mRNA_H-paniculata_contig22469.5978.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22469.5978.1
Unique NamemRNA_H-paniculata_contig22469.5978.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A2H9ZYF2_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZYF2_9ASPA)

HSP 1 Score: 218 bits (555), Expect = 5.480e-61
Identity = 117/296 (39.53%), Postives = 175/296 (59.12%), Query Frame = 1
Query:    1 SDQGGEFTGEAFRQFCAENGIKQEFYAAYIPPQNGVAERSWRSVFEMNRSKMITANMGRTYWAEAARAAVYCLNCAPTRPHNGGTPYEKWHGTTPKLDHLRAFGCTAYVMFQSQ*RRKLDDTAWMGVFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEE---DFETSHRGQPEH--DGTRHMEGLFSAPAEEVI--------GRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE*EGMDVDAAYLNAPVEGELLVKLPPGF 849
            +D+G EF    F +FC  NGIK++  A+Y P QNGVAER  R++ EM RS +   N+  ++WAEA    V+ LN +PT+     TPYE W+G  P + +LR FGC  Y    ++ R+K D  +   +F+GY +++  YR+YNP  K + +SR+V FDE    D++ +   +  H  +  + ME   SA  +           G+AAI +KW+ + K   DGSV +YKARLV +G++Q    D+FET +PVARM T+RT+ SLAA  ++     DV +A+LN  +  ++ V+ P GF
Sbjct:  379 TDRGSEFCSNEFTKFCQLNGIKRQLTASYTPQQNGVAERKNRTIVEMARSMLKAKNLPISFWAEAVATTVHLLNISPTKAVWNSTPYEAWYGVKPNVSNLRVFGCIVYAHVNTEVRQKFDSKSTKCIFIGYSQETKGYRVYNPITKQLYVSRDVIFDENACWDWKPTCFEEAIHREEWKQSMEEEISAINKNKTWALTDLPEGKAAIGLKWVFRVKYNVDGSVHKYKARLVVKGYAQQAGIDYFETFSPVARMETIRTVLSLAAHYNWNVYQFDVKSAFLNGDLFEDVYVEQPQGF 674          
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A2I0X5W4_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X5W4_9ASPA)

HSP 1 Score: 195 bits (496), Expect = 6.070e-53
Identity = 106/303 (34.98%), Postives = 159/303 (52.48%), Query Frame = 1
Query:    1 SDQGGEFTGEAFRQFCAENGIKQEFYAAYIPPQNGVAERSWRSVFEMNRSKMITANMGRTYWAEAARAAVYCLNCAPTRPHNGGTPYEKWHGTTPKLDHLRAFGCTAYVMFQSQ*RRKLDDTAWMGVFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEEDFETSHRGQPEHDGTRHMEGLFSAPAEEVI--------------------GRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE*EGMDVDAAYLNAPVEGELLVKLPPGF 849
            SD+GGE+    F  FC + G+++     Y P QNGVAER  R++ +M RS + +  M + +WAEA + ++Y  N  P       TP E W G  P + HL+ FG  AY     Q R KL+D +   VF+GYDE +  Y++ +P NK V LSR+V  +E      +    E +     E + +   +E +                    G   I +KW+ K+K+   G + RYKARLVA+G+ Q    D+ E  APV RM T+R + S AA+ ++    MDV +A+LN  +E E+ ++ PPG+
Sbjct:  499 SDRGGEYNSAEFTSFCEQQGVRRFLTTPYSPQQNGVAERKNRTILDMVRSMLKSKEMPKEFWAEAVQCSIYIQNRCPHMKLEDKTPQEAWSGKKPTVSHLKIFGSVAYAHVPDQQRTKLEDKSKKYVFIGYDEQTKGYKLLDPINKKVVLSRDVRVNEARKWDWNNSSEEQENISFEEAVKNEKWKEAMDEEIKSIERNKTWELAELPKGSRPIGVKWVFKKKMNAQGEIDRYKARLVAKGYIQKAGIDYDEVFAPVTRMETIRLLISYAAQFEWPIYQMDVKSAFLNGVIEEEIYLEQPPGY 801          
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A438J1J0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=4 Tax=Vitis vinifera TaxID=29760 RepID=A0A438J1J0_VITVI)

