prot_H-paniculata_contig225.5987.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig225.5987.1
Unique Nameprot_H-paniculata_contig225.5987.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length106
Homology
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BLAST of mRNA_H-paniculata_contig225.5987.1 vs. uniprot
Match: A0A6H5KAZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAZ2_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.810e-18
Identity = 48/73 (65.75%), Postives = 60/73 (82.19%), Query Frame = 0 
Query:   24 IKEFSKDETEKFSDDLKELQRLRATATQLERPSDDARESLLRYTAQLEALEAVFPVSETEN--GRRWHLTASP 94
            +KEFSK+E EK+S+DLKELQ +R+TATQ+ERPSD  RE+LLRY AQLEALE VFPVSET+   G +W  + +P
Sbjct:    1 MKEFSKEEVEKYSEDLKELQDVRSTATQIERPSDAGREALLRYAAQLEALEPVFPVSETDVRVGFKWGNSFNP 73
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BLAST of mRNA_H-paniculata_contig225.5987.1 vs. uniprot
Match: D7FMH5_ECTSI (BRO1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH5_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 7.070e-18
Identity = 47/73 (64.38%), Postives = 60/73 (82.19%), Query Frame = 0 
Query:   24 IKEFSKDETEKFSDDLKELQRLRATATQLERPSDDARESLLRYTAQLEALEAVFPVSETEN--GRRWHLTASP 94
            +KEFSK+E +K+S+DLKELQ +R+TATQ+ERPSD  RE+LLRY AQLEALE VFPVSET+   G +W  + +P
Sbjct:    1 MKEFSKEEVDKYSEDLKELQDVRSTATQIERPSDAGREALLRYAAQLEALEPVFPVSETDVRVGFKWGNSFNP 73
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig225.5987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAZ2_9PHAE2.810e-1865.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMH5_ECTSI7.070e-1864.38BRO1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availablePANTHERPTHR23030PCD6 INTERACTING PROTEIN-RELATEDcoord: 1..83
NoneNo IPR availablePANTHERPTHR23030:SF30TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 23coord: 1..83
IPR004328BRO1 domainPFAMPF03097BRO1coord: 1..82
e-value: 2.4E-18
score: 66.2
IPR004328BRO1 domainPROSITEPS51180BRO1coord: 1..105
score: 10.645
IPR038499BRO1 domain superfamilyGENE3D1.25.40.280coord: 1..101
e-value: 1.8E-15
score: 58.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig225contigH-paniculata_contig225:5173..13022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig225.5987.1mRNA_H-paniculata_contig225.5987.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig225 4777..14233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig225.5987.1 ID=prot_H-paniculata_contig225.5987.1|Name=mRNA_H-paniculata_contig225.5987.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
MLSIPFKKTDASIDLAGPLRRYLIKEFSKDETEKFSDDLKELQRLRATAT
QLERPSDDARESLLRYTAQLEALEAVFPVSETENGRRWHLTASPAIRDGR
KRDRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004328BRO1_dom
IPR038499BRO1_sf