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Homology
BLAST of mRNA_H-paniculata_contig2249.5985.1 vs. uniprot
Match: D7G282_ECTSI (3-isopropylmalate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G282_ECTSI) HSP 1 Score: 666 bits (1718), Expect = 1.210e-235 Identity = 336/387 (86.82%), Postives = 362/387 (93.54%), Query Frame = 2
Query: 2 QLSMVVEAKDSYDVMLLPGDGIGPEITTSTVNALEPLQSLFKINFKEALIGGAAIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMRSNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDTLESGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVLDVSQLWREIVIEMNENYPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGSTPVGCREMGDKVKEELSRLLASAGAVAGSAAAPATAAR 1162
+LSMV EAKDSYDVMLLPGDGIGPEIT +TVNALEPLQSLFK+NFKEALIGGAAIDAEG+PWP+STLA AK SDSILLAAIGGPKWD NPRELRPETGLLAMRS LGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGID L SGE+VGYNNMIYHEHEV+RIAKVAY+VAM+RGK+LCSVDKANVLDVSQLWR++VI+M+E+YPEVEL+HQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMG+P GPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGR AEAD+VEAAVD V+DKGYAT DI R G+T VGC+EMGDKVKEEL++L+A+ +A A AAR
Sbjct: 41 KLSMVTEAKDSYDVMLLPGDGIGPEITAATVNALEPLQSLFKLNFKEALIGGAAIDAEGSPWPDSTLALAKASDSILLAAIGGPKWDGNPRELRPETGLLAMRSQLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDELPSGERVGYNNMIYHEHEVERIAKVAYDVAMKRGKRLCSVDKANVLDVSQLWRDVVIKMSEDYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGNPDGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPAEADMVEAAVDVVMDKGYATNDIQREGTTAVGCKEMGDKVKEELAKLVAAGAGAEAAAVGEAAAAR 427
BLAST of mRNA_H-paniculata_contig2249.5985.1 vs. uniprot
Match: A0A835ZK29_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK29_9STRA) HSP 1 Score: 585 bits (1509), Expect = 3.010e-204 Identity = 290/369 (78.59%), Postives = 331/369 (89.70%), Query Frame = 2
Query: 5 LSMVVEAKDSYDVMLLPGDGIGPEITTSTVNALEPLQSLFKINFKEALIGGAAIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMRSNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDTLESGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVLDVSQLWREIVIEMNEN-YPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGSTPVGCREMGDKVKEELSRLL 1108
L M V KDSY + LLPGDGIGPEITT+TV A++P LFK+ FKEALIGGAAIDA G+P+P++T Q K SDS+LL+AIGGPKWD NPRE RPETGLLAMR LGLFANLRPAKV+++L+DAS+LKPEIV+GVDIMVVRELTGDVYFGTPKGI+T ESGE+ GYNNMIY+EHEV+RIA+VA++VA +RGK++CSVDKANVLDVSQLWR++VI + ++ YP+VEL+HQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+G+PSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGR EADL+E AVD VLD+GYATADI R G PVGC+EMG +V E L +LL
Sbjct: 38 LHMAVTKKDSYSITLLPGDGIGPEITTATVAAIQPFSKLFKMEFKEALIGGAAIDATGSPFPDATFEQIKASDSVLLSAIGGPKWDGNPREQRPETGLLAMRKGLGLFANLRPAKVVRQLLDASTLKPEIVDGVDIMVVRELTGDVYFGTPKGIETTESGERFGYNNMIYYEHEVERIARVAFDVARKRGKRVCSVDKANVLDVSQLWRDVVIRIQKDEYPDVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGNPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRPEEADLLETAVDNVLDQGYATADIMRDGCKPVGCKEMGQRVAEALEKLL 406
BLAST of mRNA_H-paniculata_contig2249.5985.1 vs. uniprot
Match: A0A6V1T6U9_HETAK (3-isopropylmalate dehydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T6U9_HETAK) HSP 1 Score: 515 bits (1327), Expect = 1.070e-176 Identity = 261/367 (71.12%), Postives = 311/367 (84.74%), Query Frame = 2
Query: 11 MVVEAKDSYDVMLLPGDGIGPEITTSTVNALEPLQSL-FKINFKEALIGGAAIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMRSNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDTLESGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVLDVSQLWREIVIEMNENYPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGSTPVGCREMGDKVKEELSRLL 1108
M VE KDSYD+ LL GDGIGPEIT +TV AL PL+ L FK+NFKEALIGGAA+DA P+P+ +L Q K SDS+LL+ IGG KWD NPRELRPETGLL MR +GLFANLRPAKV+ +L+ AS+LK E++EGVDIMVVRELTGDVYFGTPKG +T + G++V YNNMIY E E++RIAKVA++VAM+RGK + S+DKANVLDVSQLWR++VIE ++NYPEVEL+H Y+DNAAMQLIRWPKQFD +V GN+FGDI+SDEASMLVGSLGMLPSAS+GDPSGPGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL RA EA ++E AV+ VLD T DI G VGC++MG++V + ++ L+
Sbjct: 34 MAVEKKDSYDITLLTGDGIGPEITQATVAALAPLEKLGFKMNFKEALIGGAALDAVNHPFPDESLEQCKGSDSVLLSCIGGYKWDKNPRELRPETGLLRMRKEMGLFANLRPAKVIPQLMGASTLKEEVLEGVDIMVVRELTGDVYFGTPKGTETRD-GKRVAYNNMIYDEEEIRRIAKVAFDVAMKRGKNVYSIDKANVLDVSQLWRDVVIEESKNYPEVELNHMYIDNAAMQLIRWPKQFDTIVCGNLFGDIISDEASMLVGSLGMLPSASIGDPSGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLSRAEEAQMLEDAVEQVLDI-CRTVDIAGGGLPTVGCKQMGEEVAKLVAALV 398