HSP 1 Score: 193 bits (490), Expect = 4.310e-52
Identity = 122/338 (36.09%), Postives = 174/338 (51.48%), Query Frame = 1
Query:    1 SDQGGEFTGEAFRQFCAENGIKQEFYAAYIPPQNGVAERSWRSVFEMNRSKMITANMGRTYWAEAARAAVYCLNCAPTRPHNGGTPYEKWHGTTPKLDHLRAFGCTAYVMFQSQ*RRKLDDTAWMGVFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEE---DFETSHRGQ----PEH----------DGTRHMEGLFSA-------PAE---------------------------EVIGRA----AICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE*EGMDVDAAYLNAPVEGELLVKLPPGF 849
            SD G E+T E F +FC E GI+ +    Y P QNGV+ER  RS+ EM R  +    + +  WAEAA  AV+ LN  PTR     TP+E W G  P L +LR FGC  +       R KLD  A  GVF+GY   S +YRI+ P+N  + +SR+V F E+   ++E S + Q    P++           G R +  ++         PAE                           E++ R      I +KW+ + KL  DGSV +YKARLV +G+SQ+   DF ET APVAR+ T+R + +L A+  ++   +DV +A+LN  ++ E+ V+ P GF
Sbjct:  579 SDNGKEYTNEIFDKFCEEAGIEHQLTTPYTPQQNGVSERKNRSIMEMTRCMLHEKELPKKLWAEAANTAVFLLNRLPTRVLQKKTPFEAWFGYKPDLKNLRTFGCLCFSYVPQVKRDKLDKKAEPGVFIGYSNSSKAYRIFQPQNGKILVSRDVKFMEDRQWNWEESIKMQLPKVPQYFDEDIDDVPVRGIRSLSDVYERNNVAVFEPAEFEEAEKDDKWIEAMKEELRMIEKNDTWELVDRPQHRKVIGVKWVYRTKLNADGSVNKYKARLVVKGYSQVFGVDFSETFAPVARLDTIRMLLALTAQKGWKTYQLDVKSAFLNGYLQEEIYVEQPEGF 916          
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: Q2RBH8_ORYSJ (Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q2RBH8_ORYSJ)

HSP 1 Score: 181 bits (459), Expect = 5.990e-48
Identity = 107/283 (37.81%), Postives = 143/283 (50.53%), Query Frame = 1
Query:    1 SDQGGEFTGEAFRQFCAENGIKQEFYAAYIPPQNGVAERSWRSVFEMNRSKMITANMGRTYWAEAARAAVYCLNCAPTRPHNGGTPYEKWHGTTPKLDHLRAFGCTAYVMFQSQ*RRKLDDTAWMGVFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEEDFETSHRGQPEHDGTRHMEGLFSAPAEEVIGRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE*EGMDVDAAYLNAPVEGELLVKLPPGF 849
            SD GGEF   +F QFC E G++ EF +  +P QNGV ER  R + EM R+ +      R +WAE    A Y  N    R   G T YE   G  PK+ HLR FGC  +V+ +S    K +  +  G+FLGY   +  YR+       +  +  V FDE                       ++P E   G   I  KW+ K K  EDG + R KARLVAQGF+Q+E  DF ET A VAR+  +R + + A    F+   MDV +A+LN  ++ E+ VK PPGF
Sbjct:  724 SDNGGEFKNASFEQFCNERGLEHEFSSPRVPQQNGVVERKNRVLIEMARTMLNEYKTPRKFWAEVINTACYISNRVLLRSKLGKTSYELRFGHQPKVSHLRVFGCKCFVL-KSGNLDKFEARSTDGLFLGYPAHARGYRVLILGTNKIVETCEVSFDE-----------------------ASPVEPPSGHNIIGTKWVFKNKQNEDGLIVRNKARLVAQGFTQVESLDFDETFASVARIEAIRLLLAFATSKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGF 982          
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A1R3GE14_COCAP (Integrase, catalytic core n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3GE14_COCAP)

HSP 1 Score: 177 bits (448), Expect = 1.690e-46
