prot_H-paniculata_contig2244.5973.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2244.5973.1
Unique Nameprot_H-paniculata_contig2244.5973.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length702
Homology
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Match: D7FQX1_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX1_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 7.240e-107
Identity = 329/773 (42.56%), Postives = 386/773 (49.94%), Query Frame = 0
Query:   20 LMQPPETQNLFVGMSIFVAGIWMLNVSRRCYAVLQLRQALGTRRLVAIRGAGRRVQIFRLLGRNYLQRTLARNHLQALVHTRQAYPPKTMPCTLMLATPRPSGGVKAIL---------QTVPDSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQMECRVACTVELLWDVDLAVLGMELNVDGKLPLLPASTRPGAGGN-----------------------------------PTVDGVLRNSANGYSIGTNSRVVGGGSPARLPFMHAVAAGAHWMLAPVMRVFGGSGQRVGGHVNRVPPPSQSNP-------------------QXXXXXXXXXXXXXXXSGDAGVAGG---------------------------------RMIFSGVSGQVAGPVVGGTGMSNGGGGTTWTSGLGRRKS-VLLAGGAVGFGGNGSEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTAPRVVGSGSRSVFKTAPGDCYFR---------VGSGVPALVPGAVRG------TDGPSVRAAEV----------------AAGGGGGDGRRAWPSVRDSVPAGRCSLAVVIRGGEGAAGEIGDAAAGWRHRPTHRVAWQVVLLVQLKEQDA-EDGVPPQ-APSAQLLRHLVAVSKGEQGDAEAVYSFAEVFGAGDEQNDARSDTDDQGGDDNIQAGREVSGALLPSLSAGGGEADRRSGGRVEEPPEECVICLTDPKDTLLLPCRHLCVCSECFRHVDKCPVCRSAFDNYIVIQS 662
            ++QPPETQN+F+ +SIFV  +W++N SRRC+AV+QLR+ALG+RRLVAIRGAGRRV+IFRLLGRNYL          ALVHTRQAYPPKTMPC+L++A+     GVKAIL         Q  P    XXXXXXXXXXXXX                + ++CRVACTVELLWDVDL +LG E+ +  KL LLPAST  GAGG+                                                 S+ + S + G        +  AV+A          R+F    +R G  V   PP S S P                    XXXX            G  GV G                                    + + + GQ A     G G S GG G +W + LG RKS V  AGG  G    G+          XXXXXXXXXXXXX          KRT PR + +G   VF T PG+ YFR          G+   +    A  G       DG +  A                   AAGG      R WP V DSV AGRCSLA+VIR   G  GE GD A GWRHRPTHRV  QV LLVQL E+ A  DG P Q APSA+ LRHLVA+SKG  GD E++YSFAEVFGA DE   A       G   NI       G++  + S G G     +G   EE PEECVICLTDPK+TLLLPCRHLCVC+ECFRHVDKCPVCRSAFDNYIV+ +
Sbjct:    8 VVQPPETQNVFLCLSIFVGLLWIINSSRRCWAVVQLRRALGSRRLVAIRGAGRRVRIFRLLGRNYLXXXXXXXXXXALVHTRQAYPPKTMPCSLLVASD--PDGVKAILHPRDSGDDIQVDPPXXXXXXXXXXXXXXXXGALGARAEAGPLVGVSVVLDCRVACTVELLWDVDLTLLGREMGLHPKLHLLPAST--GAGGSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSSLSSLPGNA------WASAVSASR--------RLFRAGRERWGSRVAGAPPDSSSRPLGSRGPGRXXXXXXXXXXXXXXXXSGYPSNDVDEEMGGRGVGGALGXXXXXXXXXXXXXXXXXXXXXXDDNLGATAAEAVLASLDGQGARRAGTGNGGS-GGAGRSWAASLGLRKSSVFNAGGGDGSDAAGAGGTVGQALGFXXXXXXXXXXXXXPGVGMIGLCGKRTVPRALSAGGGRVFTTLPGESYFRGRQQSGEWNAGATATSAAGAAKTGXXXXXXVDGRATSAVSAFVXXXXXXXXXXERRPAAGG------RDWPRVGDSVRAGRCSLAIVIRPAAG--GETGDWA-GWRHRPTHRVTRQV-LLVQLTERSAGADGAPSQQAPSARCLRHLVAMSKGGDGDPESIYSFAEVFGASDEAGGAAR----PGLASNI-------GSIQATASRGAGAGGLGAG---EEVPEECVICLTDPKNTLLLPCRHLCVCTECFRHVDKCPVCRSAFDNYIVLSA 737          
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Match: A0A6H5K7X0_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X0_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 1.720e-100