BLAST of mRNA_H-paniculata_contig2249.5985.1 vs. uniprot
Match: A0A7S0Z0Z5_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z0Z5_9CRYP) HSP 1 Score: 505 bits (1301), Expect = 3.810e-173 Identity = 256/366 (69.95%), Postives = 300/366 (81.97%), Query Frame = 2
Query: 5 LSMVVEAKDSYDVMLLPGDGIGPEITTSTVNALEPLQSL--FKINFKEALIGGAAIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMRSNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDTLESGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVLDVSQLWREIVIEMNENYPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGSTPVGCREMGDKVKEEL 1096
+SM V+ KD Y + LPGDGIGPEI + A + + F+I +KEALIGGAA+DA P P++TL Q + SDS LLAAIGGPKWD NPRELRPETGLL MR LGLFANLRPA V+ +LVDAS+LKPE+++GVDIMVVRELTGDVYFG PKGI+ + GE+ G+NNM Y E E++RIAKVA+++AM+RGKK+CSVDKANVLDVSQLWR++VIE YPEVEL+HQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+GDPSGPGV+EPCHGSAPDIAG DKANPLA ILSAAMM RYDL R AD +EAAV+ LD G TAD+ A +GC++MG++V + +
Sbjct: 17 VSMAVKKKDKYTITTLPGDGIGPEIIAGAITACDAVAKKQGFEIEWKEALIGGAALDAHNDPCPDATLDQMRASDSCLLAAIGGPKWDKNPRELRPETGLLKMRKELGLFANLRPATVLDQLVDASTLKPEVIKGVDIMVVRELTGDVYFGAPKGIEERD-GERFGFNNMCYKESEIRRIAKVAFDLAMKRGKKVCSVDKANVLDVSQLWRDVVIEEAAAYPEVELTHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVYEPCHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPEAADALEAAVNKALDDGLRTADL--ATENTIGCKQMGEEVAKRV 379
BLAST of mRNA_H-paniculata_contig2249.5985.1 vs. uniprot
Match: A0A7S0N7T0_9CRYP (3-isopropylmalate dehydrogenase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N7T0_9CRYP) HSP 1 Score: 504 bits (1297), Expect = 1.590e-172 Identity = 261/364 (71.70%), Postives = 299/364 (82.14%), Query Frame = 2
Query: 11 MVVEAKDSYDVMLLPGDGIGPEITTSTVNALEPLQSL--FKINFKEALIGGAAIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMRSNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDTLESGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVLDVSQLWREIVIEMNENYPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGSTPVGCREMGDKVKEEL 1096
M V KDSYDV LLPGDGIGPEI + V A + + + F INFKEALIGGAA+DA P P+ TL Q K SDS+LLAAIGGPKWD NPRELRPETGLL MR LGLFANLRPA V+ +L+DAS+LKPE+V GVDIMVVRELTGDVYFG PKGI T + GE+ G+NNM Y E EV+RIAKVA+++A +RG K+CSVDKANVLDVSQLWR++VIE + YP+VELSH YVDNAAMQLIR PKQFDV+VTGNIFGDILSDEASMLVGSLGMLPSAS+GD SGPGVFEPCHGSAPDIAGQDKANPLA ILSAAMM RYDL R A+ +E AV+ VLD G TAD+ R + +GCR+MG++V + +
Sbjct: 20 MAVSRKDSYDVTLLPGDGIGPEIIKAAVVACKAVAAKQGFTINFKEALIGGAALDAHNDPLPDVTLKQMKASDSVLLAAIGGPKWDKNPRELRPETGLLRMRKALGLFANLRPATVLPQLIDASTLKPEVVAGVDIMVVRELTGDVYFGEPKGI-TTKDGERFGFNNMCYKESEVRRIAKVAFDIASKRGNKVCSVDKANVLDVSQLWRDVVIEEHAKYPKVELSHMYVDNAAMQLIRNPKQFDVIVTGNIFGDILSDEASMLVGSLGMLPSASVGDRSGPGVFEPCHGSAPDIAGQDKANPLATILSAAMMFRYDLDRPEAAEALERAVNKVLDDGLRTADLARENT--IGCRQMGEEVAKRV 380
BLAST of mRNA_H-paniculata_contig2249.5985.1 vs. uniprot
Match: A0A7S2RSG3_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSG3_9STRA) HSP 1 Score: 505 bits (1300), Expect = 2.390e-172 Identity = 260/367 (70.84%), Postives = 295/367 (80.38%), Query Frame = 2
Query: 26 KDSYDVMLLPGDGIGPEITTSTVNALEPLQSL---FKINFKEALIGGAAIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMRSNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDTLESGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVLDVSQLWREIVIEMNENYPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGS--TPVGCREMGDKVKEELSRLLA 1111
K+ + LLPGDGIGPEIT +TV LE L +F EALIGGAA+DA P+PE TL + SDS+LLA IGGPKWD NPR+ RPETGLLAMR N+GLFANLRPAKV+ +LVDAS+LK EIVEGVDIMVVRELTGDVYFG PKGIDTLE GE+VGYNNMIY E E+ RIA+VAY+V+++R K+LCS+DKANVLDVSQLWR+ V + +P+VELSH YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G+PS PGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL R EAD++E AV+ VLD TADI + G T VGC MGD V + L A
Sbjct: 55 KEVSKITLLPGDGIGPEITVATVKVLETLAECKGDLSFDFNEALIGGAALDAVDDPFPEETLNSCQSSDSVLLACIGGPKWDGNPRDKRPETGLLAMRKNMGLFANLRPAKVLPQLVDASTLKREIVEGVDIMVVRELTGDVYFGEPKGIDTLEDGERVGYNNMIYKESEIDRIARVAYDVSLKRRKQLCSIDKANVLDVSQLWRDKVTSIGAEFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASLGEPSSPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLARPDEADILEKAVEKVLDSDVRTADIYQEGEGQTMVGCSAMGDAVCSAVKELFA 421
BLAST of mRNA_H-paniculata_contig2249.5985.1 vs. uniprot