Identity = 107/318 (33.65%), Postives = 163/318 (51.26%), Query Frame = 1
Query:    1 SDQGGEFTGEAFRQFCAENGIKQEFYAAYIPPQNGVAERSWRSVFEMNRSKMITANMGRTYWAEAARAAVYCLNCAPTRPHNGGTPYEKWHGTTPKLDHLRAFGCTAYVMFQSQ*RRKLDDTAWMGVFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEE---------------------------------DFETSHRGQPEH--DGTRHMEGLFSAPAEEVIGRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE*EGMDVDAAYLNAPVEGELLVKLPPGF 849
            SD GGE+T   F++  A  G   +      P QNG+ ER  R + E  RS +++++M  ++W EA   +VY +N  P+   +G +P+E+     P    LR FGC  +V+     R KL   + M VF+GY  +   YR Y+P  + +++SRNV F E                                  D E++     E+  + T +  G  S+   E  G+ AI  KW+ K K K DGS+ RYKARLVA+G++Q    D+ ET APVA+M+T+RT+ S+AA  ++    MDV  A+LN  +  E+ ++ PPG+
Sbjct:  590 SDSGGEYTSTQFQELLASEGTLFQSSCTDTPQQNGIVERKHRHIIETARSLLLSSSMPSSFWGEAVLTSVYVINRIPSSITSGISPFERLFKVQPNYSELRVFGCVCFVLLPKNERTKLTSRSAMCVFMGYGIEQKGYRCYDPIARRIRVSRNVAFFEHIPYYTVPESSSTLTKDELHALDPFSNSDLFASNDIESATLLNSENLQNSTENSTGDSSSTNME--GKEAIGCKWVYKVKTKSDGSIERYKARLVAKGYAQEFGVDYEETFAPVAKMTTVRTLISVAASREWPLFQMDVKNAFLNGDLHEEVYMQPPPGY 905          
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A6P8C8B8_PUNGR (uncharacterized protein LOC116193313 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A6P8C8B8_PUNGR)

HSP 1 Score: 176 bits (445), Expect = 3.080e-46
Identity = 102/283 (36.04%), Postives = 150/283 (53.00%), Query Frame = 1
Query:    4 DQGGEFTGEAFRQFCAENGIKQEFYAAYIPPQNGVAERSWRSVFEMNRSKMITANMGRTYWAEAARAAVYCLNCAPTRPHNGGTPYEKWHGTTPKLDHLRAFGCTAYVMFQSQ*RRKLDDTAWMGVFLGYDEDSPSYRIYNPE-NKSVQLSRNVGFDEEDFETSHRGQPEHDGTRHMEGLFSAPAEEVIGRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE*EGMDVDAAYLNAPVEGELLVKLPPGF 849
            D G E+T   F++ C  +GI  +    Y P QNGV+ER  RS+ EM R  +    M + +WAEAA  AV+ LN  PT+  +  TP E W G  P + +L+ FGC  Y       R KLD  A  G+F+GY  +S +YRIY P  NK  +  +           SH+                      IGR  +  ++ L+ KL  DGSV +YKARLV +G++Q+   D+ ET APV R+ T+R + ++A + +++   +DV +A+LN  +E E+ V+ P GF
Sbjct:  266 DNGSEYTSGRFKEICETSGIMHQLTVPYSPQQNGVSERKNRSIMEMARCLLQEKEMPKKFWAEAANTAVFLLNRLPTKSLDKRTPVEAWCGRKPSIANLKVFGCICYSYIPQAKRDKLDKKAEAGIFIGYSLESKAYRIYQPSRNKRKEKWK-----------SHK----------------------IGRQHL-RRFHLRTKLNSDGSVNKYKARLVVKGYAQIWGVDYSETFAPVERLDTIRLLLAVAGQKNWKVYQLDVKSAFLNGVLEEEIYVEQPEGF 514          
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A438FNV5_VITVI (Isoflavone reductase-like n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FNV5_VITVI)

HSP 1 Score: 176 bits (446), Expect = 3.290e-46
Identity = 105/298 (35.23%), Postives = 151/298 (50.67%), Query Frame = 1