Identity = 331/758 (43.67%), Postives = 389/758 (51.32%), Query Frame = 0
Query:   20 LMQPPETQNLFVGMSIFVAGIWMLNVSRRCYAVLQLRQALGTRRLVAIRGAGRRVQIFRLLGRNYLQRTLARNHLQALVHTRQAYPPKTMPCTLMLATPRPSGGVKAILQTV-----------PDSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQMECRVACTVELLWDVDLAVLGMELNVDGKLPLLPASTRPGAGGNPTVDGVLRNSANGYSIGTNSRVVGGGSPARLPFMHAVAAGAHWMLA--PVMRVFGGSGQRVGGHVNRVPPPSQSNPQXXXXXXXXXXXXXXXS-------------------GDAGVAG----------------------------GRMIFSGVSGQVAGPVV--GGTG-MSNGGGGTTWTSGLGRRKS-VLLAGGAVGFGGNGSEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTAPRVVGSGSRSVFKTAPGDCYFRVGSGVPALVPGAVRGTDGPSVRAAEVAAGGGGG---------------------------DGRRAWPSVRDSVPAGRCSLAVVIRGGEGAAGEIGDAAAGWRHRPTHRVAWQVVLLVQLKEQDAE-DGVPPQ-APSAQLLRHLVAVSKGEQGDAEAVYSFAEVFGAGDEQNDARSD-----------TDDQGGDDNIQAGREVSGALLPSLS-------AGGGEADRRSG----GRVEEPPEECVICLTDPKDTLLLPCRHLCVCSECFRHVDKCPVCRSAFDNYIVIQS 662
            ++QPPETQN+F+ +SIFV  +W++N SRRC+AV+QLR+ALG+RRLVAIRGAGRRV+IFRLLGRNY           ALVHTRQAYPPKTMPC+L++A+    GGVKAIL              P    XXXXXXXXXXXXX                + ++CR+ACTVELLWDVDL +LG E+ +  KL    A+    A  +PT         + + +G      GGG  + L  +     G  W  A     R+F    +R G  V   PP S S P XXXXXXXXXXXXXXX                    G  GV G                            G      V   + GP     GTG + +GG G +W + LG RKS V  AGG  G    G             XXXXXXXXXXXXXX       KRT PR + +G   VF T PG+ YFR          GA   T   +  AA+V  G GGG                            G R WP V D V AGRCSLA+VIR    AAGE      GWRHRPTHRV  Q+  LVQL E+ A  DG P Q APSA+ LRHLVA+SKG  GD E++YSFAEVFGA DE   A              T D G    +                      +   +A R +G    G  EE PEECVICLTDPK+TLLLPCRHLCVC+ECFRHVDKCPVCRSAFDNYIV+ +
Sbjct:    8 VIQPPETQNVFLCLSIFVGFLWIVNSSRRCWAVVQLRRALGSRRLVAIRGAGRRVRIFRLLGRNYXXXXXXXXXXXALVHTRQAYPPKTMPCSLLVASD--PGGVKAILHPRDSDDNIPVDPRPPXXXXXXXXXXXXXXXXGALGARAEAGPLVGVSVVLDCRIACTVELLWDVDLTLLGREMGLHPKLRT--AAGAAAASSSPT---------DRFDVG------GGGGLSSLSSL----PGNAWASAVSASRRLFRAGRERWGSRVAGAPPESSSRPSXXXXXXXXXXXXXXXXXXXXXXXXXYPSNNVDEEMGGRGVGGALGXXXXXXXXXXXXXXXXXXXXXXXXXGASAAEAVLASLDGPGARRAGTGNVGSGGAGRSWAASLGLRKSSVFNAGGEDGSDTAGVGWTVGQALGLGGXXXXXXXXXXXXXXGIMGLCGKRTVPRALSAGRGRVFTTLPGESYFRGRQQGGEWNAGA---TATSAAGAAKVGGGRGGGVDVRXXXXXXXXXXXXXXXXGAGERPAAGGRDWPRVGDPVRAGRCSLAIVIRP---AAGEETGDWVGWRHRPTHRVTRQI-WLVQLTERSAGVDGAPSQQAPSARCLRHLVAMSKGGDGDPESIYSFAEVFGASDEAGGAARPGLASNIGSIQATVDGGSSSTVXXXXXXXXXXXXXXXXXXXXXXSNPAQASRGAGAGGLGAGEEVPEECVICLTDPKNTLLLPCRHLCVCTECFRHVDKCPVCRSAFDNYIVLSA 735          
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Match: A0A7S2AX55_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AX55_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.040e-17
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0
Query:  602 DRRSGGRVEEPPEECVICLTDPKDTLLLPCRHLCVCSECFRHVDKCPVCRSAFDNYIV 659
            +R + G++++  EEC ICLT+PKDT LLPCRHLCVCS CF+ +DKCPVCR+ F+ YIV
Sbjct:   58 ERDTEGKMDQ-SEECTICLTEPKDTTLLPCRHLCVCSTCFKQIDKCPVCRAPFETYIV 114          
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Match: A0A835Z5X0_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X0_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 8.620e-17
Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 0
Query:  607 GRVEEPPEECVICLTDPKDTLLLPCRHLCVCSECFRHVDKCPVCRSAFDNYIVI 660
            G  +E   +CVICLT+ K  +LLPCRHLCVC  CFRH+DKCPVCRSAFDNY+ +
Sbjct:    9 GLEDESGSDCVICLTEEKAFMLLPCRHLCVCKACFRHIDKCPVCRSAFDNYLQV 62          
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Match: A0A7S2XYA7_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 4.610e-16
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query:  590 LLPSLSAGGG--EADRRSGGRVEEPPEECVICLTDPKDTLLLPCRHLCVCSECFRHVDKCPVCRSAFDNYIVIQSTETAE 667
            L P+L+  G      +  GG  E   +EC +CLTDPKD  LLPCRH+CVC ECFRH+ +CPVCRS F++Y+    ++  E
Sbjct:  152 LPPALALAGSVHHQGQGQGGEDEGQADECTVCLTDPKDVALLPCRHVCVCRECFRHISRCPVCRSPFEDYLRFDQSKQGE 231          
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Match: A0A7S2SVW1_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVW1_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 9.280e-16
Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:  614 EECVICLTDPKDTLLLPCRHLCVCSECFRHVDKCPVCRSAFDNYIVIQSTETAEAPVSEP 673
            ++CV+CLT+ KDT+LLPCRHLCVC  CFR +DKCPVCR+ F+ Y+V          V EP
Sbjct:    4 QKCVVCLTEAKDTILLPCRHLCVCRHCFRQIDKCPVCRTPFETYMVFTDKPLGANEVPEP 63          
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Match: A0A7S1CHK6_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHK6_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.220e-14
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
Query:  610 EEPPEECVICLTDPKDTLLLPCRHLCVCSECFRHVDKCPVCRSAFDNYIVIQ 661
            EE   +C++C+T+ K  +LLPCRHLCVC ECF H+DKCPVCR+ +D Y+V Q
Sbjct:  111 EEDDMDCLVCMTEKKSVVLLPCRHLCVCQECFTHIDKCPVCRTVYDGYMVFQ 162          
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Match: A0A7S2SWX2_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SWX2_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.930e-14
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0
Query:  611 EPPEECVICLTDPKDTLLLPCRHLCVCSECFRHVDKCPVCRSAFDNYIVIQSTETAEAPVSEP 673
            E  EECV+CLT+ KDT+LLPCRHLCVC  CFR +DKCPVCR+ F+ Y+V          V EP
Sbjct:  468 EASEECVVCLTEAKDTILLPCRHLCVCRHCFRQIDKCPVCRTPFETYMVFTDKPLGANEVPEP 530          
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Match: A0A2C6KQT7_9APIC (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Cystoisospora suis TaxID=483139 RepID=A0A2C6KQT7_9APIC)

HSP 1 Score: 72.4 bits (176), Expect = 3.660e-12
Identity = 28/47 (59.57%), Postives = 38/47 (80.85%), Query Frame = 0
Query:  614 EECVICLTDPKDTLLLPCRHLCVCSECFR--HVDKCPVCRSAFDNYI 658
            +EC+IC+T+PKD +L PCRHLC+CS+C R  H +KCP+CRS F  Y+
Sbjct:    7 KECLICMTNPKDVMLYPCRHLCLCSDCLRSLHQEKCPICRSHFSAYV 53          
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Match: A0A7S3C5X0_9EUKA (RING-type E3 ubiquitin transferase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C5X0_9EUKA)

HSP 1 Score: 75.5 bits (184), Expect = 8.240e-12
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0