Match: A0A7S2V595_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V595_9STRA) HSP 1 Score: 496 bits (1278), Expect = 2.800e-169 Identity = 251/373 (67.29%), Postives = 304/373 (81.50%), Query Frame = 2
Query: 2 QLSMVVEAKDSYDVMLLPGDGIGPEITTSTVNALEPLQSL-FKINFKEALIGGAAIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMRSNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDTLESGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVLDVSQLWREIVIEMNENYPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGSTPVGCREMGDKVKEELSRLLASA 1117
Q++M V K SYDV LL GDGIGPEIT + + A++PL+ + F +NFK+ALIGG AID P+P+ +L Q + SDS+LLA IGG KWD NPR LRPETGLL MR + LFANLRPAKV+ +L+ AS+LKPE++EGVDIMVVRELTGDVYFG PKG T E G++VGYNNMIY E E+ RIAKVA++VAM+RGKK+ S+DKANVLDVSQLWR++V E ++NYPEV+L H VDNAAMQLIRWPKQFD +V GN+FGDILSDEASMLVGSLGMLPSAS+G+P PGVFEPCHGSAPDIAG+DKANPLAMILSAAMMLRYDL R AD++EAAV+ VLD Y T DI G +GC++MG++V + + + + +A
Sbjct: 22 QITMAVGKKASYDVTLLKGDGIGPEITDAAIVAMKPLEQMGFTMNFKDALIGGIAIDEVNDPFPDESLKQCQESDSVLLACIGGYKWDKNPRHLRPETGLLKMRKEMDLFANLRPAKVLPQLLGASTLKPEVLEGVDIMVVRELTGDVYFGQPKGTMTDEDGQRVGYNNMIYSEGEITRIAKVAFDVAMKRGKKVHSIDKANVLDVSQLWRDVVTEESQNYPEVDLQHMLVDNAAMQLIRWPKQFDTVVCGNLFGDILSDEASMLVGSLGMLPSASIGNPENPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLRYDLARPEAADILEAAVEEVLDT-YRTGDIAADGFELIGCKKMGEEVAKLVEKRVKAA 393
BLAST of mRNA_H-paniculata_contig2249.5985.1 vs. uniprot
Match: A0A7S0F2Y7_9CRYP (3-isopropylmalate dehydrogenase n=3 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0F2Y7_9CRYP) HSP 1 Score: 496 bits (1278), Expect = 3.110e-169 Identity = 258/362 (71.27%), Postives = 296/362 (81.77%), Query Frame = 2
Query: 5 LSMVVEAKDSYDVMLLPGDGIGPEITTSTVNALEPLQSL--FKINFKEALIGGAAIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMRSNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDTLESGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVLDVSQLWREIVIEMNENYPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGSTPVGCREMGDKV 1084
LSM V+ KDSY V LPGDGIGPEI +TV + + + FK+ FKEALIGGAA+DA P+P+ TL Q K SDS+LLAAIGGPKWD NPR+ RPETGLL MR +LGLFANLRPA V+ +L DAS+LKPE+V GVDIMVVRELTGDVYFG PKGI T + GE+ GYNNM Y E EV+RIAKVA+++A +RGK++CSVDKANVLDVSQLWR++VIE +++YP+VELSH YVDNAAMQLIR PKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSAS+GDPSGPGVFEP HGSAPDIAG DKANPLA ILSAAMM RYDL R A +E AV+ VLD G T D+ VGC++MGD+V
Sbjct: 47 LSMAVKKKDSYFVTTLPGDGIGPEIMAATVKVCQAVAAKQGFKMEFKEALIGGAALDACNDPFPDETLKQMKSSDSVLLAAIGGPKWDANPRDKRPETGLLKMRKSLGLFANLRPATVLPQLADASTLKPEVVSGVDIMVVRELTGDVYFGEPKGI-TTKDGERFGYNNMCYKESEVRRIAKVAFDIARKRGKRVCSVDKANVLDVSQLWRDVVIETHKDYPDVELSHMYVDNAAMQLIRNPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASVGDPSGPGVFEPIHGSAPDIAGTDKANPLATILSAAMMFRYDLDRPDAAQAIEDAVNKVLDDGVRTGDL----GGKVGCKQMGDEV 403
BLAST of mRNA_H-paniculata_contig2249.5985.1 vs. uniprot
Match: A0A7S1G2F4_9STRA (3-isopropylmalate dehydrogenase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G2F4_9STRA) HSP 1 Score: 496 bits (1278), Expect = 3.340e-169 Identity = 265/364 (72.80%), Postives = 298/364 (81.87%), Query Frame = 2
Query: 17 VEAKDSYDVMLLPGDGIGPEITTSTVNALEPLQSL--FKINFKEALIGGAAIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMRSNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDTLE-SGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVLDVSQLWREIVIE-MNENYPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGS--TPVGCREMGDKVKE 1090
V +SY V +L GDGIGPEI+T+T L L F++ K ALIGG AIDA +P+P+ +LAQ + SDS+LLA IGGPKWD NPRELRPE+GLL MR +GLFANLRPAKVM +LVDAS+LK EIVEGVD+MVVRELTGDVYFG PKGIDT +GE+VGYNNMIY E EV+RIAKVA +VAM+RGKKLCSVDKANVLDVSQLWR++ I+ M ++YPEV+LSH YVDNAAMQLIRWPKQFD +VTGNIFGDILSDEASMLVGSLGMLPSAS+G GPGVFEP HGSAPDIAGQD ANPLAMILSAAMMLRYDL R EAD++E AV+AVLDKG TADI G VGC EMGD V E
Sbjct: 42 VPKSESYSVTILEGDGIGPEISTATKKVLAALTKRCGFELELKPALIGGCAIDAANSPFPDESLAQCRSSDSVLLACIGGPKWDGNPRELRPESGLLKMRKEMGLFANLRPAKVMSQLVDASTLKREIVEGVDVMVVRELTGDVYFGAPKGIDTDPVTGERVGYNNMIYSESEVRRIAKVAGDVAMKRGKKLCSVDKANVLDVSQLWRDVTIDVMEKDYPEVDLSHMYVDNAAMQLIRWPKQFDTIVTGNIFGDILSDEASMLVGSLGMLPSASIGL-EGPGVFEPIHGSAPDIAGQDVANPLAMILSAAMMLRYDLARPEEADILERAVEAVLDKGIRTADIKFDGDGCRLVGCVEMGDTVAE 404
BLAST of mRNA_H-paniculata_contig2249.5985.1 vs. uniprot
Match: B7G1X8_PHATC (3-isopropylmalate dehydrogenase n=2 Tax=Naviculales TaxID=38748 RepID=B7G1X8_PHATC) HSP 1 Score: 494 bits (1273), Expect = 2.440e-168 Identity = 260/368 (70.65%), Postives = 304/368 (82.61%), Query Frame = 2
Query: 17 VEAKDSYDVMLLPGDGIGPEITTSTVNALEPL--QSLFKINFKEALIGGAAIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMRSNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPKGIDTLESGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVLDVSQLWREIVIEM-NENYPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIFGDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANPLAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGS--TPVGCREMGDKVKEELSRL 1105
V KDSYD+ LLPGDGIGPEIT ST L L + F +N K ALIGGAAIDA P+P+ +L Q + SDS+LLA IGG KWD NPRELRPE+GLL MR +GLFANLRPAKV+ +L+DAS+LK E+VEGVD+MVVRELTGDVYFGTPKGI+T+ +GE+VGYNNMIY E E+ RIA+VA +VA +RGKKLCSVDKANVLDVSQLWRE+V ++ +++P+VELSH YVDNAAMQLIRWPKQFD +V GNIFGDILSDEASMLVGSLGMLPSAS+G+ SGPGVFEPCHGSAPDIAG+DKANPLAMILSAAMML+YDL R EA L+E AV+AVLD+G T DI + G VGC EMG+ V + ++ L
Sbjct: 41 VSKKDSYDITLLPGDGIGPEITESTKKVLTALCEKCGFDMNLKVALIGGAAIDAVNDPFPQESLEQCQASDSVLLACIGGYKWDSNPRELRPESGLLKMRKEMGLFANLRPAKVLPQLIDASTLKREVVEGVDVMVVRELTGDVYFGTPKGIETI-NGERVGYNNMIYSESEIDRIARVAGDVASKRGKKLCSVDKANVLDVSQLWREVVTDVITKDFPDVELSHMYVDNAAMQLIRWPKQFDTIVCGNIFGDILSDEASMLVGSLGMLPSASIGE-SGPGVFEPCHGSAPDIAGEDKANPLAMILSAAMMLKYDLDRPDEALLLENAVEAVLDQGLRTPDIKQEGDGCKLVGCSEMGEAVAKIVTEL 406
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 664.1 |
| Seed ortholog evalue | 4e-188 |
| Seed eggNOG ortholog | 2880.D7G282 |
| KEGG rclass | RC00084,RC00114,RC00417,RC03036 |
| KEGG ko | ko:K00052,ko:K21360,ko:K22382 |
| KEGG Reaction | R00994,R04426,R08621,R08625,R08629,R08636,R08642,R08646,R10052 |
| KEGG Pathway | ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 |
| KEGG Module | M00432,M00535 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009651,GO:0009941,GO:0009987,GO:0016143,GO:0016144,GO:0019748,GO:0019757,GO:0019758,GO:0019760,GO:0019761,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0050896,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 |
| EggNOG free text desc. | 3-isopropylmalate dehydrogenase activity |
| EggNOG OGs | COG0473@1,KOG0786@2759 |
| Ec32 ortholog description | 3-isopropylmalate dehydrogenase |
| Ec32 ortholog | Ec-16_002120.1 |
| EC | 1.1.1.85 |
| COG Functional cat. | CE |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01601,ko00000,ko00001,ko00002,ko01000,ko04121 |
| Exons | 8 |
| Model size | 1836 |
| Cds size | 1155 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2249.5985.1 >prot_H-paniculata_contig2249.5985.1 ID=prot_H-paniculata_contig2249.5985.1|Name=mRNA_H-paniculata_contig2249.5985.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=385bp
MVVEAKDSYDVMLLPGDGIGPEITTSTVNALEPLQSLFKINFKEALIGGA
AIDAEGTPWPESTLAQAKVSDSILLAAIGGPKWDDNPRELRPETGLLAMR
SNLGLFANLRPAKVMKELVDASSLKPEIVEGVDIMVVRELTGDVYFGTPK
GIDTLESGEKVGYNNMIYHEHEVKRIAKVAYEVAMRRGKKLCSVDKANVL
DVSQLWREIVIEMNENYPEVELSHQYVDNAAMQLIRWPKQFDVMVTGNIF
GDILSDEASMLVGSLGMLPSASMGDPSGPGVFEPCHGSAPDIAGQDKANP
LAMILSAAMMLRYDLGRAAEADLVEAAVDAVLDKGYATADITRAGSTPVG
CREMGDKVKEELSRLLASAGAVAGSAAAPATAAR* back to topmRNA from alignment at H-paniculata_contig2249:2..14756- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2249.5985.1 ID=mRNA_H-paniculata_contig2249.5985.1|Name=mRNA_H-paniculata_contig2249.5985.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14755bp|location=Sequence derived from alignment at H-paniculata_contig2249:2..14756- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCAGCTTTCAATGGTTGTGGAGGCAAAGGATAGCTATGACGTCATGCTGC
TGCCGGGAGACGGAATCGGGCCCGAAATTACAACGTCTACGGTGAACGCG
CTGGAACCACTTCAATCGCTCTTCAAGATCAACTTCAAGGAGGTGAGTTT
TAACTTTTTACTGTACTACTACATGCTGGGAATTTTTGCGTGATGACAAA
ACAACATGCCAGTTCAAGTCAGCCCCAACAGGTTAGAAAAAAAAAATGTG
ACATGGCTCGAAAGTCTCGGTTAGGTGTCCTTTCGAGAGTTTTTTGTAGT
AACGACGAATAATGATTACCTAAATATGTGAATCGTTTGGTGTATTCCGG
TACAGCGCTTATTTTTTGTTATATGGAGATGAAGAAGTAATTCCCATATA
CGGAGATCAACAAGTATTCCCATGCATGGGGGCAAACGCGAGCTAAAGAG
AGAGTGCAAATAAGAAAGCAAAACGCGATGAATGCCGCCGTCCGAAAATA
CACGTGAACAAGTTTTTTTTGCTTGTTTTTCTTGTCTTTTTGTAAATTAA
TGTAAATAGATGAACGGTGTATGTAACACAATTAAAATAGTTCAATTGAT
GATCGGCTTGCGTTTGTCGTTCTAGCAGTCACCACAATATTGTTTCTGGT
ATGGTTTTTTACCCTGGTGTTATTACAGCGGGGTTGAAACTTTAATTTAT
ATATTTATTTCCCCCCCGACAGATCCGTGAAGCATACCAATACTTGGAGT
AGTCGTGATAAAATTCAAAAGTGTTCGTCTAAGACTACTGCTTACAGCAG
GATTTTTTTTTTTTTGCTCACTCCCTTCCTGAAAAGCAATTTTTGAACAA
GTTATGGGAAAGTATTTTCGAGAGAAATTGACCCAGATTCTCTTCAGGCT
CCCTAAAAGTGTGCTCTGAATAATGAACAGTGAAACGAGCATTCTGAAAC
TCAGGTGAATATATATACATATATATATATATATTATGTCGCAAATGCCC
GAAACATTTATTGTCATCTCGGGGGTAATGGGTGAGTTGTACTTAACCCC
CCCCCCCCCTCCTTAACCCCGCTGGGGCGCGGAACACGTTTCACGATAGC
GTTTGTTTTTTTTGCTTTAAAACAAACGAAAGCTTGACTATATACAAAAC
TTAGGAGCGGTTCACAACAATTGCGTTAAGTCAGTTTACTGTTTTTGCTT
GCTGATAAAAGTTGCGCTCACTCATTTAATGGACCACAGGCGCTAATTGG
GGGTGCCGCTATCGACGCGGAGGGGACGCCCTGGCCGGAGTCTACTCTGG
CTCAAGCAAAGGTGAGGGGCAGACAAGGAAGGAGCCAATTTCGCCGGCCC
ACGTGTCTCGCTCCATTTGTTAGTTGTAGTAACCTCGCTATCTCCTTCGG
GGCGCAAGATGAAGCGAATCATGATCGTTATTGTTTTTTTGGTGGTGGTG
GGAGGGGGTAGATACCGATGAATCAATGCTCCACTCGGACACGACTAAAA
ATGACTTCCTCGCCTGTACAATTGTCTTTAGTATTTCTTTTCCAGAATAT
TTAACATGTTTATTTTTTGTTATTTTTGCATGAAAGATGTCCCCAAGAGC
AGGTATGCAGAAAACAGATTTTAGTAAAATATTGTCGATTCCGTTCCTTG
AGATTACATGTTTAGCTTGATCAACTATTTATTAGTTGGTTCGACTATGG
GAAATTGGTCGACTACGTACGCCTATCAGTCGTTGGATATGCGAAGCATT
TTTCAAACGCGATTGACTGTCTCGAGAACGGAGACATATGCAGGGTTAAA
AATAACCCTGTCATCAATACATGGATCTCCGCAAGATCTCTCCAACAGCA
TACCGTTCGTTCGTTGTCAGTAGCGCCATAGTTCTCGATATATCAAATGC
GTTTGATAAGCGTTCGTGCTCCGGTGCGAAACAAAACCTGGCAAGAGTAC
TCTCCGGAATGGGGGTATATGTCCTGCAAACCCCGTTGGATGTGATGTGT
AGTGGCTGGGCGTGCGAGGTAGTTTTAGCGTGATATAGCCACATCGGTCG
TCTCTTGAACGAAGAGAGGGGTAACAGGCGTACTTCTCGTTTTGAAAAAA
ATTGGATAACCTCTTCTTTTTTTTTTATCCTACTTTTCCACGGTTAGGAC
CAATCATATCGTTCACAGATCGTACCCATCATTTTGCACCGATAGACCGT
AGCATCGGTATGATCCGTACATGGTTTCCACCTGTAGTTGGTACCCCACA
GATCCGTTGCACACGTTTTTTTCACGTCTGATCTGTACAAGCCTGCAAAT
ACCTATATTAATCAGTCGAATGTGGAGAGCACGTTCCTGACGTTCCTGGG
GTTCCTTAACCTCGGCCCACTGCGCAACGATCAATGTCATTTTGTCCCTT
TCTCGGAACTGCTTTGTAGCTGATCTGACCCCGGAGGGGCCAGTCGATCT
ACCATAGAACAAAACCCAAGTGTTTCCTCCGCACTACATCCCAAAAGTTG
GAACTGACGTGAATAGAGCAGGCGGTGTCCCCTCGAGAGCCAGTCTCTCG
CGGAAGTATTGTGTTATCATCTGGCATTCGCCGGTAGGTTTCCTTTGAGA
ACAAGCGCGCGAGCACATGCGTACAGCTGCTGTGTACTTCAGTTTTAGCG
AAGGAGCCCATGGAGGCGGCTACAAAAGCTGCCTGTCTGGCCTTCACATT
ATACGACACGAGAGCTGCACGGACCAGTCTCAAGGAGGGACACAACACGC
CCTCGCTGTACTCGTTGCGGGCTCCCGCTTTGCCGCCGCTACTTGTGCAA
CACCACAACTAACATTACAACATTATTGCTCTTCAGCGGGACCCCGACTC
ATCGATATCACCATGTTAACGGCTTAGGGACCCGTGCATAATTCCAGAGA
GTTGGTGATATTGCAGCTAATACTCCCAGCGACTGGCAGGAAGTTCCGTA
AAGGTGGCAGCATACGCGACTCAATCGCGTGAAAGCCGCTGGTAAGATCG
TTGTGGTAGTAGGGTTGCATGCGACCTCGTGCCAGAGGTAGCGATTGGCG
TGCAAAGTATTGGAGATTTCGAGTTGTGTTCATTCAGGATATGGAACAGC
CAATCATCATGAATTAAAACCTATTTTCAGAGTCCTCTATGGAGTCCCTG
CTGTTTTACCCGCAAGCTTGCCCAACAGACAGCAATGACATGCTCTTGGC
ATCATGATCAATCCGCTCAGACTTGATAAACCGTCGTGTACATTACATGA
TGGGTCGCCGTTCAAATCTAGGGTAGAGCATACCACGGGTCAACTGACTT
GCTGTTTTATAGATGGTGCATGAAGCCTGCAGAAACACTGTCGTTTCCTT
GTCACCGGTACAAGTATTCACCGGAAAACATTACACCGTGACGTTACCCA
GTACCCCCCAAGAAGAAACTATGGAAGTCCGACGGCTAGAGCAGATGGTT
TATCACCTCTGGATCGCGCGCAGACAAATGTGTGGTTTCTCATTGAGCAA
TATATGTCGGTACTTACCTCTGCCTTTCAAACAGGGAAAATCATAATCAC
GGTGTAGTGGTGTCTGTACATGGCGCAAAATCGTAACTGTCGGAGCAACT
GTTCCCACAGCTAGTGCATAGCCTTACGCACAGTGGTCGGCCCAGCGCAA
CTTCGGGATGAGATTTACCCCCCGTTATCTTTTGAACGGGGGAGCGCGTG
CTGGTTTTGGCCAGCCTGGGGTAGTGTGTAATGGTGCTGGAATAAAGAGT
CATCGATACTTGAAATAGATTCCTGAGCTTGCCCCAACAACTGATTTGAA
AGCACATATTACCGGCCTACAGTGTATGTGCGTAAGTGCCTAGCGCGCGA
CGACTTGCCGCAGAGTAGCTATGTTGCGCATGATACGTGCGATATGCGCT
ACTGCTTGACACCTTTGATCCCATTGCCAGTGAGTGTCTGCCACCACATT
GGGCACAAAAGAGGGGAAGTACAAAGCATATTCAATAGAGGTGCTCTTGC
GAGGTACCTGGTATTTTACGGGCTCAAGTTCACAGTAGCTTTTCTTCGAA
AACGGTACATGTACAAGTAATAATCAACGACGAGCATGTCCCAACAAGTT
ACGATAGACAACGCCGTGGGCGTATCTCGCATCGCCTTGGATTCATTCGC
CAGCACAAAAGTTCGCGGTATGCGGAAGTGTACCCTATCCCAGGCGGAAA
CTAAATGAACAGGTCAGGTGTATGCTGATGCCGATTTTCCGTGTTTGTCG
GAGTAATTTCCCCGCAAACATGATATTCTCTGCTCCACAGCAGTTCATCC
TGTACGGGTAAAAGGTCAATCAATCTGCGATCTGCCGACAGATCTCCGCA
TGAAATTGGCGGATATATCCATTTCACCCTTGTGCCCAGAGGCATCACCA
GACCCGCCTAGGCGATGGTGCTCCCGCATTTAAGCCCTAACAACTTGTTA
TTAGGCAGAACGATCATGGGCGTTTTTCGAACAACTTTGGACTGGGATAT
CATCGTAGAATTACGATGCTCGCCATCACCGGATATTCGTGGATCGGGCG
GCTGACATGCAGCTGTCACCCGTACATTTGTTGCTCTATAGTGCAGTAGT
GACTGGGAGAGTACTGTACACGTCCGCACAGTCACTGCGAATAGTGGCAA
AGTGCACCAACAATGGAACAGCATGGTACCTGCAAAGAAATGATCATTCT
CCCGCAGGACACGAATTGGCGACCCTGGGCACGAAAAACATCATGTCGAG
CCAGGCGTCACATGCACTGTTGAACCACTGGTCATGCTTTAGAGTAAAAT
TATACACCAAGGTGTTCATAGTCATGGCGATGGTCGTCATTTTAGAACAT
CTATTAAATTTTATACTCGGGTAGCTTCGAAAGATGAATCTTGATGGGTT
TTTTAGTTTTACACTCCTTGCGAGCGCAGCAAGCCGTTTTCTGTGCCGGG
TCGAGGATTAATCGGTCATTTTTATGTCATGAGGTAAGTTATTTTCTTCA
