSRIPEEEMTVEQQRRFLQLKSRDDIKDQNA 112
            VV  N LK+G  P I+PD EYP+WLWHL   + + ++L R   E++ +E  +R+++L +R  IK+ N+
Sbjct:   69 VVGANILKEGTDPKIRPDSEYPDWLWHLLDKRAALSELQRKEAEDLPIEDLKRYVKLDNRARIKENNS 136          
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Match: A0A067CLQ6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLQ6_SAPPC)

HSP 1 Score: 57.4 bits (137), Expect = 2.760e-8
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   48 VPINYLKDGQHPAIKPDEEYPEWLWHL--PQMSKAKLSRIPEEEM-TVEQQRRFLQLKSRDDIKDQNAS 113
             P+N LKDG HP +KP EEYPEWL+ L  P+ +  +L R   E + ++E +RR ++L  R  IK++NAS
Sbjct:   38 APVNILKDGAHPELKPREEYPEWLFTLLEPKPTLGELERKGYENLESMEDKRRLIKLSYRRAIKEKNAS 106          
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Match: A0A024UUR7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUR7_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.470e-7
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0
Query:   48 VPINYLKDGQHPAIKPDEEYPEWLWHL--PQMSKAKLSRIPEEEM-TVEQQRRFLQLKSRDDIKDQNAS 113
             P+N LKDG HP +KP EEYPEWL+ L  P+ +  +L R   + + T+E +RR ++L  R  IK++N S
Sbjct:   52 APVNILKDGTHPELKPREEYPEWLFTLLDPKPTLGELERKGYDNLETMEDKRRLIKLSYRKAIKEKNNS 120          
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Match: A0A6G0XZ19_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XZ19_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.900e-7
Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0
Query:   48 VPINYLKDGQHPAIKPDEEYPEWLWHL--PQMSKAKLSRIPEEEM-TVEQQRRFLQLKSRDDIKDQNAS 113
             P+N LKDG HP +KP EEYPEWL+ L  P+ +  +L R   + + ++E +RR ++L  R  IK++N S
Sbjct:   52 APVNILKDGSHPELKPREEYPEWLFTLLEPKPTLGELERKGYDNLESLEDKRRLIKLSYRRAIKEKNTS 120          
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Match: A0A0K9Q6Y4_SPIOL (Uncharacterized protein (Fragment) n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9Q6Y4_SPIOL)

HSP 1 Score: 54.7 bits (130), Expect = 5.160e-7
Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   47 VVPINYLKDGQHPAIKPDEEYPEWLWHL----PQMSKAKLSRIPEEEMTVEQQRRFLQLKSRDDIKDQNA 112
            VV  N LKDG  P I+PD EYP+WLW L    P +S+  L R   E++  E  +R+++L +R  IK+ N+
Sbjct:   64 VVGANILKDGTDPKIRPDSEYPDWLWQLLDKRPALSE--LQRKEAEDLPFEDLKRYVKLDNRARIKENNS 131          
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Match: UPI00054004A4 (39S ribosomal protein L54, mitochondrial n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00054004A4)

HSP 1 Score: 53.1 bits (126), Expect = 1.790e-6
Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   47 VVPINYLKDGQHPAIKPDEEYPEWLWHL----PQMSKAKLSRIPEEEMTVEQQRRFLQLKSRDDIKDQNA 112
            VV  N LKDG  P ++PD EYP+WL+ L    P +S+  L R   E+++VE  +R+++L +R  IK+ N+
Sbjct:   58 VVGANILKDGTDPKVRPDSEYPDWLFQLLDKRPALSE--LQRKEAEDLSVEDLKRYVKLDNRARIKENNS 125          
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Match: A0A7R9YEM7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEM7_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.950e-6
Identity = 27/72 (37.50%), Postives = 47/72 (65.28%), Query Frame = 0
Query:   47 VVPINYLKDGQHPAIKPDEEYPEWLWHLPQMS-KAKLSRIPE--EEMTVEQQRRFLQLKSRDDIKDQNASSR 115
            VVPI +LK+ +   I  D++YPEWLW LPQ   KA   ++ E  +E++V++ +R ++L+ R  I++ N  ++
Sbjct:   44 VVPIKFLKEQEEIKIMEDDQYPEWLWELPQPGIKALTKKLHENFDELSVDELQRLVKLRRRQKIREHNLRNK 115          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22551.6004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LS05_ECTSI4.520e-2055.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCL9_9PHAE9.210e-2056.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1V9ZKD2_9STRA1.400e-846.38Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A803LIQ4_CHEQI2.660e-841.18Uncharacterized protein n=3 Tax=Chenopodium quinoa... [more]
A0A067CLQ6_SAPPC2.760e-846.38Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024UUR7_9STRA1.470e-744.93Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A6G0XZ19_9STRA2.900e-743.48Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0K9Q6Y4_SPIOL5.160e-742.86Uncharacterized protein (Fragment) n=2 Tax=Spinaci... [more]
UPI00054004A41.790e-641.4339S ribosomal protein L54, mitochondrial n=1 Tax=B... [more]
A0A7R9YEM7_9STRA1.950e-637.50Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013870Ribosomal protein L37, mitochondrialPFAMPF08561Ribosomal_L37coord: 50..76
e-value: 9.9E-9
score: 35.8
IPR013870Ribosomal protein L37, mitochondrialPANTHERPTHR28595FAMILY NOT NAMEDcoord: 15..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22551contigH-paniculata_contig22551:2180..3487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22551.6004.1mRNA_H-paniculata_contig22551.6004.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22551 1289..3537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22551.6004.1 ID=prot_H-paniculata_contig22551.6004.1|Name=mRNA_H-paniculata_contig22551.6004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MEAAPGCGNVNNIRRGMMAKAAKGKKSGKGDGGKAGAKKGDGVDLGVVPI
NYLKDGQHPAIKPDEEYPEWLWHLPQMSKAKLSRIPEEEMTVEQQRRFLQ
LKSRDDIKDQNASSRF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013870Ribosomal_L37_mit