Query:    1 SDQGGEFTGEAFRQFCAENGIKQEFYAAYIPPQNGVAERSWRSVFEMNRSKMITANMGRTYWAEAARAAVYCLNCAPTRPHNGGTPYEKWHGTTPKLDHLRAFGCTAYVMFQSQ*RRKLDDTAWMGVFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEED--------------------FETSHRGQPEHDGT------RHMEGLFSAPAEEVIGRA----AICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE*EGMDVDAAYLN 804
            SD G E+T E F +FC E GI+ +    Y P QNGV+ER  RS+ EM R  +    + +  WAEAA  AV+ LN  PTR     TP+E W G  P L +LR FGC  +       R KLD  A +GVF+GY   S +YRI+ P+N  + + +    D +D                    FE +   + E D          +  +      E++ R      I +KW+ + KL  DGSV +Y+ARLV +G+SQ+   DF ET APVAR+ T+R + +L A+  ++   +D   A+ +
Sbjct:  578 SDNGKEYTNEIFDKFCEEAGIEHQLTTPYTPQQNGVSERKNRSIMEMTRCMLHEKELPKKLWAEAANTAVFLLNRLPTRVLQKKTPFEAWFGYKPDLKNLRTFGCLCFSYVPQVKRDKLDKKAKLGVFIGYSNSSKAYRIFQPQNGKILVPQYFDEDIDDVPIRGIRSLSDVYERNNVAVFEPAEFEEAEKDDKWIEAMKEELRMIEKNDTWELVDRPQHRKVIGVKWVYRTKLNADGSVNKYRARLVVKGYSQVFGVDFSETFAPVARLDTIRMLLALTAQKGWKTYQLDAPRAWYS 875          
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A6A3D4Q3_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3D4Q3_HIBSY)

HSP 1 Score: 174 bits (442), Expect = 7.290e-46
Identity = 107/303 (35.31%), Postives = 158/303 (52.15%), Query Frame = 1
Query:    1 SDQGGEFTGEAFRQFCAENGIKQEFYAAYIPPQNGVAERSWRSVFEMNRSKMITANMGRTYWAEAARAAVYCLNCAPTRPHNGGTPYEKWHGTTPKLDHLRAFGCTAYVMFQSQ*RRKLDDTAWMGVFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEE---DFETS-----HRGQ------------PEHDGTRHMEGLFSAPAEEVIGRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE*EGMDVDAAYLNAPVEGELLVKLPPGF 849
            SD+GGE+   AF ++C E GIK+   A Y P QNGVAER  R++ +M RS + +  M + +WAEA +  VY  N  P        P E W G  P + H + FG  AY     Q R KLDD +   + +GYDE +  +++++P  K V +SR+V  +E    D+E S      +G+            P +  T + E     P  + I    I +KWI K+K+   G + RYKA LVA+G+ Q    D+ E  A V RM T+R + S  A+  ++   MDV + +LN  +E E+ V+ PP +
Sbjct:  213 SDRGGEYMSTAFTKYCEEQGIKRLLTAPYSPQQNGVAERKNRTILDMVRSMLNSKYMPKEFWAEAVQCTVYVQNQCPHAKLVNQIPQEAWSGRKPTVSHFKVFGSVAYAHVPDQRRIKLDDKSKRYIIIGYDEKTKGFKLFDPIEKKVVVSRDVHVNESSSWDWEKSTEVIFEKGEASTGAIITPTNTPVNSPTINDEDEPRQPWMQSI--QPIGVKWIYKKKMNAQGEIERYKAMLVAKGYRQKAGIDYDEMFALVTRMETIRLLISQTAQFKWKIFQMDVKSTFLNGVLEEEVYVEQPPRY 513          
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: Q8H7M2_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q8H7M2_ORYSJ)

HSP 1 Score: 174 bits (440), Expect = 1.930e-45
Identity = 108/303 (35.64%), Postives = 163/303 (53.80%), Query Frame = 1
Query:    1 SDQGGEFTGEAFRQFCAENGIKQEFYAAYIPPQNGVAERSWRSVFEMNRSKMITANMGRTYWAEAARAAVYCLNCAPTRPHNGGTPYEKWHGTTPKLDHLRAFGCTAYVMFQSQ*RRKLDDTAWMGVFLGYDEDSPSYRIYNPENK-------SVQLSRNVGFDEEDF--ETSHR--GQPEHDGTRH-----MEGLFSAPAEEVIGRAAICM----KWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE*EGMDVDAAYLNAPVEGELLVKLPPGF 849