TTTTTGTATTATTTGATGCTTCAATTTTTGTTATGCGTTTTTTGGTAGCG
TTACAAAACACTTGTGCGCCGGCGTTGTAGTAAGTAGGGGTTGATGGAAC
CTCCCTGTACCCCCGCCCGCCCGCCGGTCGAGAACATGGTAACTTTTGTC
TCCTCGCGTTTTCGTTTTTCTTCTTTTTTCTCCATACTGCTGCTTCACTA
GAGACAAGCATAACATAATGAATATAAAATGGGGAAAAAGGTGAAAAAAA
AACCCAAGAAAATATTATCTTCCGACTCGCGCAGCGTTGGAAGCTATCAT
ATGATAAAATTCGTAGTGTCATCAGCCTTTGGGACACTCGGTATTTTGAC
TCATCGTGCGCGTTGTAGTTAACCTGTTCTGTTGTATGTATGTATGTATG
TATGTATGTATGTATGTATTATGTATGTGTATATATATAGTCGAAGAAGC
ATTGTAAATGACACTTTTTTTCGCTATTTAAAAAAAAACAAAAACATAAC
ATGACCACCGTCCCAGGTGACGTCTGATAAAACCAGGATCGCCAGTTAAA
CCTTCAAGAATTTCTTTGGTTGCCCGTGTATTTTGTACTCCGTCAGGTCT
CCGACTCTATCCTCTTGGCCGCAATCGGCGGCCCTAAGTGGGACGACAAC
CCAAGGGAGCTTCGCCCAGAAACGGGGCTGCTGGCCATGCGCTCCAACCT
CGGCCTTTTCGCGAATCTCCGTCCGGCGAAGGTAAAAGAACACGAAACAC
ATAAAGCACTCAACATGCTCGTATCTTTGTTTTCGCCCCCTTGAGGCTTC
AGCGCCATAACTCTGCGAAAAAAAACGGTCCTATTGATGGGGTGTTTTTT
GCGAGGTAACCAACGGGACTTGAACAAATACCGCTTTAGTGTGAAGAAAA
AAAATGTCAATGCAACTTTTTGCGCAGCAATTAGGGGTGGTCATTGCCCG
TACATGGTGTTTCCGTCAGCGCGGCGGGTGTGTGTATACACGGTAAGGTG
GCGTGCAGGCTTTGGGGCCCTACGGGAAATCCCTGCGAAAGCCGCCCGAT
TTGATCATGGGGCTATACATGGGGGAAATTCTGTGCTGGCGACACAGGTG
TGTGTCAGCGACATGAGTTTTGATGCTGTGGAAGCAGCGGAAAAGGTTTT
TACCTCAGCCTTCCGGGGGTTAAAAAAAGAAAAAAAAGAAAAGGTTTTGA
TGCTCGCTGTCTCGTTTCACAGCGCAAGACAGGTCACGCCTCCTCGAACA
AAGCATAGCACTTCGCACCTCTTCCAAATACACCCCATGCTGATATGTTA
CTCCCACTGGATGTCGACGTGGACGTTTGTTACGGTGATTAACAACAGCT
GTGCAGCTTCTCTTGGAAATAGTTGCAGGTTTTCGTGTTCCTATGAATCT
ATGCTTCGTTGTTATCCGGTGTGTGTGTGTTTTTTTTGTATAGATGAGAT
GGCGTTTCGAAATTACACCCAGCTCCAAAGGGGTTAAAGTGAAGACAACT
TGATGCTCTTAACCCATTAAATTCAGTTTAAGTTGGTTTGAACAGGGGAA
GGTTGAGGTATAGCAGGGTAGGTAAAACATGGTTGACACGTTAGGCAACA
TAGGAATTAGTGATTCGCCATCGGAAACAACTCTGAGGGGAACAAATCTC
CTTCCTCCCGAGGATTACATGTGTGGTGAATGGTCTAAGAACTAAGGTGT
CCCCTTTTCTCTCGAAATACGCCACTTTCGTCCCCCCCCCCCCAAAAAAA
AAAACAAAAAAAAAAAACAAAAAAACCTCCCTCCCCCCAAAAAATATGCG
CCATTTCGGGTCCAAGTCGGGTGTTTATTTATTTGGCCATAACTTTCCAT
TAAATTATTTGTATGCGCAAAAGTAGGTATCTCCGGAGAGCCTGAAGTCT
GGCGCTTCCAACCATACAAGAATAACTCAAATCCGATGTGTTTACGAAAA
TTACAAGGGCGAAAGCTGCCATCAGCCCTCACATAACGGTGTTTCCATCC
GAGCCCTGAACGTTTTCGTGCTGCAGCGCGCGCGGCTACGAGAGTGATGA
GAGAGGCTCCCTTTGAAGCTGACGCGTCGATTCAAATAGGGGTTTGGGGG
AGATTCGCCCTGCAGAGGCTATTCTGTGTGCGGTTGTACAAGGCAGTCCA
CAACGTTTGTTTTCCTGCTTTTTCGGCGCCAAGTCATGTTGAAAAAAAAT
ACATGCACAAAAACACTAAGCACCGAAACTTGTATTGGGAGATTTGGTAG
AGATGGAGACACGCAAGCGGTCCGCCCGCAGGCGGTCGAGGGACGGAATC
AGCACCCGAGGTCATCCTCATCACACTCGAGGTTTGAAGACTCCTTTGGT
GGTGCAGAGCCATCGTCGACTGCAGTGAAGTCTGCAGCAAGTACAGCGGT
CGCAGGAGACAAGAGGTCAGGCAGAAGACAAAAGCGCTGCAGCCAGCGAG
AGGGACCCAGCGAACGAAAGCGAAGCAGGGAGCGGTAGTAGGTTTGACGG
CAACAGGGGATCAGGATGGACTGATGAAAAGTCATCGTCGAGCGGTGGTA
GCCCCTCATCTGGCGACGCGGGGCCGACACCACCAGCACACAACAGCGGT
AGCAAAAGAGCGTTGAAATGCACATTTTGTACCGCTTTTTGTCATACTCC
AGTCAAAGTCAGTTTTTATCTGTAATATCCGCCAATTCAACTTATATTTC
ATCATATATATAGACGCGGGGCCGACACCACCAGCACACAACAGCGGTAG
CAAAAGAGCGTTGAAATGCACATTTTGTACCGCTTTTTGTCATACTCCAG
TCAAGGTCAGTTTTTATCTGTAATATCCGCCAATTCAACTTATATTTTAT
CATATATATATATTTATATTTCAGCATTTTCCTATTGGTCGTGTTGAGAC
ATTCAAAGGGAAATCCGGTTTCTTGGCAATATCTGGCCTATTACGAACCA
AAAAAAAAAAAAACGCTCTTAAGAGAAAATAAAGTTTTCCCGAAAATCAC
CATTTTCTATAGAAAAACCTGTATTTTTGGCCATATCTCGTTGGCATTTG
ACTTTGTGCTTAGACACCCCAAAGAAGAAAATGTGCGCTAGGCACGTACG
GTGTTGATAAATAACAACGCATTGAAAAGTCCATCTTATGGAGATATGTC
GAGGGACACCATAATGTGCCCTACCCTAGTGGTACCCCCTCCCTCCTTCC
CGTTTTTCCTTTTTTCCATTTGGAATCGTTTTGCGTCCCTACGTTCTCCT
TCTTGTGTTCGTCCAGGTGATGAAGGAGCTGGTTGATGCCTCTTCGCTGA
AACCTGAGATTGTGGAGGGCGTGGACATCATGGTGGTACGGGAGCTCACG
GGCGATGTTTACTTCGGAACTCCAAAGGTGATGAGAGGAGGGATGTACGA
AGTGCTGTTGTTGGTGAATAGAGAACTAACTATTATGTTGCTTGTGCTAG
TGGCGATCTGTAGCGCTTTCGGGATTTTTTTTTTTTTTTGTACAAGTGAT
ATATAAGGAAACTGCACGAGGGTCGTGAAGTCGATCGGATGTAGATATAG
ATTGTATGGGTCTCGAGGGCGATTCTTTTTATTTTTATGTTTTTTGTGTT
GCTCTTTCTATTGCTGAGGACTGCAATCTCCGACTGTTGGTTTGTTCATG
TCGATCATTTTTTTTTTTTTTTTTCTTGTCGTTCTTGATCTCTCTCTCTC
TCTCTTGCTTGCTTTTGCTCTGTACGTTGATTACTCGGTTACTATTTTCC
CACATGAGGTACCTCTTTCTGCCCGTCTGGTACATTTTCTCTCATTGAGT
GTTTTTCTTGTGCTCTGTGCGAATTGTTGGTTTTACTCGGTGGAGGCGTG
ATTCACACGCTGTGCATGCGAAACGCTTGTTTTTTCCCCCTTGAGGCTGT
AAACGGCAGTTTTACGTACCGACTTTGGCATGTTTTCGGCGACGGATGCT
GTTCTCTCCGCGTAGTTGCAGAGTGCCCCTTCTCCCGAGTGTACATCACT
CGTCTGCTTTTTGCCCGTCTGTTGACCAATTTGGTGTTGCCTCGTTTTTT
TTTGTTTTTTTTCGATTGTTGTTGTTATTGCTCGCTTTTTGCCAGGGGAT
CGACACGCTGGAGTCAGGGGAGAAAGTGGGGTACAACAACATGATTTACC
ACGAGCACGAGGTGAAGAGTGGGGCTTTACTTTATGGTGTCTACTGCTAT
