prot_H-paniculata_contig22516.5994.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22516.5994.1
Unique Nameprot_H-paniculata_contig22516.5994.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length41
Homology
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BLAST of mRNA_H-paniculata_contig22516.5994.1 vs. uniprot
Match: D7FMF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF4_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 3.490e-7
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0 
Query:    1 MATIKAFFVSLINPHFTLKLEAKKSNQVHTVHGTGS 36
            +ATIKAFF SL+NPHF LKL+AKK  Q +TVHG+GS
Sbjct:  100 IATIKAFFQSLVNPHFALKLQAKKE-QHNTVHGSGS 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22516.5994.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMF4_ECTSI3.490e-772.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22516contigH-paniculata_contig22516:1895..3258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22516.5994.1mRNA_H-paniculata_contig22516.5994.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22516 715..3371 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22516.5994.1 ID=prot_H-paniculata_contig22516.5994.1|Name=mRNA_H-paniculata_contig22516.5994.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=41bp
MATIKAFFVSLINPHFTLKLEAKKSNQVHTVHGTGSTTAS*
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