            SD+GGEF    F  FC E+G+  E    Y P  NG+AER  R++ ++  + + TA + + +W EA   + + LN  P + +   TPYE W G  P L +LR +GC A V      +RKL       VFLGY   S +YR    +++       ++  SR+  F E  F  + +H+    P+ D  +      M+ + +    EV  R   C     KW+ K+KL+ DG++ +YKARLVA+G++Q E EDFF+T +PVAR++T+R + SLAA        MDV  A+LN  ++ E+ +  P GF
Sbjct:  511 SDRGGEFFSNEFDLFCEEHGVIHERTPLYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWEEALLTSNHVLNRVPNK-NKDKTPYEIWTGRKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFPMKDTHKVYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGF 812          
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Match: A0A4Y9ZRJ7_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZRJ7_9AGAM)

HSP 1 Score: 170 bits (430), Expect = 4.260e-44
Identity = 108/298 (36.24%), Postives = 150/298 (50.34%), Query Frame = 1
Query:    1 SDQGGEFTGEAFRQFCAENGIKQEFYAAYIPPQNGVAERSWRSVFEMNRSKMITANMGRTYWAEAARAAVYCLNCAPTRPHNGGTPYEKWHGTTPKLDHLRAFGCTAYVMFQSQ*RRKLDDTAWMGVFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEEDFETSHRGQPEHDGTRHMEGLFSAPAEEV---------------IGRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQMEREDFFETSAPVARMSTLRTIFSLAAELDFE*EGMDVDAAYLNAPVEGELLVKLPPGF 849
            +D GGE+  +   ++ AE GI  E  A Y P Q GVAE    ++ E   + +    + R  W E     VY  N  PT   +G TP++ WHG  P + HLRAFGC A+ +   Q R K D  +   V +GY+EDS +YR+++   + +   R+V F E DF  + +   E       E   SA  EE                 GR AI   W  K K   +G+  RY+ARLVAQGFSQ    DF ET +PVAR  + R +F+L A   +  E +DV +AYLN  ++ E+ +  P GF
Sbjct:  561 ADXGGEYVSKEMEEYLAEAGIILELTAPYSPAQXGVAEXLNCTIVERXIAVVHQTGLLRFLWPEVVSTQVYLKNLGPTTALDGKTPFKVWHGFKPSVRHLRAFGCKAFGLIPKQKRTKWDAKSVQCVLIGYNEDS-AYRLWHGPTRRIIKLRDVEFFENDFPLAPKTYREAVWGPDREKWESAMQEEYDALLKTGTWEKVRLPAGRKAIGFCWTYKVKHDANGNPVRYRARLVAQGFSQRPGVDFNETHSPVARFESFRLVFALVACFGWLFEQVDVKSAYLNGTLDKEIFMHQPEGF 857          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22469.5978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2H9ZYF2_9ASPA5.480e-6139.53Retrovirus-related Pol polyprotein from transposon... [more]
A0A2I0X5W4_9ASPA6.070e-5334.98Retrovirus-related Pol polyprotein from transposon... [more]
A0A438J1J0_VITVI4.310e-5236.09Retrovirus-related Pol polyprotein from transposon... [more]
Q2RBH8_ORYSJ5.990e-4837.81Retrotransposon protein, putative, unclassified n=... [more]
A0A1R3GE14_COCAP1.690e-4633.65Integrase, catalytic core n=1 Tax=Corchorus capsul... [more]
A0A6P8C8B8_PUNGR3.080e-4636.04uncharacterized protein LOC116193313 n=1 Tax=Punic... [more]
A0A438FNV5_VITVI3.290e-4635.23Isoflavone reductase-like n=1 Tax=Vitis vinifera T... [more]
A0A6A3D4Q3_HIBSY7.290e-4635.31Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
Q8H7M2_ORYSJ1.930e-4535.64Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A4Y9ZRJ7_9AGAM4.260e-4436.24Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22469contigH-paniculata_contig22469:2784..3884 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score86.7
Seed ortholog evalue9.2e-15
Seed eggNOG ortholog3641.EOX92993
KEGG koko:K20093
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial protein
EggNOG OGs37THH@33090,3GG2K@35493,COG2801@1,KOG0017@2759
EC3.6.4.12
COG Functional cat.O
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons2
Model size849
Cds size399
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22469.5978.1prot_H-paniculata_contig22469.5978.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22469 2862..3512 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929623.9530067-UTR-H-paniculata_contig22469:2783..28611622929623.9530067-UTR-H-paniculata_contig22469:2783..2861Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22469 2784..2861 -
1691480940.2409449-UTR-H-paniculata_contig22469:2783..28611691480940.2409449-UTR-H-paniculata_contig22469:2783..2861Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22469 2784..2861 -
1622929623.9957755-UTR-H-paniculata_contig22469:3512..38841622929623.9957755-UTR-H-paniculata_contig22469:3512..3884Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22469 3513..3884 -
1691480940.272872-UTR-H-paniculata_contig22469:3512..38841691480940.272872-UTR-H-paniculata_contig22469:3512..3884Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22469 3513..3884 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929623.968621-CDS-H-paniculata_contig22469:2861..30811622929623.968621-CDS-H-paniculata_contig22469:2861..3081Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22469 2862..3081 -
1691480940.2513895-CDS-H-paniculata_contig22469:2861..30811691480940.2513895-CDS-H-paniculata_contig22469:2861..3081Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22469 2862..3081 -
1622929623.982843-CDS-H-paniculata_contig22469:3333..35121622929623.982843-CDS-H-paniculata_contig22469:3333..3512Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22469 3334..3512 -
1691480940.2652571-CDS-H-paniculata_contig22469:3333..35121691480940.2652571-CDS-H-paniculata_contig22469:3333..3512Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22469 3334..3512 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22469.5978.1

>prot_H-paniculata_contig22469.5978.1 ID=prot_H-paniculata_contig22469.5978.1|Name=mRNA_H-paniculata_contig22469.5978.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp
MGVFLGYDEDSPSYRIYNPENKSVQLSRNVGFDEEDFETSHRGQPEHDGT
RHMEGLFSAPAEEVIGRAAICMKWILKRKLKEDGSVARYKARLVAQGFSQ
MEREDFFETSAPVARMSTLRTIFSLAAELDFE*
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mRNA from alignment at H-paniculata_contig22469:2784..3884-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22469.5978.1 ID=mRNA_H-paniculata_contig22469.5978.1|Name=mRNA_H-paniculata_contig22469.5978.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1101bp|location=Sequence derived from alignment at H-paniculata_contig22469:2784..3884- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCAGATCAAGGAGGAGAGTTCACAGGAGAAGCGTTTAGACAATTTTGTGC GGAAAATGGCATCAAGCAAGAGTTTTATGCCGCCTACATCCCGCCGCAAA ACGGTGTGGCGGAGCGCAGCTGGCGTAGCGTTTTCGAGATGAACCGAAGT AAAATGATCACCGCCAACATGGGCCGCACGTATTGGGCGGAGGCAGCGCG CGCGGCTGTGTACTGCTTAAATTGCGCCCCGACGCGGCCGCACAACGGAG GGACGCCGTATGAGAAGTGGCACGGCACGACACCAAAGCTTGACCACCTT CGTGCCTTCGGCTGCACGGCGTACGTGATGTTCCAGTCGCAGTAGAGGCG CAAACTCGATGACACAGCGTGGATGGGGGTATTTCTGGGGTACGACGAAG ACAGCCCGAGTTATCGCATATATAACCCGGAAAACAAGAGCGTCCAGTTG AGCAGGAACGTGGGATTTGATGAAGAGGATTTCGAAACCAGTCATCGCGG ACAACCGGAGCATGACGGGACGCGACACATGGAAGGCCTGTTTTCAGCAC CGTCAGACACACCAGCGGTCACGCATGTCGCGCTCGAGGCGACCGAGAAG ACGTAACTAACGCGGAAGACCAGACGTCGGCGTCACAAATATCGCCCATA TTGCCCACAAATATCGCCCATATTGCCCGGTATCTAAGGGGGAGCCGAAA TCCACGGCAGAAGCATTAAACGGTCCAGAGGCGGGAAAATGGCACGCGGC AATGGAGGAAGAATGGGATGCATTGGTGGAAAATGGGACATGGGAAAGCG AAGAGCCGAGGAGGTTATCGGCAGGGCGGCGATTTGCATGAAATGGATTT TGAAGCGGAAACTGAAGGAGGACGGCAGCGTGGCACGCTACAAAGCGCGA CTGGTGGCTCAAGGCTTTTCACAGATGGAACGTGAAGATTTCTTTGAAAC CAGTGCCCCCGTAGCTCGCATGTCGACTTTGCGTACTATTTTTAGCCTGG CCGCCGAGCTTGATTTCGAATAAGAAGGCATGGACGTGGATGCGGCGTAT TTGAACGCCCCCGTAGAAGGAGAACTGCTTGTTAAGCTACCCCCCGGGTT T
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Coding sequence (CDS) from alignment at H-paniculata_contig22469:2784..3884-

>mRNA_H-paniculata_contig22469.5978.1 ID=mRNA_H-paniculata_contig22469.5978.1|Name=mRNA_H-paniculata_contig22469.5978.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at H-paniculata_contig22469:2784..3884- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGGTATTTCTGGGGTACGACGAAGACAGCCCGAGTTATCGCATATA
TAACCCGGAAAACAAGAGCGTCCAGTTGAGCAGGAACGTGGGATTTGATG
AAGAGGATTTCGAAACCAGTCATCGCGGACAACCGGAGCATGACGGGACG
CGACACATGGAAGGCCTGTTTTCAGCACCATGGGGGTATTTCTGGGGTAC
GACGAAGACAGCCCGAGTTATCGCATATATAACCCGGAAAACAAGAGCGT
CCAGTTGAGCAGGAACGTGGGATTTGATGAAGAGGATTTCGAAACCAGTC
ATCGCGGACAACCGGAGCATGACGGGACGCGACACATGGAAGGCCTGTTT
TCAGCACCAGCCGAGGAGGTTATCGGCAGGGCGGCGATTTGCATGAAATG
GATTTTGAAGCGGAAACTGAAGGAGGACGGCAGCGTGGCACGCTACAAAG
CGCGACTGGTGGCTCAAGGCTTTTCACAGATGGAACGTGAAGATTTCTTT
GAAACCAGTGCCCCCGTAGCTCGCATGTCGACTTTGCGTACTATTTTTAG
CCTGGCCGCCGAGCTTGATTTCGAATAAAGCCGAGGAGGTTATCGGCAGG
GCGGCGATTTGCATGAAATGGATTTTGAAGCGGAAACTGAAGGAGGACGG
CAGCGTGGCACGCTACAAAGCGCGACTGGTGGCTCAAGGCTTTTCACAGA
TGGAACGTGAAGATTTCTTTGAAACCAGTGCCCCCGTAGCTCGCATGTCG
ACTTTGCGTACTATTTTTAGCCTGGCCGCCGAGCTTGATTTCGAATAA
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