GGCGTTACTAATTGTCGTCATGGACCCTAGATAACGAGAGCCTAATTTTC
ATTTTTTTTTGCCTTTTTTTGTTTTTTTCTCATGAAATTATGTTTAAAGC
GTACTTTTGTCACCACTTACACGCACAGCACAACGGATAAATGTAACCTG
TATATTGGGTAATAGCGCAAGTTGAGGTAGATGATGTGTTGCGATGTTAT
CTGTCTAAGAAGGGCGAAACAAATGAAGTTGGACGAGACAGTTACAGTCC
AAAATGGGCACCCCGAAATACCAGTGCTACGGTTTTCCGAATCACAAATG
ATTGAGTACGAATCCGATCTTGGCAAGAGAGGCAAACATGTACTTCTGGT
TCGTCCCCTTTTTGGAAATGACACGTTTTTGATTCGTCGGCATTAGCCTT
GAGCTGAAGAGAACAATGGTTGATTCGTTCAGGTGGATCTTGAGACTTTT
CGAAGATAATCGGAATTCGCGTTCCCCGATATATCGCCCTCGGATATATC
TCCGAATACACCTGATATATCGGATCTGTCGCCACACGATAGATGATCTA
TCGCGATATAGTCGAATGTATCGTCGCCGATACGCAACCCCTTTCATCTC
AGTATACTTTTTACTAGTACGTTGCAATACGACAGGGATATATGTTATGA
TAGCACATGAACGCGAACGTATTCCGATGAAGCAAAGGTATCCGTGCCTG
TTTGTGTGTACATGAAACGTACGAAAAACATGGTATTTCGTTGTGTTCAA
CTACTCGTCGCCGTACTCGTTTTTGCGACTCATGTAATTGCTTGTATATA
TTTCACGCACGAGATATCTTGCTTGAGTGTCTGGTTGGCACAGACACGAA
GTTCAAGTTAATCTTGTAATACAGGTACGTGAGCAGTAAATACTCGATAC
TTGCAAGAGAGGTTCTTAAGTGTACCGTCCAATTTTCACCTCTAGGGACT
CAGACGTTAAATAGCTGAACCGTCTCCTAGTGTGTTTCTTTCTTCCTTTG
TTTTTTTGTTTATTTTTTAATTTGTTAATTTGTTAATTTTCTATTTGGAA
AAATAATTTGATAAAATACACTCAGGTAAAACGAATCGCTAAAGTCGCGT
ACGAGGTGGCCATGAGGCGAGGTAAGAAGCTCTGCTCTGTCGACAAAGCC
AACGTGCTAGACGTAAGTCAGCTGTGGAGAGAGATCGTGATCGAGATGAA
TGAGAACTACCCGGAAGTCGAGCTGAGCCACCAGTACGTCGACAACGCCG
CGATGCAGCTAATCCGGTGGCCGAAGCAGTTCGACGTGATGGTGACTGGA
AATATTTTCGGGGACATTCTCTCCGACGAGGCTTCTATGCTGGTGAGAGT
AAGGCAGTTTGCTACTTTTCCAAAATAATTGTGGTTGACGATTCATTTCT
TGTATGATTAGCGCTCTGCTGTTGGCGCTGATCTGAGAGAAAGCTCGTGC
TGCGCGCGCGTCAGAACTACTCAGGACGACGGAGCACGTCAGAATTTTCG
GGTAAATTTTGGATCTCGTATGCCACTTGCTGAGCTCGTATGGTCAACCA
TGCTTTTAGAGAAAAGTACAAACGTTTACAAGGCAAAAGAGAGATACGCA
CACAGAGAGGAAAATCGAGACGCAATACCATGTGCTTGACATTTGATGTG
ACGGTAGTACAGCTGACAGGCTGCATTTTTTTGTTTTTTTAACCCCCCGG
AGGCTGAGGCAAAAACCTCTAACCGATGCTTGCCATACCGAAGTACGTCT
ACATTTCTTTTACAGAATAGAGTTATTTGTTCCTCTGCGGGTTAGACGCC
ACCCCAGTTCGGCCGAACCAAGTAGGCAGTGTGGGGGTTGCACCCACTTA
AAGACCTCTGACTACCTCAGCCTTCCGGAGGTTAAAAAAAAAAAAAAAAG
ACCTCTGACTAGACTTCCAGTCATGCTCAGTTCACGAGCTACTCTACCCG
TTCGGGCGTAGGTCCGTGGGACAGGCTGCAATACACACATTGGTCCGGTC
GATCGGTGGCAGCGAGCTGGATAGCGCGAACAACATTGTACAGCCAGTAG
ATTTCCTCATGGCCGCAGAAGAAACAGAGAGTAAAGAAGGATGCATGGAG
TACAGTACCGTTGGTGTACTGCTTCATCTTATCTGATATATGCGCGGTGA
TACTAAGGTACCGGCAACACGACGAAGAGAGGGAAAGAGGTTTGCAGGCA
CCAGTATCTCCTGAGGGTTCCCTCGCGAGTGATAGCCGTTGCGTGTCTGG
CGTCCTGTTATGCGTTCTGGCACCCACGGCACACGGCAGCAGACCGCCCG
CCACAGTCATTGCAGTCGGAACATGACAGTATTACTTGTGCCGTAGTTGA
TCGGCAATAGGGTTCCTGAAAATCAAGTTGTTCCTGCTATCAATTCTTTT
TTTTTCTTGCAGAAATCGAAGGGTTAACAGTGTGTGTGTGTGTGTGAGAG
GCTGCTAAGGCTGCTTAGGTAAGGTAGCAAGCACTGTCACACCGTCAAAA
ATTCCCTCCGAGGGAGGCTCTATCGGGGGAGCACCCTTCCGGGGGCGGGT
CTCGGAGCCTTTGACAGGATTTTGCCCAAGTTGTAAATTACACTGTTACT
TCCTTTCTTCGGCCTGGCTCTTACACAAGAATGTTGGCGTTTTGTGTCTT
CAATATTTTTTCTGTCATGGGGGGATGGACAGGTGGGGTCCCTTGGCATG
CTTCCCTCCGCATCTATGGGAGACCCGTCAGGCCCTGGCGTCTTCGAGCC
TTGCCACGGCTCCGCCCCGGACATCGCTGGTCAAGACAAGGCAAACCCTC
TGGTGGGAAGAAAGTGGAAACAGGCTCTTTTTGTGTTCTTCTTATTGTTG
TTGTTGGCGTGCTTCCTGGAGTATGTAGTATCGCGTTTAGTTTCACGTAC
ACGTAACCTGTAGAAAATATGTCCATAACATTTCATTCATTCATTCATTC
ATCGCTCAGCAGGCGTTTTGTGCCGACTGCTGAGTAATTCCACAAAGCAA
TATGATAGCACTCTAGAGTTAAGAGTGGAAATAGAGCTATAAACCTTGAG
TCCTCCTGATGAAGACGAATACAAGACACTAAGAAATACCAGTAAACCCC
GAACAAATATAGTATTTAATATACTCTGTACTCCGTTACCCACCCAAAAT
TTCGGACAAACGATGTACAGTAGAAAAATCTGTAATATCTGGTGAGTGTT
GTACATGGTGAATTCGATGCAAGATATTTTTCAATCGCACAAATGTTGTG
TTGGACATGCGCTGTGCCGTCAGTATGTTGTGTGAGAGTAGAATTGCAAC
ATTTCCCAGGTCAGTGGTTTTGTACGTGGCCAAGCAACCTGCAGTGGGAC
TTGAGTACAACGTTTTTGTTGTGCGGCCGGGGACACCCGCGATACCGCCC
TCAGTGGACAATGCTTGCGTGAACAAGCGATGAGAAATGGTCCCGTAATG
AGACCTTTATCGGGATGAATACTAGTGTAAATGGACGATTCCTAGCGAGG
CATTTGAGCATGGCATATGAGTAAGTGTTTTTCCTGAAAAGTTTCTTGTT
AGTTGTGCGTAATATTTCGGGGGGTGAAGGAGGCCTTGGCAGAATAGAGG
GGTCACGATAGCATCTGTAAAACTGTGTTTTTTCTGCCTTATTCGTACCC
TGTCTTTGTCGTCGTGATGATGGATTCCGTGCAGTTGAAAAAACCCGCTG
CACTTGGGGAGAAGATCAATGTGCACGCGCTACTCCTAGTTCGTAGTTGG
TTTTTTGCACCCTCGGCGAGCGTTTTCGTTTGTTCAATTGAATTAGAGGA
GAGGTTGGGTCGGTTTTGGAAGTACATTTTTGTGATTGCTTTAGTCGTTT
TGAGGGTGGAGTTGATTAAATTATTTTCCACACAGATAGCTTGAATAAAT
ACTACTACTACTACTACTGATGCTAATACTAAATACTAGTAATAATGAGG
ATAACCGTACATTACTTGGTGTTATTATTTTTTTCCGTAACTGCTTTGCC
CACACTGACCCTTGGGCAGTTACGGAAGTGCATGGACAGTAGATGGAGAC
TAAAATCACTATGGTGTCGATCAATAGATAATCTATATCTAGAGTTGAGT
AGGGGCTCTGTAGGTGACATGTTTTGATACTAAGTGTACTACTTGACGGT
ATCGAACAGAAAATTATGTCGTGGGTCTATTATATATACCGGTGTTTCTT
ATTCCCGCATCGAAAAGCCGTAGAGCTCTGTGTCCATGTCCGCACACTCA
AATTTTCGAAACTAATCACTATACAATCTGCAATATACGACTGATTGCAT
GGGCTTTGTATCTGTGATCAACTTTCTACTACTAGCAAAGACACGCTTGA
ATTCCTTGACGGCTTGTCGGTTTAACTTGATTAGGTGAAAAGCGTACGTG
CTCGTGACAATATATCGTTTCTCGGGTCATCTCTTCCTTGCATTGGCCTC
AGTTAAAAAGTAAAAATGAAACGTGCCGGTGAAAAAAAGTTGAACCTCGA
AAGGATGAGGGCAAGAACAATCCGTTGAAGACAGGCAACAATGTCGTACA
AACTACACAATATATGCATATACGCGTCAATACAATACATGCATATACGC
GTCCAAAACAAATCACACGGCATTATTTTCAGGCCATGATCCTATCGGCG
GCGATGATGCTCCGATACGATCTGGGGCGTGCGGCCGAGGCGGACCTTGT
GGAGGCCGCGGTAGACGCTGTGCTGGACAAGGGGTACGCGACGGCCGACA
TCACGCGAGCGGGGAGCACTCCCGTGGGATGCAGGGAGATGGGGGACAAG
GTCAAGGAGGAGCTATCGAGGCTCTTGGCGTCTGCAGGGGCGGTCGCGGG
TTCCGCCGCCGCACCCGCTACGGCTGCTCGATGATTTTTGTTTTTTTCTG
TTTGGTTTCTTCGATTTCCCCCGGTCTTGAGATGAGCCGCATAATCTTGC
TGTTCCTTGGGGTTTTTTTGTTGGGTATTTTTAATGAAACGTGATATTAC
TCCTCGTATCTTGGGGTGTGCATTGTCTGTCTCAGGATATCATTTTTTTT
TTTTTTTTGCCTAGGAATGAATGGCAATGGTGTGGACTTTTTTTTTTTTG
TCAGGTCCCCGAAAATTGAACCATTTTTAATGTTTTCTAAACAACTGTCG
ATCAACAAATGTATTCGTAATGCCTTACAATCATATATATCCGTTTAATC
AGTTGTCCGTGGTGTAAGTTGCAAGGTTGTCCTCGGCCGCGGTGTTTTTC
GTTGAGACATCTTTGCAGTATAGGAAGGGGCTAAATAGCTTCAAGAGTTC
TCATATTTTCTCTCTCCACTTATTTAAGGTCAAAGCAAGGACGTTGGGTG
ATCGTTCTTGCGTCTTTCGCGTGTTCCATGTTGCGTGGATGATCCCCGCT
GCCCTGGTCGTTTTTGTTAGTGTTTTCTGCCTTCTATTATTGAACATGGC
CGACGACAGACTTGGAGGAATGAGCGCTGTTGTACGGACCTACGCCCGAA
CGGGTAGGGTAGCTCGTGTACTGAGCATGACTGGAAGTCTAGTCAGAGGT
CTTTT back to topCoding sequence (CDS) from alignment at H-paniculata_contig2249:2..14756- >mRNA_H-paniculata_contig2249.5985.1 ID=mRNA_H-paniculata_contig2249.5985.1|Name=mRNA_H-paniculata_contig2249.5985.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2310bp|location=Sequence derived from alignment at H-paniculata_contig2249:2..14756- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGTGGAGGCAAAGGATAGCTATGACGTCATGCTGCTGCCGGGAGA
CGGAATCGGGCCCGAAATTACAACGTCTACGGTGAACGCGCTGGAACCAC
TTCAATCGCTCTTCAAGATCAACTTCAAGGAGATGGTTGTGGAGGCAAAG
GATAGCTATGACGTCATGCTGCTGCCGGGAGACGGAATCGGGCCCGAAAT
TACAACGTCTACGGTGAACGCGCTGGAACCACTTCAATCGCTCTTCAAGA
TCAACTTCAAGGAGGCGCTAATTGGGGGTGCCGCTATCGACGCGGAGGGG
ACGCCCTGGCCGGAGTCTACTCTGGCTCAAGCAAAGGCGCTAATTGGGGG
TGCCGCTATCGACGCGGAGGGGACGCCCTGGCCGGAGTCTACTCTGGCTC
AAGCAAAGGTCTCCGACTCTATCCTCTTGGCCGCAATCGGCGGCCCTAAG
TGGGACGACAACCCAAGGGAGCTTCGCCCAGAAACGGGGCTGCTGGCCAT
GCGCTCCAACCTCGGCCTTTTCGCGAATCTCCGTCCGGCGAAGGTCTCCG
ACTCTATCCTCTTGGCCGCAATCGGCGGCCCTAAGTGGGACGACAACCCA
AGGGAGCTTCGCCCAGAAACGGGGCTGCTGGCCATGCGCTCCAACCTCGG
CCTTTTCGCGAATCTCCGTCCGGCGAAGGTGATGAAGGAGCTGGTTGATG
CCTCTTCGCTGAAACCTGAGATTGTGGAGGGCGTGGACATCATGGTGGTA
CGGGAGCTCACGGGCGATGTTTACTTCGGAACTCCAAAGGTGATGAAGGA
GCTGGTTGATGCCTCTTCGCTGAAACCTGAGATTGTGGAGGGCGTGGACA
TCATGGTGGTACGGGAGCTCACGGGCGATGTTTACTTCGGAACTCCAAAG
GGGATCGACACGCTGGAGTCAGGGGAGAAAGTGGGGTACAACAACATGAT
TTACCACGAGCACGAGGGGATCGACACGCTGGAGTCAGGGGAGAAAGTGG
GGTACAACAACATGATTTACCACGAGCACGAGGTAAAACGAATCGCTAAA
GTCGCGTACGAGGTGGCCATGAGGCGAGGTAAGAAGCTCTGCTCTGTCGA
CAAAGCCAACGTGCTAGACGTAAGTCAGCTGTGGAGAGAGATCGTGATCG
AGATGAATGAGAACTACCCGGAAGTCGAGCTGAGCCACCAGTACGTCGAC
AACGCCGCGATGCAGCTAATCCGGTGGCCGAAGCAGTTCGACGTGATGGT
GACTGGAAATATTTTCGGGGACATTCTCTCCGACGAGGCTTCTATGCTGG
TAAAACGAATCGCTAAAGTCGCGTACGAGGTGGCCATGAGGCGAGGTAAG
AAGCTCTGCTCTGTCGACAAAGCCAACGTGCTAGACGTAAGTCAGCTGTG
GAGAGAGATCGTGATCGAGATGAATGAGAACTACCCGGAAGTCGAGCTGA
GCCACCAGTACGTCGACAACGCCGCGATGCAGCTAATCCGGTGGCCGAAG
CAGTTCGACGTGATGGTGACTGGAAATATTTTCGGGGACATTCTCTCCGA
CGAGGCTTCTATGCTGGTGGGGTCCCTTGGCATGCTTCCCTCCGCATCTA
TGGGAGACCCGTCAGGCCCTGGCGTCTTCGAGCCTTGCCACGGCTCCGCC
CCGGACATCGCTGGTCAAGACAAGGCAAACCCTCTGGTGGGGTCCCTTGG
CATGCTTCCCTCCGCATCTATGGGAGACCCGTCAGGCCCTGGCGTCTTCG
AGCCTTGCCACGGCTCCGCCCCGGACATCGCTGGTCAAGACAAGGCAAAC
CCTCTGGCCATGATCCTATCGGCGGCGATGATGCTCCGATACGATCTGGG
GCGTGCGGCCGAGGCGGACCTTGTGGAGGCCGCGGTAGACGCTGTGCTGG
ACAAGGGGTACGCGACGGCCGACATCACGCGAGCGGGGAGCACTCCCGTG
GGATGCAGGGAGATGGGGGACAAGGTCAAGGAGGAGCTATCGAGGCTCTT
GGCGTCTGCAGGGGCGGTCGCGGGTTCCGCCGCCGCACCCGCTACGGCTG
CTCGATGAGCCATGATCCTATCGGCGGCGATGATGCTCCGATACGATCTG
GGGCGTGCGGCCGAGGCGGACCTTGTGGAGGCCGCGGTAGACGCTGTGCT
GGACAAGGGGTACGCGACGGCCGACATCACGCGAGCGGGGAGCACTCCCG
TGGGATGCAGGGAGATGGGGGACAAGGTCAAGGAGGAGCTATCGAGGCTC
TTGGCGTCTGCAGGGGCGGTCGCGGGTTCCGCCGCCGCACCCGCTACGGC
TGCTCGATGA back to top
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