Query:  615 ECVICLTDPKDTLLLPCRHLCVCSECF-RHVDKCPVCRSAFDNYIVIQSTETAEAP 669
            +CVICLT+P+DT+LLPCRHLC+C  CF R  D+CPVCR+ F +Y+   + +T  +P
Sbjct:   86 DCVICLTEPRDTILLPCRHLCLCQACFERSDDRCPVCRAPFQSYLRFTTPDTEPSP 141          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2244.5973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQX1_ECTSI7.240e-10742.56RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A6H5K7X0_9PHAE1.720e-10043.67RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A7S2AX55_9STRA5.040e-1763.79RING-type E3 ubiquitin transferase n=1 Tax=Dictyoc... [more]
A0A835Z5X0_9STRA8.620e-1766.67RING-type E3 ubiquitin transferase n=1 Tax=Tribone... [more]
A0A7S2XYA7_9STRA4.610e-1648.75RING-type E3 ubiquitin transferase n=1 Tax=Fibroca... [more]
A0A7S2SVW1_9STRA9.280e-1656.67RING-type E3 ubiquitin transferase n=1 Tax=Rhizoch... [more]
A0A7S1CHK6_9STRA1.220e-1459.62RING-type E3 ubiquitin transferase n=1 Tax=Bicosoe... [more]
A0A7S2SWX2_9STRA3.930e-1458.73RING-type E3 ubiquitin transferase n=1 Tax=Rhizoch... [more]
A0A2C6KQT7_9APIC3.660e-1259.57RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A7S3C5X0_9EUKA8.240e-1255.36RING-type E3 ubiquitin transferase n=1 Tax=Haptoli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 616..650
e-value: 0.0086
score: 25.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 616..651
score: 11.604
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 614..655
e-value: 1.4E-12
score: 47.3
NoneNo IPR availablePANTHERPTHR22996MAHOGUNINcoord: 550..667
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..702
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..28
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 612..661
NoneNo IPR availableTMHMMTMhelixcoord: 28..45
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 600..661
e-value: 2.2E-15
score: 57.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2244contigH-paniculata_contig2244:807..19152 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2244.5973.1mRNA_H-paniculata_contig2244.5973.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2244 807..19152 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2244.5973.1 ID=prot_H-paniculata_contig2244.5973.1|Name=mRNA_H-paniculata_contig2244.5973.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=702bp
RRESRKQRRQGRKMSGKWRLMQPPETQNLFVGMSIFVAGIWMLNVSRRCY
AVLQLRQALGTRRLVAIRGAGRRVQIFRLLGRNYLQRTLARNHLQALVHT
RQAYPPKTMPCTLMLATPRPSGGVKAILQTVPDSAADSAAGGVMAGVDVG
GEGMGGGAGPLVGLVLQMECRVACTVELLWDVDLAVLGMELNVDGKLPLL
PASTRPGAGGNPTVDGVLRNSANGYSIGTNSRVVGGGSPARLPFMHAVAA
GAHWMLAPVMRVFGGSGQRVGGHVNRVPPPSQSNPQGGGEVDEETGGGAA
ASGDAGVAGGRMIFSGVSGQVAGPVVGGTGMSNGGGGTTWTSGLGRRKSV
LLAGGAVGFGGNGSEIGGTGRGVGDGCGTGGAARGTHGYGRAVGGWGKRT
APRVVGSGSRSVFKTAPGDCYFRVGSGVPALVPGAVRGTDGPSVRAAEVA
AGGGGGDGRRAWPSVRDSVPAGRCSLAVVIRGGEGAAGEIGDAAAGWRHR
PTHRVAWQVVLLVQLKEQDAEDGVPPQAPSAQLLRHLVAVSKGEQGDAEA
VYSFAEVFGAGDEQNDARSDTDDQGGDDNIQAGREVSGALLPSLSAGGGE
ADRRSGGRVEEPPEECVICLTDPKDTLLLPCRHLCVCSECFRHVDKCPVC
RSAFDNYIVIQSTETAEAPVSEPAVFSASSTAVGVVGTGGRNESVVVADG
GG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD